| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is 121609359
Identifier: 121609359
GI number: 121609359
Start: 2719265
End: 2719534
Strand: Direct
Name: 121609359
Synonym: Veis_2402
Alternate gene names: NA
Gene position: 2719265-2719534 (Clockwise)
Preceding gene: 121609358
Following gene: 121609360
Centisome position: 48.85
GC content: 71.11
Gene sequence:
>270_bases ATGCTGGCATTGCCCCCCGAACTCACCCAGCGCCAGGCCACGGCCTGCCTGCGCCTGCTGCTGCAAGGGCTGAAGGCGCA GCCAGAGCGCGCCGTGCGGGTCGATGCCAAGGCCCTGACGCGGTTTGACAGCACGGCCCTGGCGGTGCTGCTCGAATGCC GGCGCGCAGCGCTGTCCGAAGGCAGGGGCTTTGCGGTGCAAGACCTGCCGCTGGCGCTGGCGGGCATGGCGCGGCTTTAC GGCGTGGATGGGTTGCTCACGGGCGGGTAG
Upstream 100 bases:
>100_bases CGCGCAGCAGATCAACGCCAAGGGCGTGGACGGTCTGATCGACACGCTGGCCGCGCGCAACAAGGCCAATGCCGCCGCCA AGGGCGAATGATCCCGCGCC
Downstream 100 bases:
>100_bases TTGCCGCTGCTCCGCCTTGCAGATACGCCAAGCCCCGGCGCGTGCGCCATATGGCGGGAACATGGCGGGACATGGCGGAA ACATGACGGGAAAGTGGCCG
Product: sulfate transporter/antisigma-factor antagonist STAS
Products: NA
Alternate protein names: Anti-Sigma-Factor Antagonist Domain-Containing Protein; Sulfate Transporter/Antisigma-Factor Antagonist Stas; Signal Peptide Protein; Sulfate Transporter/Antisigma-Factor Antagonist
Number of amino acids: Translated: 89; Mature: 89
Protein sequence:
>89_residues MLALPPELTQRQATACLRLLLQGLKAQPERAVRVDAKALTRFDSTALAVLLECRRAALSEGRGFAVQDLPLALAGMARLY GVDGLLTGG
Sequences:
>Translated_89_residues MLALPPELTQRQATACLRLLLQGLKAQPERAVRVDAKALTRFDSTALAVLLECRRAALSEGRGFAVQDLPLALAGMARLY GVDGLLTGG >Mature_89_residues MLALPPELTQRQATACLRLLLQGLKAQPERAVRVDAKALTRFDSTALAVLLECRRAALSEGRGFAVQDLPLALAGMARLY GVDGLLTGG
Specific function: Unknown
COG id: COG3113
COG function: function code R; Predicted NTP binding protein (contains STAS domain)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9460; Mature: 9460
Theoretical pI: Translated: 9.50; Mature: 9.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLALPPELTQRQATACLRLLLQGLKAQPERAVRVDAKALTRFDSTALAVLLECRRAALSE CCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GRGFAVQDLPLALAGMARLYGVDGLLTGG CCCCCHHHHHHHHHHHHHHHCCCCEECCC >Mature Secondary Structure MLALPPELTQRQATACLRLLLQGLKAQPERAVRVDAKALTRFDSTALAVLLECRRAALSE CCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GRGFAVQDLPLALAGMARLYGVDGLLTGG CCCCCHHHHHHHHHHHHHHHCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA