| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is 121609369
Identifier: 121609369
GI number: 121609369
Start: 2726322
End: 2726843
Strand: Direct
Name: 121609369
Synonym: Veis_2412
Alternate gene names: NA
Gene position: 2726322-2726843 (Clockwise)
Preceding gene: 121609368
Following gene: 121609370
Centisome position: 48.98
GC content: 70.5
Gene sequence:
>522_bases ATGACGGCATCGTTGCATCGGCTGGAGGTCGTGCTCGACCTGTCCTCCATGGCCATCGTGCACGCCGCAGGCTACGCGGA AGTCGGCGGCGCGGGCTATGCCGAGGGCCTGCGCGACGGCCACGAGTTCATCGGGGCGGCCACGTGCCTGCGACGGGCCG GCAGGCCGCTGATCTTGCCCAAGGCCGGCGAAAGCGACTGCGGTTCCGAGGTGACGCAGTCGCACACCGCAGCGCTTGCG GGCAACCGCGTCATCTGCCGTGCGGCGTTTGCCCAACTTGGCGTGGTGCAGGCGCGGCACACGGTGCGCATGTACCGCCT GATGCAGGGCTTTCGCGGCAAGCCTGCGGCTGACGTGCAAGCGGCGGCGCCAGCCATTGCCTGCGTGCCCAGTGCCGCCA TGGCGCTCGGCCCGGCACTCACCGGGCTGGAAATCAATCCCTTGCCGGCCAGGCCGCAGGGCCAAGGCGTGATCGCCCTG GATGCCCTGCTGCGGACCACGGCCGACGAGACCGCGCCATGA
Upstream 100 bases:
>100_bases GTCCACATCGTGGACAAATGCGCACAAACCGATTGCGATGGCCGGGGGTTTCTTCTGAAATCACCCGACTGGTACCGGCA GAACGCTTTTGGAGACATCG
Downstream 100 bases:
>100_bases CACCCATCGAATCCCGAATCGACACCGCACAGGCCGCCTACGCCGAGCAGCGCCAGGGCATGCTGGCCCTGATCGAGCGC CTGCGGCAGTTGGAGCAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 173; Mature: 172
Protein sequence:
>173_residues MTASLHRLEVVLDLSSMAIVHAAGYAEVGGAGYAEGLRDGHEFIGAATCLRRAGRPLILPKAGESDCGSEVTQSHTAALA GNRVICRAAFAQLGVVQARHTVRMYRLMQGFRGKPAADVQAAAPAIACVPSAAMALGPALTGLEINPLPARPQGQGVIAL DALLRTTADETAP
Sequences:
>Translated_173_residues MTASLHRLEVVLDLSSMAIVHAAGYAEVGGAGYAEGLRDGHEFIGAATCLRRAGRPLILPKAGESDCGSEVTQSHTAALA GNRVICRAAFAQLGVVQARHTVRMYRLMQGFRGKPAADVQAAAPAIACVPSAAMALGPALTGLEINPLPARPQGQGVIAL DALLRTTADETAP >Mature_172_residues TASLHRLEVVLDLSSMAIVHAAGYAEVGGAGYAEGLRDGHEFIGAATCLRRAGRPLILPKAGESDCGSEVTQSHTAALAG NRVICRAAFAQLGVVQARHTVRMYRLMQGFRGKPAADVQAAAPAIACVPSAAMALGPALTGLEINPLPARPQGQGVIALD ALLRTTADETAP
Specific function: Unknown
COG id: COG1042
COG function: function code C; Acyl-CoA synthetase (NDP forming)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17792; Mature: 17661
Theoretical pI: Translated: 7.99; Mature: 7.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTASLHRLEVVLDLSSMAIVHAAGYAEVGGAGYAEGLRDGHEFIGAATCLRRAGRPLILP CCCCHHHHHHHHHHHHHHHHHHCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEE KAGESDCGSEVTQSHTAALAGNRVICRAAFAQLGVVQARHTVRMYRLMQGFRGKPAADVQ CCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH AAAPAIACVPSAAMALGPALTGLEINPLPARPQGQGVIALDALLRTTADETAP HHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCC >Mature Secondary Structure TASLHRLEVVLDLSSMAIVHAAGYAEVGGAGYAEGLRDGHEFIGAATCLRRAGRPLILP CCCHHHHHHHHHHHHHHHHHHCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEE KAGESDCGSEVTQSHTAALAGNRVICRAAFAQLGVVQARHTVRMYRLMQGFRGKPAADVQ CCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH AAAPAIACVPSAAMALGPALTGLEINPLPARPQGQGVIALDALLRTTADETAP HHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA