| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
Click here to switch to the map view.
The map label for this gene is 121609601
Identifier: 121609601
GI number: 121609601
Start: 2990675
End: 2991178
Strand: Direct
Name: 121609601
Synonym: Veis_2647
Alternate gene names: NA
Gene position: 2990675-2991178 (Clockwise)
Preceding gene: 121609599
Following gene: 121609602
Centisome position: 53.72
GC content: 71.23
Gene sequence:
>504_bases ATGCGAGTGCGCACCGCCGAACCATCCGCCGCCGACAGCGCAGGCCCTGCGGCAGGTTGCTGGAAACTGAGCCCGGGCCA TGCCCTGTCGCTGCACCCGTGCAGCGCCGGTGTGCTGGAGATCGTCCAAGGGCGCGTCTGGTCGACCCTGCGCGGCACGC TCGAACAACCGCCGGATGACCATGTCTTGCAAGCCGGCGCGCGCCTGCATGTCGAGCCGGGGCAGCATCTGGTGCTGCAG GCGTGGAACCCGCCAGGCGTCACCGATGCCGTGGCGTTCCGCTGGGATGTGATGCCGGGCGCTGGCGCATTACCGGTCGG GGCGGGCAGCAGCGCCGCCACGGACTGGGAATGCGGCGTACTCCAGCCGCTGCGCGACTTGGCGCAGGCACTGGACCAGG GTGGGCGCGCCGCAGGGCGGCTGCTGGCCGGCATCGCCCGTTGGGCGCTGCAACGCAAAACCCGGCACCGGCAGGTCGCG GCCAAGTATTTCAGCACGGGGTGA
Upstream 100 bases:
>100_bases TAGCGTAGCGCGTTTTCATTGGACGGCGGGCCGGGGCAAACGCAGCATGGGTGCGATGGAAACAGGAACTGGCAGGAATT TTTGTCCCAAGGAGAGAGCC
Downstream 100 bases:
>100_bases GCCGCACGGGGTAACTGCACGGGATGGACTGCGGCACGCAGCGTTCGTCAGCCTATCCAGGCCACGCATGACGCTGGCGC GAGCTGGCGTTCGGGCCTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 167; Mature: 167
Protein sequence:
>167_residues MRVRTAEPSAADSAGPAAGCWKLSPGHALSLHPCSAGVLEIVQGRVWSTLRGTLEQPPDDHVLQAGARLHVEPGQHLVLQ AWNPPGVTDAVAFRWDVMPGAGALPVGAGSSAATDWECGVLQPLRDLAQALDQGGRAAGRLLAGIARWALQRKTRHRQVA AKYFSTG
Sequences:
>Translated_167_residues MRVRTAEPSAADSAGPAAGCWKLSPGHALSLHPCSAGVLEIVQGRVWSTLRGTLEQPPDDHVLQAGARLHVEPGQHLVLQ AWNPPGVTDAVAFRWDVMPGAGALPVGAGSSAATDWECGVLQPLRDLAQALDQGGRAAGRLLAGIARWALQRKTRHRQVA AKYFSTG >Mature_167_residues MRVRTAEPSAADSAGPAAGCWKLSPGHALSLHPCSAGVLEIVQGRVWSTLRGTLEQPPDDHVLQAGARLHVEPGQHLVLQ AWNPPGVTDAVAFRWDVMPGAGALPVGAGSSAATDWECGVLQPLRDLAQALDQGGRAAGRLLAGIARWALQRKTRHRQVA AKYFSTG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17576; Mature: 17576
Theoretical pI: Translated: 8.95; Mature: 8.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVRTAEPSAADSAGPAAGCWKLSPGHALSLHPCSAGVLEIVQGRVWSTLRGTLEQPPDD CCCCCCCCCCCCCCCCCCCEEECCCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCH HVLQAGARLHVEPGQHLVLQAWNPPGVTDAVAFRWDVMPGAGALPVGAGSSAATDWECGV HHHHCCCEEEECCCCEEEEEECCCCCCCCHHEEEEECCCCCCCCCCCCCCCCCCCCCCCH LQPLRDLAQALDQGGRAAGRLLAGIARWALQRKTRHRQVAAKYFSTG HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRVRTAEPSAADSAGPAAGCWKLSPGHALSLHPCSAGVLEIVQGRVWSTLRGTLEQPPDD CCCCCCCCCCCCCCCCCCCEEECCCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCH HVLQAGARLHVEPGQHLVLQAWNPPGVTDAVAFRWDVMPGAGALPVGAGSSAATDWECGV HHHHCCCEEEECCCCEEEEEECCCCCCCCHHEEEEECCCCCCCCCCCCCCCCCCCCCCCH LQPLRDLAQALDQGGRAAGRLLAGIARWALQRKTRHRQVAAKYFSTG HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA