| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120613331
Identifier: 120613331
GI number: 120613331
Start: 5243376
End: 5244377
Strand: Direct
Name: 120613331
Synonym: Aave_4700
Alternate gene names: NA
Gene position: 5243376-5244377 (Clockwise)
Preceding gene: 120613330
Following gene: 120613334
Centisome position: 97.96
GC content: 74.35
Gene sequence:
>1002_bases ATGCAGCACGCCACCGACACCACCGCCGCGCCGCTGCGCTTCGATCTCCCCAGGCCCGACCTCGGGGCCTGGCGGGCCGG CAACACCGGCACCGAAGGCGTCTGGCGCTTCGATTCCGGCCGGCCCGGACCGGACGTGCTGATCACCGCGCTCGTGCACG GCAACGAGCTGTGCGGCGCCTGGGCGCTGTGCGACCTGCTGGAGGCCGGCATCCGCCCCGAAGCAGGCCGGCTCACCCTG GCCTTCTGCAACCTGGCGGCTTTCGACCGCTTCGATCCGCAGGACCACGACGCATCGCGCTTCGTGGAAGAGGACATGAA CCGCCAGTGGAGCGACGACCGCCTGGATGCCGCGGACACGCGGGAGCGCCGCCGCGCCGCTGCGCTGCGCCCGTTCGTGC GCGAGGCCGGCTGGCTGCTCGACCTGCACTCCATGCACGAGCCCGGCGCACCGCTGCTGCTGACCGGCCCGCATGCGCGC AACCAGGCGCTGGCGCGGCGCATGGGCGCGCCAGAGTACGTGGTGGCCGATGCCGGCCACCAGGACGGTGTGCGCATGCG CGACTACGGCCGCTTCGGCCGGCCGGATGCCGATGAGGCGGGCCCCGACGGCACGCGCTCGCTGCTCGTCGAATGCGGCT TCCACGGCGACCCGGCGAGCCGCGCCGTGGCACGCGACCAGTGCGTGCGGTTCCTGGAGACGGCGGGCTCGCTGGACGCG GCCACGCTGGCGCGGGCCCTGCCCGGCTGGCGTCAACCCGATGCACCGCGACAGTGGGTGCTGGAAGTGACCGGCCCGGT CGTGGCGCGCAGCAGCGGCTTTCGCTTCACGCGGCCCGTGGCGGCCCTGGACGTCATTCCCCGGGCCGGCACGGTGATCG GCGACAACGACGGCGAGCCCGTCGCCACGCCCTACGACGATTGCGTGCTGGTGATGCCCTCCACGCGCCAGGCCCGCGCG GGCGTGACCGTCGTGCGCTTCGCGCGGCGGAGGCCGCTGTAG
Upstream 100 bases:
>100_bases GATCGGTCGTGGCTTCCCCGTCGGTCGATCCCGACGCATTCGTCGCGGCCGAAGTGGCCAAGTACCGCAAGATTGTCCAA TTCGCGAAGATCGAGGAATG
Downstream 100 bases:
>100_bases TCCCGCCGCCGTCCCTCAGTGGCCGGCCGTGCTGGAGAACAGGTTGATCACCAGCACGCCCGCCAGGATCAATCCCATGC CGGCCAGCGCGGGGCCGTCC
Product: hypothetical protein
Products: NA
Alternate protein names: Succinylglutamate Desuccinylase/Aspartoacylase Family; Aspartoacylase
Number of amino acids: Translated: 333; Mature: 333
Protein sequence:
>333_residues MQHATDTTAAPLRFDLPRPDLGAWRAGNTGTEGVWRFDSGRPGPDVLITALVHGNELCGAWALCDLLEAGIRPEAGRLTL AFCNLAAFDRFDPQDHDASRFVEEDMNRQWSDDRLDAADTRERRRAAALRPFVREAGWLLDLHSMHEPGAPLLLTGPHAR NQALARRMGAPEYVVADAGHQDGVRMRDYGRFGRPDADEAGPDGTRSLLVECGFHGDPASRAVARDQCVRFLETAGSLDA ATLARALPGWRQPDAPRQWVLEVTGPVVARSSGFRFTRPVAALDVIPRAGTVIGDNDGEPVATPYDDCVLVMPSTRQARA GVTVVRFARRRPL
Sequences:
>Translated_333_residues MQHATDTTAAPLRFDLPRPDLGAWRAGNTGTEGVWRFDSGRPGPDVLITALVHGNELCGAWALCDLLEAGIRPEAGRLTL AFCNLAAFDRFDPQDHDASRFVEEDMNRQWSDDRLDAADTRERRRAAALRPFVREAGWLLDLHSMHEPGAPLLLTGPHAR NQALARRMGAPEYVVADAGHQDGVRMRDYGRFGRPDADEAGPDGTRSLLVECGFHGDPASRAVARDQCVRFLETAGSLDA ATLARALPGWRQPDAPRQWVLEVTGPVVARSSGFRFTRPVAALDVIPRAGTVIGDNDGEPVATPYDDCVLVMPSTRQARA GVTVVRFARRRPL >Mature_333_residues MQHATDTTAAPLRFDLPRPDLGAWRAGNTGTEGVWRFDSGRPGPDVLITALVHGNELCGAWALCDLLEAGIRPEAGRLTL AFCNLAAFDRFDPQDHDASRFVEEDMNRQWSDDRLDAADTRERRRAAALRPFVREAGWLLDLHSMHEPGAPLLLTGPHAR NQALARRMGAPEYVVADAGHQDGVRMRDYGRFGRPDADEAGPDGTRSLLVECGFHGDPASRAVARDQCVRFLETAGSLDA ATLARALPGWRQPDAPRQWVLEVTGPVVARSSGFRFTRPVAALDVIPRAGTVIGDNDGEPVATPYDDCVLVMPSTRQARA GVTVVRFARRRPL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36413; Mature: 36413
Theoretical pI: Translated: 6.32; Mature: 6.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQHATDTTAAPLRFDLPRPDLGAWRAGNTGTEGVWRFDSGRPGPDVLITALVHGNELCGA CCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHEEEEECCCCHHHHH WALCDLLEAGIRPEAGRLTLAFCNLAAFDRFDPQDHDASRFVEEDMNRQWSDDRLDAADT HHHHHHHHHCCCCCCCCEEEEEECHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHH RERRRAAALRPFVREAGWLLDLHSMHEPGAPLLLTGPHARNQALARRMGAPEYVVADAGH HHHHHHHHHHHHHHHCCCEEEHHHCCCCCCCEEEECCCHHHHHHHHHCCCCCEEEECCCC QDGVRMRDYGRFGRPDADEAGPDGTRSLLVECGFHGDPASRAVARDQCVRFLETAGSLDA CCCCEEHHCCCCCCCCCCCCCCCCCHHHHEECCCCCCHHHHHHHHHHHHHHHHHCCCCHH ATLARALPGWRQPDAPRQWVLEVTGPVVARSSGFRFTRPVAALDVIPRAGTVIGDNDGEP HHHHHHCCCCCCCCCCHHEEEEECCCEEECCCCCEEECCHHHHHHCCCCCEEEECCCCCC VATPYDDCVLVMPSTRQARAGVTVVRFARRRPL CCCCCCCEEEEECCCCHHHCCHHHHHHHHHCCC >Mature Secondary Structure MQHATDTTAAPLRFDLPRPDLGAWRAGNTGTEGVWRFDSGRPGPDVLITALVHGNELCGA CCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHEEEEECCCCHHHHH WALCDLLEAGIRPEAGRLTLAFCNLAAFDRFDPQDHDASRFVEEDMNRQWSDDRLDAADT HHHHHHHHHCCCCCCCCEEEEEECHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHH RERRRAAALRPFVREAGWLLDLHSMHEPGAPLLLTGPHARNQALARRMGAPEYVVADAGH HHHHHHHHHHHHHHHCCCEEEHHHCCCCCCCEEEECCCHHHHHHHHHCCCCCEEEECCCC QDGVRMRDYGRFGRPDADEAGPDGTRSLLVECGFHGDPASRAVARDQCVRFLETAGSLDA CCCCEEHHCCCCCCCCCCCCCCCCCHHHHEECCCCCCHHHHHHHHHHHHHHHHHCCCCHH ATLARALPGWRQPDAPRQWVLEVTGPVVARSSGFRFTRPVAALDVIPRAGTVIGDNDGEP HHHHHHCCCCCCCCCCHHEEEEECCCEEECCCCCEEECCHHHHHHCCCCCEEEECCCCCC VATPYDDCVLVMPSTRQARAGVTVVRFARRRPL CCCCCCCEEEEECCCCHHHCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA