| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is 121609351
Identifier: 121609351
GI number: 121609351
Start: 2708059
End: 2708778
Strand: Direct
Name: 121609351
Synonym: Veis_2394
Alternate gene names: NA
Gene position: 2708059-2708778 (Clockwise)
Preceding gene: 121609350
Following gene: 121609352
Centisome position: 48.65
GC content: 67.92
Gene sequence:
>720_bases ATGGGCCTGCGGCGAGCGCCACCCATGGCCCGTCTGCCGCGTCTGACCCTGCCGGGTTATTTGCACCATGTGATGCAAAG GGGCAACAACCGGCAGCCCCTGTTCGTGGATGGGGAAGATTTCCGGGCGCTGCTTGCGTTGCTGGCGGACAACGCCCCAC GATGTGGGGTCGCCGTCCATGCCTATGTGCTGATGGCCAACCATTTCCACCTGCTGCTCACCCCGGGCACGCAGGACGGC TTGCCGCAGCTGATGCAGGCCCTGGGGCGGCGCTATGTGCAGTATTTCAATCGCCGCCACGCGCGCACCGGCACCTTGTG GGAGGGGCGTTACCGCTCGACCCTGTTGCAGGCCGAGCGCTATCTGCTGCCTTGCATGGTGTACATGGATCTGAACCCCG TCAGGGCCGCGCTGGTGGCGCAGGCCGCCGACTACCCCTGGTCGAGCCATGCCCATTGGCGCGGTTTGCGCAACGACCGG CTGCTCACGCCCCATGCGCTGTACTGGGCGCTGGGCAATACGCCGTTCGCCCGCGAGGCGGCTTATGCGGCCCTGGTGCA GGCGGGTGTCGGAGCGCAGGAGCAGGCGGCGTTGACGGCTTCGGCGCTGAGCGGTTGGGCCTTGGGCGAGGCGGCATTCA TCGGCGATTTGCAAAAACGGACACCGCGCCGCGTCGCACCAGGGCGGTCGGGGCGGCCGCGCACAGCGTCAGGCACCTGA
Upstream 100 bases:
>100_bases CCGTTCACGGCCATGCCACGCTGATGCCCGCCGCGCCCGCAGGGCTTGCCGGCCTCTTTCGGCAGACCGCACACCGATTA CGACCCCGCCGATGGCCTGA
Downstream 100 bases:
>100_bases GGAATGGCTTCATGTGCTCGAAAGAACGGTGCCTTCTGCCATCTTTTTTGATATGTCCCCGATAAAAAAATAAAAACCAG CGCGCGATTTTTAATGGGTT
Product: hypothetical protein
Products: NA
Alternate protein names: Transposase And Inactivated Derivatives; Conserved Domain Protein; Transposase Of ISGbem_B; Transposase Family Protein; Transposase And Inactivated Derivatives Protein; Transposase-Like Protein; Transposase Or Inactivated Derivative; Methionine-R-Sulfoxide Reductase; Transposase Domain-Containing Protein
Number of amino acids: Translated: 239; Mature: 238
Protein sequence:
>239_residues MGLRRAPPMARLPRLTLPGYLHHVMQRGNNRQPLFVDGEDFRALLALLADNAPRCGVAVHAYVLMANHFHLLLTPGTQDG LPQLMQALGRRYVQYFNRRHARTGTLWEGRYRSTLLQAERYLLPCMVYMDLNPVRAALVAQAADYPWSSHAHWRGLRNDR LLTPHALYWALGNTPFAREAAYAALVQAGVGAQEQAALTASALSGWALGEAAFIGDLQKRTPRRVAPGRSGRPRTASGT
Sequences:
>Translated_239_residues MGLRRAPPMARLPRLTLPGYLHHVMQRGNNRQPLFVDGEDFRALLALLADNAPRCGVAVHAYVLMANHFHLLLTPGTQDG LPQLMQALGRRYVQYFNRRHARTGTLWEGRYRSTLLQAERYLLPCMVYMDLNPVRAALVAQAADYPWSSHAHWRGLRNDR LLTPHALYWALGNTPFAREAAYAALVQAGVGAQEQAALTASALSGWALGEAAFIGDLQKRTPRRVAPGRSGRPRTASGT >Mature_238_residues GLRRAPPMARLPRLTLPGYLHHVMQRGNNRQPLFVDGEDFRALLALLADNAPRCGVAVHAYVLMANHFHLLLTPGTQDGL PQLMQALGRRYVQYFNRRHARTGTLWEGRYRSTLLQAERYLLPCMVYMDLNPVRAALVAQAADYPWSSHAHWRGLRNDRL LTPHALYWALGNTPFAREAAYAALVQAGVGAQEQAALTASALSGWALGEAAFIGDLQKRTPRRVAPGRSGRPRTASGT
Specific function: Unknown
COG id: COG1943
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26541; Mature: 26410
Theoretical pI: Translated: 11.15; Mature: 11.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLRRAPPMARLPRLTLPGYLHHVMQRGNNRQPLFVDGEDFRALLALLADNAPRCGVAVH CCCCCCCCHHHCCCCCCCHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHCCCCCCHHHHH AYVLMANHFHLLLTPGTQDGLPQLMQALGRRYVQYFNRRHARTGTLWEGRYRSTLLQAER HHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEECCHHHHHHHHHHH YLLPCMVYMDLNPVRAALVAQAADYPWSSHAHWRGLRNDRLLTPHALYWALGNTPFAREA HHHHHHEEECCCHHHHHHHHHHCCCCCCCCCHHCCCCCCCCCCHHHHEEECCCCCCHHHH AYAALVQAGVGAQEQAALTASALSGWALGEAAFIGDLQKRTPRRVAPGRSGRPRTASGT HHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure GLRRAPPMARLPRLTLPGYLHHVMQRGNNRQPLFVDGEDFRALLALLADNAPRCGVAVH CCCCCCCHHHCCCCCCCHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHCCCCCCHHHHH AYVLMANHFHLLLTPGTQDGLPQLMQALGRRYVQYFNRRHARTGTLWEGRYRSTLLQAER HHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEECCHHHHHHHHHHH YLLPCMVYMDLNPVRAALVAQAADYPWSSHAHWRGLRNDRLLTPHALYWALGNTPFAREA HHHHHHEEECCCHHHHHHHHHHCCCCCCCCCHHCCCCCCCCCCHHHHEEECCCCCCHHHH AYAALVQAGVGAQEQAALTASALSGWALGEAAFIGDLQKRTPRRVAPGRSGRPRTASGT HHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA