Definition Verminephrobacter eiseniae EF01-2 chromosome, complete genome.
Accession NC_008786
Length 5,566,749

Click here to switch to the map view.

The map label for this gene is 121609500

Identifier: 121609500

GI number: 121609500

Start: 2874544

End: 2875371

Strand: Direct

Name: 121609500

Synonym: Veis_2544

Alternate gene names: NA

Gene position: 2874544-2875371 (Clockwise)

Preceding gene: 121609499

Following gene: 121609501

Centisome position: 51.64

GC content: 62.08

Gene sequence:

>828_bases
TTGAATCACCGGTTCCTTTCGACGCTGCTCGGCCTGGCCCTGGCCGTCCCACTGCCTCTTGCGGCAGTGGCCGAGGAGCG
CACAGACCCCTTGGCGCCCTACGCGTCGAAGATCACCCTCACCCCTGACCCCAAGGCGGCCGAGATCATCCGCGCAGCGG
ATCGGATCCGGTTCCCGGAGAAGCCGTTTCGCTACCTCCTGGACCTGGTCGAGATGAATGGCGAGACCGTGGTGACGCAG
CAGCGGCTGGATGTCGCCATGCGGGTTTCCAAGCCGACGGGGGAGCGCCAGGGCGATGTCAAAGCGCTGGTTCGCTTTCT
GGAGCCGCAGAAGGACCAGGGCAAGGCCCTGCTGTCCAACCTGGACAAACTGTGGTTCTACGACCCGCGCCTGAAGCGCC
CCATCCCGATCGCACGGCAGCAGCGGCTCATCGGGCAGGTGTCCAACGGCGACATCGTTGCCGCCGATTTCGACCTGAGC
TACGCCTCGGCGATCCTCGGCAAGGAGCCCTGCGGAATCGTCGAGTGTTACAAGATCGCGCTCGAACGCCGATGGCAGTT
CGTGACCTACCCGAAAGTCACCTACTGGGTCGAAGTGGAAAGCAAGAGGCCTTTCAAGTCGGAGTTCATGTCGACCAACG
ACCTGATCCTGAAAACCGCTTTCTACAAGGACTACAAATCGGCTTTGGGGCGTGACCGACCGAGCGAGATCGTCATCGTC
GACGCGCTCCAGAAGAACCACTTCACGAGGATGATCTATTCTGGCGCCCGGTTCGAGGACACGCCCGATGTCTATTTCCA
GCGCGAGTACCTGGAGAGGCTCCGGTGA

Upstream 100 bases:

>100_bases
CCTCCAAGGCCGCCTCCGCCGTGCGCGGCGAAGTGCTTGTCGCGGACGCCGGCGTGTCCATTGGCATCTGATGGCCGACG
ACTTTTCAGGAGGAAGTATC

Downstream 100 bases:

>100_bases
AAACTGCGGCATCCTCGCTTCGACCAGCAGCACTAGTGTCGCGTCACCGATCATCTGTCGGTCTGCGCTGGCCATCGAAG
CGCATCGCGGCGTTGCATCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 275; Mature: 275

Protein sequence:

>275_residues
MNHRFLSTLLGLALAVPLPLAAVAEERTDPLAPYASKITLTPDPKAAEIIRAADRIRFPEKPFRYLLDLVEMNGETVVTQ
QRLDVAMRVSKPTGERQGDVKALVRFLEPQKDQGKALLSNLDKLWFYDPRLKRPIPIARQQRLIGQVSNGDIVAADFDLS
YASAILGKEPCGIVECYKIALERRWQFVTYPKVTYWVEVESKRPFKSEFMSTNDLILKTAFYKDYKSALGRDRPSEIVIV
DALQKNHFTRMIYSGARFEDTPDVYFQREYLERLR

Sequences:

>Translated_275_residues
MNHRFLSTLLGLALAVPLPLAAVAEERTDPLAPYASKITLTPDPKAAEIIRAADRIRFPEKPFRYLLDLVEMNGETVVTQ
QRLDVAMRVSKPTGERQGDVKALVRFLEPQKDQGKALLSNLDKLWFYDPRLKRPIPIARQQRLIGQVSNGDIVAADFDLS
YASAILGKEPCGIVECYKIALERRWQFVTYPKVTYWVEVESKRPFKSEFMSTNDLILKTAFYKDYKSALGRDRPSEIVIV
DALQKNHFTRMIYSGARFEDTPDVYFQREYLERLR
>Mature_275_residues
MNHRFLSTLLGLALAVPLPLAAVAEERTDPLAPYASKITLTPDPKAAEIIRAADRIRFPEKPFRYLLDLVEMNGETVVTQ
QRLDVAMRVSKPTGERQGDVKALVRFLEPQKDQGKALLSNLDKLWFYDPRLKRPIPIARQQRLIGQVSNGDIVAADFDLS
YASAILGKEPCGIVECYKIALERRWQFVTYPKVTYWVEVESKRPFKSEFMSTNDLILKTAFYKDYKSALGRDRPSEIVIV
DALQKNHFTRMIYSGARFEDTPDVYFQREYLERLR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31634; Mature: 31634

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNHRFLSTLLGLALAVPLPLAAVAEERTDPLAPYASKITLTPDPKAAEIIRAADRIRFPE
CCHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCEEEECCCCHHHHHHHHHHHCCCCC
KPFRYLLDLVEMNGETVVTQQRLDVAMRVSKPTGERQGDVKALVRFLEPQKDQGKALLSN
HHHHHHHHHHHCCCCEEEHHHHHHHHEEECCCCCCCCCHHHHHHHHHCCCCCCHHHHHHH
LDKLWFYDPRLKRPIPIARQQRLIGQVSNGDIVAADFDLSYASAILGKEPCGIVECYKIA
HHHHEEECCCCCCCCCHHHHHHHHHCCCCCCEEEEECCHHHHHHHHCCCCCCHHHHHHHH
LERRWQFVTYPKVTYWVEVESKRPFKSEFMSTNDLILKTAFYKDYKSALGRDRPSEIVIV
HHHCCEEEECCCEEEEEEECCCCCHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEE
DALQKNHFTRMIYSGARFEDTPDVYFQREYLERLR
EEHHCCHHHHHHHCCCCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MNHRFLSTLLGLALAVPLPLAAVAEERTDPLAPYASKITLTPDPKAAEIIRAADRIRFPE
CCHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCEEEECCCCHHHHHHHHHHHCCCCC
KPFRYLLDLVEMNGETVVTQQRLDVAMRVSKPTGERQGDVKALVRFLEPQKDQGKALLSN
HHHHHHHHHHHCCCCEEEHHHHHHHHEEECCCCCCCCCHHHHHHHHHCCCCCCHHHHHHH
LDKLWFYDPRLKRPIPIARQQRLIGQVSNGDIVAADFDLSYASAILGKEPCGIVECYKIA
HHHHEEECCCCCCCCCHHHHHHHHHCCCCCCEEEEECCHHHHHHHHCCCCCCHHHHHHHH
LERRWQFVTYPKVTYWVEVESKRPFKSEFMSTNDLILKTAFYKDYKSALGRDRPSEIVIV
HHHCCEEEECCCEEEEEEECCCCCHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEE
DALQKNHFTRMIYSGARFEDTPDVYFQREYLERLR
EEHHCCHHHHHHHCCCCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA