| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is 121609500
Identifier: 121609500
GI number: 121609500
Start: 2874544
End: 2875371
Strand: Direct
Name: 121609500
Synonym: Veis_2544
Alternate gene names: NA
Gene position: 2874544-2875371 (Clockwise)
Preceding gene: 121609499
Following gene: 121609501
Centisome position: 51.64
GC content: 62.08
Gene sequence:
>828_bases TTGAATCACCGGTTCCTTTCGACGCTGCTCGGCCTGGCCCTGGCCGTCCCACTGCCTCTTGCGGCAGTGGCCGAGGAGCG CACAGACCCCTTGGCGCCCTACGCGTCGAAGATCACCCTCACCCCTGACCCCAAGGCGGCCGAGATCATCCGCGCAGCGG ATCGGATCCGGTTCCCGGAGAAGCCGTTTCGCTACCTCCTGGACCTGGTCGAGATGAATGGCGAGACCGTGGTGACGCAG CAGCGGCTGGATGTCGCCATGCGGGTTTCCAAGCCGACGGGGGAGCGCCAGGGCGATGTCAAAGCGCTGGTTCGCTTTCT GGAGCCGCAGAAGGACCAGGGCAAGGCCCTGCTGTCCAACCTGGACAAACTGTGGTTCTACGACCCGCGCCTGAAGCGCC CCATCCCGATCGCACGGCAGCAGCGGCTCATCGGGCAGGTGTCCAACGGCGACATCGTTGCCGCCGATTTCGACCTGAGC TACGCCTCGGCGATCCTCGGCAAGGAGCCCTGCGGAATCGTCGAGTGTTACAAGATCGCGCTCGAACGCCGATGGCAGTT CGTGACCTACCCGAAAGTCACCTACTGGGTCGAAGTGGAAAGCAAGAGGCCTTTCAAGTCGGAGTTCATGTCGACCAACG ACCTGATCCTGAAAACCGCTTTCTACAAGGACTACAAATCGGCTTTGGGGCGTGACCGACCGAGCGAGATCGTCATCGTC GACGCGCTCCAGAAGAACCACTTCACGAGGATGATCTATTCTGGCGCCCGGTTCGAGGACACGCCCGATGTCTATTTCCA GCGCGAGTACCTGGAGAGGCTCCGGTGA
Upstream 100 bases:
>100_bases CCTCCAAGGCCGCCTCCGCCGTGCGCGGCGAAGTGCTTGTCGCGGACGCCGGCGTGTCCATTGGCATCTGATGGCCGACG ACTTTTCAGGAGGAAGTATC
Downstream 100 bases:
>100_bases AAACTGCGGCATCCTCGCTTCGACCAGCAGCACTAGTGTCGCGTCACCGATCATCTGTCGGTCTGCGCTGGCCATCGAAG CGCATCGCGGCGTTGCATCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 275; Mature: 275
Protein sequence:
>275_residues MNHRFLSTLLGLALAVPLPLAAVAEERTDPLAPYASKITLTPDPKAAEIIRAADRIRFPEKPFRYLLDLVEMNGETVVTQ QRLDVAMRVSKPTGERQGDVKALVRFLEPQKDQGKALLSNLDKLWFYDPRLKRPIPIARQQRLIGQVSNGDIVAADFDLS YASAILGKEPCGIVECYKIALERRWQFVTYPKVTYWVEVESKRPFKSEFMSTNDLILKTAFYKDYKSALGRDRPSEIVIV DALQKNHFTRMIYSGARFEDTPDVYFQREYLERLR
Sequences:
>Translated_275_residues MNHRFLSTLLGLALAVPLPLAAVAEERTDPLAPYASKITLTPDPKAAEIIRAADRIRFPEKPFRYLLDLVEMNGETVVTQ QRLDVAMRVSKPTGERQGDVKALVRFLEPQKDQGKALLSNLDKLWFYDPRLKRPIPIARQQRLIGQVSNGDIVAADFDLS YASAILGKEPCGIVECYKIALERRWQFVTYPKVTYWVEVESKRPFKSEFMSTNDLILKTAFYKDYKSALGRDRPSEIVIV DALQKNHFTRMIYSGARFEDTPDVYFQREYLERLR >Mature_275_residues MNHRFLSTLLGLALAVPLPLAAVAEERTDPLAPYASKITLTPDPKAAEIIRAADRIRFPEKPFRYLLDLVEMNGETVVTQ QRLDVAMRVSKPTGERQGDVKALVRFLEPQKDQGKALLSNLDKLWFYDPRLKRPIPIARQQRLIGQVSNGDIVAADFDLS YASAILGKEPCGIVECYKIALERRWQFVTYPKVTYWVEVESKRPFKSEFMSTNDLILKTAFYKDYKSALGRDRPSEIVIV DALQKNHFTRMIYSGARFEDTPDVYFQREYLERLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31634; Mature: 31634
Theoretical pI: Translated: 9.50; Mature: 9.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNHRFLSTLLGLALAVPLPLAAVAEERTDPLAPYASKITLTPDPKAAEIIRAADRIRFPE CCHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCEEEECCCCHHHHHHHHHHHCCCCC KPFRYLLDLVEMNGETVVTQQRLDVAMRVSKPTGERQGDVKALVRFLEPQKDQGKALLSN HHHHHHHHHHHCCCCEEEHHHHHHHHEEECCCCCCCCCHHHHHHHHHCCCCCCHHHHHHH LDKLWFYDPRLKRPIPIARQQRLIGQVSNGDIVAADFDLSYASAILGKEPCGIVECYKIA HHHHEEECCCCCCCCCHHHHHHHHHCCCCCCEEEEECCHHHHHHHHCCCCCCHHHHHHHH LERRWQFVTYPKVTYWVEVESKRPFKSEFMSTNDLILKTAFYKDYKSALGRDRPSEIVIV HHHCCEEEECCCEEEEEEECCCCCHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEE DALQKNHFTRMIYSGARFEDTPDVYFQREYLERLR EEHHCCHHHHHHHCCCCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure MNHRFLSTLLGLALAVPLPLAAVAEERTDPLAPYASKITLTPDPKAAEIIRAADRIRFPE CCHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCEEEECCCCHHHHHHHHHHHCCCCC KPFRYLLDLVEMNGETVVTQQRLDVAMRVSKPTGERQGDVKALVRFLEPQKDQGKALLSN HHHHHHHHHHHCCCCEEEHHHHHHHHEEECCCCCCCCCHHHHHHHHHCCCCCCHHHHHHH LDKLWFYDPRLKRPIPIARQQRLIGQVSNGDIVAADFDLSYASAILGKEPCGIVECYKIA HHHHEEECCCCCCCCCHHHHHHHHHCCCCCCEEEEECCHHHHHHHHCCCCCCHHHHHHHH LERRWQFVTYPKVTYWVEVESKRPFKSEFMSTNDLILKTAFYKDYKSALGRDRPSEIVIV HHHCCEEEECCCEEEEEEECCCCCHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEE DALQKNHFTRMIYSGARFEDTPDVYFQREYLERLR EEHHCCHHHHHHHCCCCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA