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The map label for this gene is ycfJ [C]

Identifier: 121609610

GI number: 121609610

Start: 2999506

End: 3000027

Strand: Direct

Name: ycfJ [C]

Synonym: Veis_2656

Alternate gene names: 121609610

Gene position: 2999506-3000027 (Clockwise)

Preceding gene: 121609609

Following gene: 121609612

Centisome position: 53.88

GC content: 71.46

Gene sequence:

>522_bases
ATGCAGTCAATGATCCGTTCTTGCTCCCGCTCTTGCATCCGTTGCGGCACCGTGGTCGGCGCGGCCGCCGTGCTGTGCAC
CCTGGCTGCCTGCGGCCATCAGCGCGCGGCCCCGCCAGCCACGTACCCGGGGGCTTATTCGATCCCCGCCCATCCGGCCG
GACCGGCGGCCACCGAATATGGCCGCATCGCCAACATCCAAATGCTGCCCGCCCGCCCTCGGCAGGGCCAGACTTCCGGG
GCCGGCGCGGTGCTGGGGGCGGTGGTCGGTGGCGTGCTGGGCAACCAGATTGGCGCGGGCACGGGTCGCGCAGCGGCCAC
GGCCGTGGGCGTTCTGGGCGGTGCGGTGGCCGGCGATGCGATCGAAAGCCGGCAGCAGCGCGAGGAATACGTCCCGGGGG
GCTATCGCCTGTTCGTCCAATTGGACCGAGGGGGCCAGCGCGCCTACGACGTGAGCAGCCCGGGCGATCTGCGCATCGGC
GACCGCGTGCGCCTGTACAACGGCCAAATCTCGCGCTGGTGA

Upstream 100 bases:

>100_bases
GGCCTGAGCGGCGGTGCCGGACGGCGCCGGCCTTGCGCGGCGGTGGTGGTCGACGCACGGCGGGCCGGCTCCCGTCGGGC
CGGATTTTCAGGAGGTCGAC

Downstream 100 bases:

>100_bases
TGGGCCGCCTGCCGGGCACGGCCCTCTGAGCCTGGCGCGCTGCGCGCACCACGACCGGGCCGCTCAGTGCTGCCGCGCAC
TGCCGGGCACCTGGGGCGGC

Product: 17 kDa surface antigen

Products: NA

Alternate protein names: 17 Kda Surface Antigen

Number of amino acids: Translated: 173; Mature: 173

Protein sequence:

>173_residues
MQSMIRSCSRSCIRCGTVVGAAAVLCTLAACGHQRAAPPATYPGAYSIPAHPAGPAATEYGRIANIQMLPARPRQGQTSG
AGAVLGAVVGGVLGNQIGAGTGRAAATAVGVLGGAVAGDAIESRQQREEYVPGGYRLFVQLDRGGQRAYDVSSPGDLRIG
DRVRLYNGQISRW

Sequences:

>Translated_173_residues
MQSMIRSCSRSCIRCGTVVGAAAVLCTLAACGHQRAAPPATYPGAYSIPAHPAGPAATEYGRIANIQMLPARPRQGQTSG
AGAVLGAVVGGVLGNQIGAGTGRAAATAVGVLGGAVAGDAIESRQQREEYVPGGYRLFVQLDRGGQRAYDVSSPGDLRIG
DRVRLYNGQISRW
>Mature_173_residues
MQSMIRSCSRSCIRCGTVVGAAAVLCTLAACGHQRAAPPATYPGAYSIPAHPAGPAATEYGRIANIQMLPARPRQGQTSG
AGAVLGAVVGGVLGNQIGAGTGRAAATAVGVLGGAVAGDAIESRQQREEYVPGGYRLFVQLDRGGQRAYDVSSPGDLRIG
DRVRLYNGQISRW

Specific function: Unknown

COG id: COG3134

COG function: function code S; Predicted outer membrane lipoprotein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17723; Mature: 17723

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSMIRSCSRSCIRCGTVVGAAAVLCTLAACGHQRAAPPATYPGAYSIPAHPAGPAATEY
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GRIANIQMLPARPRQGQTSGAGAVLGAVVGGVLGNQIGAGTGRAAATAVGVLGGAVAGDA
CCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
IESRQQREEYVPGGYRLFVQLDRGGQRAYDVSSPGDLRIGDRVRLYNGQISRW
HHHHHHHHHHCCCCEEEEEEECCCCCEEECCCCCCCEEECCEEEEECCCCCCC
>Mature Secondary Structure
MQSMIRSCSRSCIRCGTVVGAAAVLCTLAACGHQRAAPPATYPGAYSIPAHPAGPAATEY
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GRIANIQMLPARPRQGQTSGAGAVLGAVVGGVLGNQIGAGTGRAAATAVGVLGGAVAGDA
CCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
IESRQQREEYVPGGYRLFVQLDRGGQRAYDVSSPGDLRIGDRVRLYNGQISRW
HHHHHHHHHHCCCCEEEEEEECCCCCEEECCCCCCCEEECCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA