Definition Verminephrobacter eiseniae EF01-2 chromosome, complete genome.
Accession NC_008786
Length 5,566,749

Click here to switch to the map view.

The map label for this gene is 121609373

Identifier: 121609373

GI number: 121609373

Start: 2731893

End: 2733608

Strand: Direct

Name: 121609373

Synonym: Veis_2416

Alternate gene names: NA

Gene position: 2731893-2733608 (Clockwise)

Preceding gene: 121609372

Following gene: 121609376

Centisome position: 49.08

GC content: 68.41

Gene sequence:

>1716_bases
ATGGCCAGCGCAGACCGACAGATGATCGGTGACGCGACACTAATCTACGACTACCTGGCCGAGACCACCATGTCCATCAT
GTCGCGGGCACGCAGCAGAAACCCTGCCCTGGGATACGCCACCGACTTCGTCGACGCAGCCATGGCTGCGCATCTGGCCG
AAATCCTCCAGCGCGGCATTCGGGTCGTGGCCAACGCCGGCGGACTGAACCCGCAGGCCTGCCGCGACGCATTGCTCGCG
GCGGCCGCACGGCAAGGGCTGCGGCCCAAGGTCGCGCTGGTGACGGGCGATGATGTCATGGCCTCGATGCCCGATTGGTG
CGCCAAGGGCCTCGATGACATGCACACCGGCGAGCCGGCGTCGCCCCATCTGATGTCGGCCAACGCCTACGTCGGCGCGC
AAGGCATCGCCCGCGCGCTGGACTGGGGGGCCGATGTCGTCATCACCGGCCGCTGCGTCGACAGCGCCGTGGTGGTGGGC
CCGCTCGTGCACGAATTCGGCTGGTCTTGGGACGACTGGGACCGGCTGGCCAGCGCCACCCTGGCGGGGCATGTGATCGA
GTGCGGCGCGCAGGCCACCGGCGGGCTGTTCACTGACTGGCAACTGGTGCAGGGATGGGATTGCATCGGCTATCCGGTGA
TCGACTGCGCCGACGATGGCAGTTTTGTGCTCTCCAAGCCGCAGGGATCTGGCGGCCTGATCCACCCGGCAGCCGTGGCC
GAGCAGATTCTGTACGAAGTGGGCGACCCGGGCGCGTACCTGATGCCTGATGTCACCTGCGATTTCCGGCATGTGCGCAC
CGAGGCGCTGGACACGGACCATGTATTCGTCAGCGGAGCGCGCGGGCGCCCTCCCGGCATGCACTACAAGTGCAATGGCA
CATGGCACGACGGCTACCAGATCGCCCTGGCGCTGGCGATTCGCGGCGTGGACGCGCCCCGCAAGGCGCAGCGCACCGCA
GACGCATTGCTTGCGCGCACGCGGCGAATGATGTTCGGCAAGGGCTACCCGGACTATGCCGCTACCAGCGTCGAACCCAT
AGGCTGCGAGGCCCTGTACGGCCCCAACGCCCGCGTGCTTGCCACCCGCGAAGTACTGCTGCGCCTGGCAGCGCGCCACC
CCGCAGCCGAGGCTTTGCAGTTTCTGCAGCGGGAATGCGCATCGGCGGGCACCTCGATGGCGGCCGGCACGCGCTCGGCG
CTGTTCGGGCGGGCCGATGTGCAGCAGGTGGTGAAAGTCTTTTCCTTCCTTGCGCCCAAGCGCGAGGTGCCGCTGACGGT
CAGCATGCAAGGGCGGCAGGAGCGTCTCGATGTCGCGGCGGCGGTGGGCGAAAACCCGCCGGCGCGCGCGTTGGCGCCGC
CCCAGCCATGGACTGCCCCTGGCGGCCCGGTGGTCAGCGTGCCGTTGATCACGCTGGCCTGGGCGCGCAGCGGTGACAAG
GGCGACGACGAGAACATCGGCGTCATTGCGCGCGAACCCCGCTACCTGCCGCTATTGCGCGCGCAACTCAGCGCCTGCGC
GGTGCGCGGCTGGTTCTCGCATCTGCTCGAAGGCGAGGTGGAGCGCTACGAGGTTCCCGGCCTGAACGCGCTGAATTTCG
TGCTGCACCAGGCGCTGGGGGCGGTGGTTCTGCCAGCCTGCGCTCTGATCCCCTCGGCAAGAGCTTTGCCCAGATGCTGC
TCGACTTCCCGCTGTCGGTGCCCGCAGCCTGGGTGA

Upstream 100 bases:

>100_bases
TGTCGTAGGCTGCGCGCAGCCATCGGAGCGCAGCGCAAGGCGCATCGCGCAGCCAATACCGAGCGTATTGGCAAGCGATG
CAACGCCGCGATGCGCTTCG

Downstream 100 bases:

>100_bases
GCTGAACAGGCCGCGCCCGCTCCCCGGCGGCAACAGCACCACGGGAACCGGCAGCCAGGACAGACCCAGGCATGTCGCAT
CTTCCAACACGCCATCGTGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 571; Mature: 570

Protein sequence:

>571_residues
MASADRQMIGDATLIYDYLAETTMSIMSRARSRNPALGYATDFVDAAMAAHLAEILQRGIRVVANAGGLNPQACRDALLA
AAARQGLRPKVALVTGDDVMASMPDWCAKGLDDMHTGEPASPHLMSANAYVGAQGIARALDWGADVVITGRCVDSAVVVG
PLVHEFGWSWDDWDRLASATLAGHVIECGAQATGGLFTDWQLVQGWDCIGYPVIDCADDGSFVLSKPQGSGGLIHPAAVA
EQILYEVGDPGAYLMPDVTCDFRHVRTEALDTDHVFVSGARGRPPGMHYKCNGTWHDGYQIALALAIRGVDAPRKAQRTA
DALLARTRRMMFGKGYPDYAATSVEPIGCEALYGPNARVLATREVLLRLAARHPAAEALQFLQRECASAGTSMAAGTRSA
LFGRADVQQVVKVFSFLAPKREVPLTVSMQGRQERLDVAAAVGENPPARALAPPQPWTAPGGPVVSVPLITLAWARSGDK
GDDENIGVIAREPRYLPLLRAQLSACAVRGWFSHLLEGEVERYEVPGLNALNFVLHQALGAVVLPACALIPSARALPRCC
STSRCRCPQPG

Sequences:

>Translated_571_residues
MASADRQMIGDATLIYDYLAETTMSIMSRARSRNPALGYATDFVDAAMAAHLAEILQRGIRVVANAGGLNPQACRDALLA
AAARQGLRPKVALVTGDDVMASMPDWCAKGLDDMHTGEPASPHLMSANAYVGAQGIARALDWGADVVITGRCVDSAVVVG
PLVHEFGWSWDDWDRLASATLAGHVIECGAQATGGLFTDWQLVQGWDCIGYPVIDCADDGSFVLSKPQGSGGLIHPAAVA
EQILYEVGDPGAYLMPDVTCDFRHVRTEALDTDHVFVSGARGRPPGMHYKCNGTWHDGYQIALALAIRGVDAPRKAQRTA
DALLARTRRMMFGKGYPDYAATSVEPIGCEALYGPNARVLATREVLLRLAARHPAAEALQFLQRECASAGTSMAAGTRSA
LFGRADVQQVVKVFSFLAPKREVPLTVSMQGRQERLDVAAAVGENPPARALAPPQPWTAPGGPVVSVPLITLAWARSGDK
GDDENIGVIAREPRYLPLLRAQLSACAVRGWFSHLLEGEVERYEVPGLNALNFVLHQALGAVVLPACALIPSARALPRCC
STSRCRCPQPG
>Mature_570_residues
ASADRQMIGDATLIYDYLAETTMSIMSRARSRNPALGYATDFVDAAMAAHLAEILQRGIRVVANAGGLNPQACRDALLAA
AARQGLRPKVALVTGDDVMASMPDWCAKGLDDMHTGEPASPHLMSANAYVGAQGIARALDWGADVVITGRCVDSAVVVGP
LVHEFGWSWDDWDRLASATLAGHVIECGAQATGGLFTDWQLVQGWDCIGYPVIDCADDGSFVLSKPQGSGGLIHPAAVAE
QILYEVGDPGAYLMPDVTCDFRHVRTEALDTDHVFVSGARGRPPGMHYKCNGTWHDGYQIALALAIRGVDAPRKAQRTAD
ALLARTRRMMFGKGYPDYAATSVEPIGCEALYGPNARVLATREVLLRLAARHPAAEALQFLQRECASAGTSMAAGTRSAL
FGRADVQQVVKVFSFLAPKREVPLTVSMQGRQERLDVAAAVGENPPARALAPPQPWTAPGGPVVSVPLITLAWARSGDKG
DDENIGVIAREPRYLPLLRAQLSACAVRGWFSHLLEGEVERYEVPGLNALNFVLHQALGAVVLPACALIPSARALPRCCS
TSRCRCPQPG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60892; Mature: 60761

Theoretical pI: Translated: 6.56; Mature: 6.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASADRQMIGDATLIYDYLAETTMSIMSRARSRNPALGYATDFVDAAMAAHLAEILQRGI
CCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
RVVANAGGLNPQACRDALLAAAARQGLRPKVALVTGDDVMASMPDWCAKGLDDMHTGEPA
HEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHCCCHHHHCCCCCCCCCCCC
SPHLMSANAYVGAQGIARALDWGADVVITGRCVDSAVVVGPLVHEFGWSWDDWDRLASAT
CCCEEECCCEECHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHH
LAGHVIECGAQATGGLFTDWQLVQGWDCIGYPVIDCADDGSFVLSKPQGSGGLIHPAAVA
HHHHHHHCCCCCCCCCCCCCHHHCCCCCCCCCEEEECCCCCEEEECCCCCCCCCCHHHHH
EQILYEVGDPGAYLMPDVTCDFRHVRTEALDTDHVFVSGARGRPPGMHYKCNGTWHDGYQ
HHHHHHCCCCCCEECCCCCCCHHHHHHHHCCCCCEEEECCCCCCCCCCEEECCCCCCCHH
IALALAIRGVDAPRKAQRTADALLARTRRMMFGKGYPDYAATSVEPIGCEALYGPNARVL
EEEEHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCEEEECCCCEEE
ATREVLLRLAARHPAAEALQFLQRECASAGTSMAAGTRSALFGRADVQQVVKVFSFLAPK
HHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHCCCHHHHHCHHHHHHHHHHHHHHCCC
REVPLTVSMQGRQERLDVAAAVGENPPARALAPPQPWTAPGGPVVSVPLITLAWARSGDK
CCCCEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHCCCCC
GDDENIGVIAREPRYLPLLRAQLSACAVRGWFSHLLEGEVERYEVPGLNALNFVLHQALG
CCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHEEECCCCHHHHHHHHHHHH
AVVLPACALIPSARALPRCCSTSRCRCPQPG
HHHHHHHHHCCCHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
ASADRQMIGDATLIYDYLAETTMSIMSRARSRNPALGYATDFVDAAMAAHLAEILQRGI
CCCCHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
RVVANAGGLNPQACRDALLAAAARQGLRPKVALVTGDDVMASMPDWCAKGLDDMHTGEPA
HEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHCCCHHHHCCCCCCCCCCCC
SPHLMSANAYVGAQGIARALDWGADVVITGRCVDSAVVVGPLVHEFGWSWDDWDRLASAT
CCCEEECCCEECHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHH
LAGHVIECGAQATGGLFTDWQLVQGWDCIGYPVIDCADDGSFVLSKPQGSGGLIHPAAVA
HHHHHHHCCCCCCCCCCCCCHHHCCCCCCCCCEEEECCCCCEEEECCCCCCCCCCHHHHH
EQILYEVGDPGAYLMPDVTCDFRHVRTEALDTDHVFVSGARGRPPGMHYKCNGTWHDGYQ
HHHHHHCCCCCCEECCCCCCCHHHHHHHHCCCCCEEEECCCCCCCCCCEEECCCCCCCHH
IALALAIRGVDAPRKAQRTADALLARTRRMMFGKGYPDYAATSVEPIGCEALYGPNARVL
EEEEHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCEEEECCCCEEE
ATREVLLRLAARHPAAEALQFLQRECASAGTSMAAGTRSALFGRADVQQVVKVFSFLAPK
HHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHCCCHHHHHCHHHHHHHHHHHHHHCCC
REVPLTVSMQGRQERLDVAAAVGENPPARALAPPQPWTAPGGPVVSVPLITLAWARSGDK
CCCCEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHCCCCC
GDDENIGVIAREPRYLPLLRAQLSACAVRGWFSHLLEGEVERYEVPGLNALNFVLHQALG
CCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHEEECCCCHHHHHHHHHHHH
AVVLPACALIPSARALPRCCSTSRCRCPQPG
HHHHHHHHHCCCHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA