| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120613261
Identifier: 120613261
GI number: 120613261
Start: 5152368
End: 5153111
Strand: Direct
Name: 120613261
Synonym: Aave_4630
Alternate gene names: NA
Gene position: 5152368-5153111 (Clockwise)
Preceding gene: 120613260
Following gene: 120613266
Centisome position: 96.26
GC content: 75.54
Gene sequence:
>744_bases ATGCTGCGCGCCGCCGTCCTCGTTCTGCTGCTGGCCAATGCCGGCTATTACGCCTGGGCACAAGGCCTGCTGCGCGACTG GGGCATCGCGCCGGCCGAACAGTCCGAGCCCCAGCGCCTGGAGCAGCAGATCCATCCCGAGAACCTGCGCATCGGCCGGC CGGTGTCCGGAGATGCGGCATCGGCCCCCGCGTCCCCGCCACCCGCGGCGCCCTCCTCCGCAGCCACCCCGGCCAGCGAG GCATCCAATCCCGCCCCTGCCTCCGCGGGCCCGGCGCAGGCCGCGGCGGCCGACAGCACGGCCTGCCTGCAGGCCGGCCC GTTCGACGCGCGCCAGTCCGAGGCACTGCGCACGGCCGCCGCCGCCCTGCCCCCGAATAGCTGGAGCCTGGAGCCTGTGT CGGTCGCGAGCCGTTGGATGGTGTACATGGGGCGCTTCGCCGACGAAGACGCGCTGGAGAAGAAGCGCGCCGAACTGCGT GCGCGCAAGGTGGCCTACGACCGGCCGGGCCCTGCCCTGGAGCCGGGCCTGTCCCTGGGTCGCTTCTCGACCGAAGAAGC CGCCGAGCGGGCGCTGGCGGCGCTGGGCACGCAGGGCGTGCGCACGGCCCGGGTGGTGCAGGAGCGCTCGGACGCCACCG GCCATGTGCTGCGGCTGCCGGCGGCCACGCCCGCCCTGCGTGCCCAGGCCGAAACGCAGCTGCGCACGGCCCTCGCGGGC CGGCCGCTGCGCAACTGCGGCTAG
Upstream 100 bases:
>100_bases TGGTGCGCACGCCCCAGGGCCTGCAGGCCGTGACCAGCGCCGAGATCAGCGTGCGGCCGGCCGGGCAGGCGCTGCCGCGG AACTGAAGGAGCCTTCCACC
Downstream 100 bases:
>100_bases TCTGCGGCAGCCCGGCCCGGGGCTCGCGGGGCTTCCCATTGCGCGAGGCCTTCGGCCACCTGGTGGGCCAGTTCCCGTAC GCCGTCCGGCGACGTATCGT
Product: sporulation domain-containing protein
Products: NA
Alternate protein names: Sporulation Domain-Containing Protein; Sporulation Related Protein; Sporulation Domain Protein
Number of amino acids: Translated: 247; Mature: 247
Protein sequence:
>247_residues MLRAAVLVLLLANAGYYAWAQGLLRDWGIAPAEQSEPQRLEQQIHPENLRIGRPVSGDAASAPASPPPAAPSSAATPASE ASNPAPASAGPAQAAAADSTACLQAGPFDARQSEALRTAAAALPPNSWSLEPVSVASRWMVYMGRFADEDALEKKRAELR ARKVAYDRPGPALEPGLSLGRFSTEEAAERALAALGTQGVRTARVVQERSDATGHVLRLPAATPALRAQAETQLRTALAG RPLRNCG
Sequences:
>Translated_247_residues MLRAAVLVLLLANAGYYAWAQGLLRDWGIAPAEQSEPQRLEQQIHPENLRIGRPVSGDAASAPASPPPAAPSSAATPASE ASNPAPASAGPAQAAAADSTACLQAGPFDARQSEALRTAAAALPPNSWSLEPVSVASRWMVYMGRFADEDALEKKRAELR ARKVAYDRPGPALEPGLSLGRFSTEEAAERALAALGTQGVRTARVVQERSDATGHVLRLPAATPALRAQAETQLRTALAG RPLRNCG >Mature_247_residues MLRAAVLVLLLANAGYYAWAQGLLRDWGIAPAEQSEPQRLEQQIHPENLRIGRPVSGDAASAPASPPPAAPSSAATPASE ASNPAPASAGPAQAAAADSTACLQAGPFDARQSEALRTAAAALPPNSWSLEPVSVASRWMVYMGRFADEDALEKKRAELR ARKVAYDRPGPALEPGLSLGRFSTEEAAERALAALGTQGVRTARVVQERSDATGHVLRLPAATPALRAQAETQLRTALAG RPLRNCG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25809; Mature: 25809
Theoretical pI: Translated: 8.73; Mature: 8.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRAAVLVLLLANAGYYAWAQGLLRDWGIAPAEQSEPQRLEQQIHPENLRIGRPVSGDAA CHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCC SAPASPPPAAPSSAATPASEASNPAPASAGPAQAAAADSTACLQAGPFDARQSEALRTAA CCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCHHHHHCCCHHHHCCCCCCHHHHHHHHHHH AALPPNSWSLEPVSVASRWMVYMGRFADEDALEKKRAELRARKVAYDRPGPALEPGLSLG HHCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC RFSTEEAAERALAALGTQGVRTARVVQERSDATGHVLRLPAATPALRAQAETQLRTALAG CCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHHHC RPLRNCG CCHHCCC >Mature Secondary Structure MLRAAVLVLLLANAGYYAWAQGLLRDWGIAPAEQSEPQRLEQQIHPENLRIGRPVSGDAA CHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCC SAPASPPPAAPSSAATPASEASNPAPASAGPAQAAAADSTACLQAGPFDARQSEALRTAA CCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCHHHHHCCCHHHHCCCCCCHHHHHHHHHHH AALPPNSWSLEPVSVASRWMVYMGRFADEDALEKKRAELRARKVAYDRPGPALEPGLSLG HHCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC RFSTEEAAERALAALGTQGVRTARVVQERSDATGHVLRLPAATPALRAQAETQLRTALAG CCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHHHC RPLRNCG CCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA