| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is yaeQ [H]
Identifier: 120613301
GI number: 120613301
Start: 5215568
End: 5216128
Strand: Direct
Name: yaeQ [H]
Synonym: Aave_4670
Alternate gene names: 120613301
Gene position: 5215568-5216128 (Clockwise)
Preceding gene: 120613300
Following gene: 120613304
Centisome position: 97.44
GC content: 68.98
Gene sequence:
>561_bases ATGGCCATCAAGTCCACCATCTTCAAGGCGCACCTCGCGATCGCCGACATCGACCACGGCTACTACGCCGACCACGCCCT GACCCTGGCGCGCCACCCCAGCGAGACCGACGAGCGCATGATGGTCCGGCTGGCGGCGCTGGCGCTCAACGCCTGGCAAC TGCAGGCCATGTGCCAGGGCGACGGCACGCTGGCCTTCGGCGCCGGCCTCTCGGACCCGGACGACCCGGACGTGTCCATC ACCGACTTCACGGGCCGCAAGCGCCTGTGGATCGAAGTCGGCCAGCCCGAGGACAAGCCGCTGGCCAAGGCCTCCTCCAA GGCCGACGCGGTACTGGTCTATTGCTTCCACCACGCGGCCGAGGTCTGGTGGAAGGGCATCGAAGGCAAGCTCACGCGCC AGGACAAGCTGCAGGTCTGGCGCCTGCCCACCGAGGCGTCGCAACAACTGGCGTCCCTGGCCGAGCGCAGCATGCAGCTG CAGGCCACGGTGCAGGAAGGCGGCCTCACGCTGAGCAGCGGCCTGGGCAGCGTGCACCTGGAGCCCATCCGCTGGAAGTG A
Upstream 100 bases:
>100_bases CCGGCCTGGAAATCCCCCAGGCCGACAAGGACCGCCTGCTGGCCATGACGCCGGGCAGCTACGTCGGCAAGGCCGCCGAG CTGGCGCGCCGGGTCTGACC
Downstream 100 bases:
>100_bases GCACGGGCTCCGCGTCCCCTCGTGGCCCCCGCGGCGTTCAGCCCCCCTCGGCCGCGGGCATGAACGCCCCGCAGTTCCAG CACTGCTCGAAACCGCCTTC
Product: YaeQ family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 186; Mature: 185
Protein sequence:
>186_residues MAIKSTIFKAHLAIADIDHGYYADHALTLARHPSETDERMMVRLAALALNAWQLQAMCQGDGTLAFGAGLSDPDDPDVSI TDFTGRKRLWIEVGQPEDKPLAKASSKADAVLVYCFHHAAEVWWKGIEGKLTRQDKLQVWRLPTEASQQLASLAERSMQL QATVQEGGLTLSSGLGSVHLEPIRWK
Sequences:
>Translated_186_residues MAIKSTIFKAHLAIADIDHGYYADHALTLARHPSETDERMMVRLAALALNAWQLQAMCQGDGTLAFGAGLSDPDDPDVSI TDFTGRKRLWIEVGQPEDKPLAKASSKADAVLVYCFHHAAEVWWKGIEGKLTRQDKLQVWRLPTEASQQLASLAERSMQL QATVQEGGLTLSSGLGSVHLEPIRWK >Mature_185_residues AIKSTIFKAHLAIADIDHGYYADHALTLARHPSETDERMMVRLAALALNAWQLQAMCQGDGTLAFGAGLSDPDDPDVSIT DFTGRKRLWIEVGQPEDKPLAKASSKADAVLVYCFHHAAEVWWKGIEGKLTRQDKLQVWRLPTEASQQLASLAERSMQLQ ATVQEGGLTLSSGLGSVHLEPIRWK
Specific function: Unknown
COG id: COG4681
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786388, Length=187, Percent_Identity=36.3636363636364, Blast_Score=124, Evalue=4e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009822 [H]
Pfam domain/function: PF07152 YaeQ [H]
EC number: NA
Molecular weight: Translated: 20505; Mature: 20373
Theoretical pI: Translated: 6.39; Mature: 6.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIKSTIFKAHLAIADIDHGYYADHALTLARHPSETDERMMVRLAALALNAWQLQAMCQG CCCHHHHHHHHEEEEECCCCEECCCEEEEECCCCCHHHHHHHHHHHHHHHHHHEEEEECC DGTLAFGAGLSDPDDPDVSITDFTGRKRLWIEVGQPEDKPLAKASSKADAVLVYCFHHAA CCEEEEECCCCCCCCCCEEEEECCCCEEEEEECCCCCCCCCHHCCCCCCEEEEHHHHHHH EVWWKGIEGKLTRQDKLQVWRLPTEASQQLASLAERSMQLQATVQEGGLTLSSGLGSVHL HHHHCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHEEEEHHHCCEEEECCCCCEEE EPIRWK CEECCC >Mature Secondary Structure AIKSTIFKAHLAIADIDHGYYADHALTLARHPSETDERMMVRLAALALNAWQLQAMCQG CCHHHHHHHHEEEEECCCCEECCCEEEEECCCCCHHHHHHHHHHHHHHHHHHEEEEECC DGTLAFGAGLSDPDDPDVSITDFTGRKRLWIEVGQPEDKPLAKASSKADAVLVYCFHHAA CCEEEEECCCCCCCCCCEEEEECCCCEEEEEECCCCCCCCCHHCCCCCCEEEEHHHHHHH EVWWKGIEGKLTRQDKLQVWRLPTEASQQLASLAERSMQLQATVQEGGLTLSSGLGSVHL HHHHCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHEEEEHHHCCEEEECCCCCEEE EPIRWK CEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11677608; 12644504 [H]