Click here to switch to the map view.

The map label for this gene is fliY [H]

Identifier: 121609557

GI number: 121609557

Start: 2943224

End: 2944021

Strand: Direct

Name: fliY [H]

Synonym: Veis_2601

Alternate gene names: 121609557

Gene position: 2943224-2944021 (Clockwise)

Preceding gene: 121609556

Following gene: 121609558

Centisome position: 52.87

GC content: 63.16

Gene sequence:

>798_bases
ATGACTTCGACATTCCCTTCCCGCGTCTGGCGCGCGCTCGCGGCCGTGCTGCTGCTTGCCGCCGCGCACGCGGCCGGCGC
AGTCACCGTCGACGAGATCATCAAGCGCGGCAAACTGCTGGTGGCCATCGACACCAACAATCCGCCATGGGGACAGATGA
ATGCCTCGATGCAGCCCGAAGGCATCGATGTCGGCGTGGCGAATCTGATGGCCAAGTACATGGGCGTGCCGCTCGAGATC
GTGCCGGTCACCAGCCAGAACCGCATTCCGTTCATCGTCACCGGCAAGGCCGATGTGGTGATGGCCACTCTGACGATCAC
GCCCCAGCGCGCGTTGCAGATCTGGTACTCCATCCCGTATGCCTTGCAGGACAGCGTCATCATGACCACCGACAACAGTC
CGATCAAGAGTTTCGATGACCTCAACGGCAAGCGCGTGTCGGTCGTGCGCGGCGCGATCCAGGATGCCCTGGTCACCCGC
ATGGCCCCGCGCGCGCAGATGCAGCGTTTCGACAACGACGCCTCGACGATCCAGGCGCTGGTCGCCGGGCAGGTCGATGC
GAGCGCCACCGGCTTTCTCATTCCGGCGCAGACGACCAAGGCCAACCCGGGCAAGACCTATGTGTCGCGCCTGAAACTCG
GCACGCAGCACATCGGCATCGGCATGAAGCGCAACAGCCCCGACCTGCTGCAGTGGACCAACACCTTCATCTACCATATC
CGTGCCAACGGCGAACTCTCGGACCTGTTCAAGCAGTACTTCGGCATGCCGCTGCCAAACGACATGCCCTCGTTCTGA

Upstream 100 bases:

>100_bases
GCTGGACCATCCCGCGACGCAGCCACTGCAGCAGTTCGTCCAATCCATACGCCACAAGGGCTGAACGCCCGCGCCGTTTT
CATCGCAAGGAGACAAACCA

Downstream 100 bases:

>100_bases
GCCCAGTGACCGCATACCGCCATCCTGCGCGCACGGCGCGCGCCACCTGCATCGGCATGAGCGCCGAACCCATGGTCCGT
GAGGTGCTGGCGCGTGTCGG

Product: extracellular solute-binding protein

Products: NA

Alternate protein names: CBP; Protein fliY; Sulfate starvation-induced protein 7; SSI7 [H]

Number of amino acids: Translated: 265; Mature: 264

Protein sequence:

>265_residues
MTSTFPSRVWRALAAVLLLAAAHAAGAVTVDEIIKRGKLLVAIDTNNPPWGQMNASMQPEGIDVGVANLMAKYMGVPLEI
VPVTSQNRIPFIVTGKADVVMATLTITPQRALQIWYSIPYALQDSVIMTTDNSPIKSFDDLNGKRVSVVRGAIQDALVTR
MAPRAQMQRFDNDASTIQALVAGQVDASATGFLIPAQTTKANPGKTYVSRLKLGTQHIGIGMKRNSPDLLQWTNTFIYHI
RANGELSDLFKQYFGMPLPNDMPSF

Sequences:

>Translated_265_residues
MTSTFPSRVWRALAAVLLLAAAHAAGAVTVDEIIKRGKLLVAIDTNNPPWGQMNASMQPEGIDVGVANLMAKYMGVPLEI
VPVTSQNRIPFIVTGKADVVMATLTITPQRALQIWYSIPYALQDSVIMTTDNSPIKSFDDLNGKRVSVVRGAIQDALVTR
MAPRAQMQRFDNDASTIQALVAGQVDASATGFLIPAQTTKANPGKTYVSRLKLGTQHIGIGMKRNSPDLLQWTNTFIYHI
RANGELSDLFKQYFGMPLPNDMPSF
>Mature_264_residues
TSTFPSRVWRALAAVLLLAAAHAAGAVTVDEIIKRGKLLVAIDTNNPPWGQMNASMQPEGIDVGVANLMAKYMGVPLEIV
PVTSQNRIPFIVTGKADVVMATLTITPQRALQIWYSIPYALQDSVIMTTDNSPIKSFDDLNGKRVSVVRGAIQDALVTRM
APRAQMQRFDNDASTIQALVAGQVDASATGFLIPAQTTKANPGKTYVSRLKLGTQHIGIGMKRNSPDLLQWTNTFIYHIR
ANGELSDLFKQYFGMPLPNDMPSF

Specific function: Part of a binding-protein-dependent transport system for cystine [H]

COG id: COG0834

COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 3 family [H]

Homologues:

Organism=Escherichia coli, GI1788228, Length=246, Percent_Identity=24.390243902439, Blast_Score=89, Evalue=2e-19,
Organism=Escherichia coli, GI1788649, Length=232, Percent_Identity=26.2931034482759, Blast_Score=78, Evalue=5e-16,
Organism=Escherichia coli, GI1787085, Length=221, Percent_Identity=22.1719457013575, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1788648, Length=226, Percent_Identity=24.7787610619469, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI1787088, Length=218, Percent_Identity=22.9357798165138, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1787031, Length=247, Percent_Identity=25.9109311740891, Blast_Score=65, Evalue=6e-12,

Paralogues:

None

Copy number: 1920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1060 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015683
- InterPro:   IPR001638
- InterPro:   IPR018313 [H]

Pfam domain/function: PF00497 SBP_bac_3 [H]

EC number: NA

Molecular weight: Translated: 28873; Mature: 28742

Theoretical pI: Translated: 9.97; Mature: 9.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSTFPSRVWRALAAVLLLAAAHAAGAVTVDEIIKRGKLLVAIDTNNPPWGQMNASMQPE
CCCCCHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHCCCEEEEEECCCCCCCCCCCCCCCC
GIDVGVANLMAKYMGVPLEIVPVTSQNRIPFIVTGKADVVMATLTITPQRALQIWYSIPY
CCCCCHHHHHHHHHCCCEEEEEECCCCCCCEEEECCCCEEEEEEEECHHHHHHHHHHCCH
ALQDSVIMTTDNSPIKSFDDLNGKRVSVVRGAIQDALVTRMAPRAQMQRFDNDASTIQAL
HHCCCEEEEECCCCCCHHHCCCCCEEHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHH
VAGQVDASATGFLIPAQTTKANPGKTYVSRLKLGTQHIGIGMKRNSPDLLQWTNTFIYHI
HHCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHCHHHHEECCCCCCCHHHEECCEEEEEE
RANGELSDLFKQYFGMPLPNDMPSF
ECCCCHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
TSTFPSRVWRALAAVLLLAAAHAAGAVTVDEIIKRGKLLVAIDTNNPPWGQMNASMQPE
CCCCHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHCCCEEEEEECCCCCCCCCCCCCCCC
GIDVGVANLMAKYMGVPLEIVPVTSQNRIPFIVTGKADVVMATLTITPQRALQIWYSIPY
CCCCCHHHHHHHHHCCCEEEEEECCCCCCCEEEECCCCEEEEEEEECHHHHHHHHHHCCH
ALQDSVIMTTDNSPIKSFDDLNGKRVSVVRGAIQDALVTRMAPRAQMQRFDNDASTIQAL
HHCCCEEEEECCCCCCHHHCCCCCEEHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHH
VAGQVDASATGFLIPAQTTKANPGKTYVSRLKLGTQHIGIGMKRNSPDLLQWTNTFIYHI
HHCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHCHHHHEECCCCCCCHHHEECCEEEEEE
RANGELSDLFKQYFGMPLPNDMPSF
ECCCCHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]