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The map label for this gene is yvdE [H]

Identifier: 120613230

GI number: 120613230

Start: 5115452

End: 5116375

Strand: Direct

Name: yvdE [H]

Synonym: Aave_4597

Alternate gene names: 120613230

Gene position: 5115452-5116375 (Clockwise)

Preceding gene: 120613228

Following gene: 120613231

Centisome position: 95.57

GC content: 69.26

Gene sequence:

>924_bases
ATGCTTGATGTTCCCCCTTTCCGCGGGCCGCCACCCGCGCGGCGTGCCACGGCACTCCCGGCCGCCCAGCGGCTCAAGAT
CGGGCTGTCGGCCTGCTTCTCGCATGCCGACCCGGCCCGGTCGCTGTTCACCAACAAGACGCTGCAGTACGTCGAACAAT
CCATCGCGCACTGGATCATGTCGGCCGGCGCCATGGTCGTCATGGTGCCGTGCCCCACGGGCGAAACGGCCCGGGGCGAC
GTGACCCTGGCCCACTACGCCGAATGGCTGGACGGTGTCGTGATGCATGGCGGCGCCGATGTGTGGCCCGGCAGCTATGG
CGAGGTGCCGCTGAAGGATGCCTGGCTCGGCGATCGCATCCGCGACCTGTACGACCTGGCCGTGGTGGAAGCCTTCGAGC
AGGCGGGCAAGCCCATCTTCGGCGTGTGCCGGGGGCTGCAGCTCATCAACGTGGCCTTCGGCGGCACGCTCTACCAGGAC
ATCGAGACCCAGCACCCGGGTGCCCAGCAGCACCGCAACGCGGTCACCTACGACCAGCACTTCCACGAGGTGGAGATCGT
GCCAGGCACGCGGCTGTCGCAGCTGTATCCCCAGCAGCCGCGCATGGTGGTCAACAGCATCCACCACCAGGGCATCAAGA
ACCTGGCGCCCGGCTTCGAGATCGAGGCCTGGAGCCATCCCGACGGCGTGCCCGAGGCGATCCGCCGCAACGCCCACTCC
GGGCGCGGCTACATCGCCGCGACGCAGTGGCATCCGGAATTCTTCAAGCCGGGCGCCTCGCAGACCATGGACGACGCGCC
CATCCTGCATGACTTCCTGGCGGCCTGCATCCGTGCGAAATCGCGACCCGCGCCCGGGCACAGCCCCTTCCGGATCCGCG
ACCGCGCGGCCCGGCTGCTGCGCCAGGCCCTGCTTCGGCGCTAG

Upstream 100 bases:

>100_bases
TTCGCCGCCTGCGTGAACCGTGGGAACAGGGAGAGAGGCGCAGGCACGCGGGCGGCGGGTTCCTACAGCAGAGTCGCGCG
GGATGGGCTAAAAATTCCCC

Downstream 100 bases:

>100_bases
ATGTGATGTCTCAATAGGTTGTTCATCCAGGCCCGACCTGGGAAGCTGTGGTTACCAGGCCCCAGCAACTCAGGACAGGA
CACCGGATGAACAGTCATAA

Product: peptidase C26

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 307; Mature: 307

Protein sequence:

>307_residues
MLDVPPFRGPPPARRATALPAAQRLKIGLSACFSHADPARSLFTNKTLQYVEQSIAHWIMSAGAMVVMVPCPTGETARGD
VTLAHYAEWLDGVVMHGGADVWPGSYGEVPLKDAWLGDRIRDLYDLAVVEAFEQAGKPIFGVCRGLQLINVAFGGTLYQD
IETQHPGAQQHRNAVTYDQHFHEVEIVPGTRLSQLYPQQPRMVVNSIHHQGIKNLAPGFEIEAWSHPDGVPEAIRRNAHS
GRGYIAATQWHPEFFKPGASQTMDDAPILHDFLAACIRAKSRPAPGHSPFRIRDRAARLLRQALLRR

Sequences:

>Translated_307_residues
MLDVPPFRGPPPARRATALPAAQRLKIGLSACFSHADPARSLFTNKTLQYVEQSIAHWIMSAGAMVVMVPCPTGETARGD
VTLAHYAEWLDGVVMHGGADVWPGSYGEVPLKDAWLGDRIRDLYDLAVVEAFEQAGKPIFGVCRGLQLINVAFGGTLYQD
IETQHPGAQQHRNAVTYDQHFHEVEIVPGTRLSQLYPQQPRMVVNSIHHQGIKNLAPGFEIEAWSHPDGVPEAIRRNAHS
GRGYIAATQWHPEFFKPGASQTMDDAPILHDFLAACIRAKSRPAPGHSPFRIRDRAARLLRQALLRR
>Mature_307_residues
MLDVPPFRGPPPARRATALPAAQRLKIGLSACFSHADPARSLFTNKTLQYVEQSIAHWIMSAGAMVVMVPCPTGETARGD
VTLAHYAEWLDGVVMHGGADVWPGSYGEVPLKDAWLGDRIRDLYDLAVVEAFEQAGKPIFGVCRGLQLINVAFGGTLYQD
IETQHPGAQQHRNAVTYDQHFHEVEIVPGTRLSQLYPQQPRMVVNSIHHQGIKNLAPGFEIEAWSHPDGVPEAIRRNAHS
GRGYIAATQWHPEFFKPGASQTMDDAPILHDFLAACIRAKSRPAPGHSPFRIRDRAARLLRQALLRR

Specific function: Unknown

COG id: COG2071

COG function: function code R; Predicted glutamine amidotransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI87081871, Length=256, Percent_Identity=30.46875, Blast_Score=97, Evalue=1e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017926
- InterPro:   IPR011697 [H]

Pfam domain/function: PF07722 Peptidase_C26 [H]

EC number: NA

Molecular weight: Translated: 33962; Mature: 33962

Theoretical pI: Translated: 8.36; Mature: 8.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDVPPFRGPPPARRATALPAAQRLKIGLSACFSHADPARSLFTNKTLQYVEQSIAHWIM
CCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
SAGAMVVMVPCPTGETARGDVTLAHYAEWLDGVVMHGGADVWPGSYGEVPLKDAWLGDRI
HCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCHHHHHHHH
RDLYDLAVVEAFEQAGKPIFGVCRGLQLINVAFGGTLYQDIETQHPGAQQHRNAVTYDQH
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHCCCCCHHCC
FHEVEIVPGTRLSQLYPQQPRMVVNSIHHQGIKNLAPGFEIEAWSHPDGVPEAIRRNAHS
CCEEEECCCCHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCHHHHHHCCCC
GRGYIAATQWHPEFFKPGASQTMDDAPILHDFLAACIRAKSRPAPGHSPFRIRDRAARLL
CCCEEEEECCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
RQALLRR
HHHHHCC
>Mature Secondary Structure
MLDVPPFRGPPPARRATALPAAQRLKIGLSACFSHADPARSLFTNKTLQYVEQSIAHWIM
CCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
SAGAMVVMVPCPTGETARGDVTLAHYAEWLDGVVMHGGADVWPGSYGEVPLKDAWLGDRI
HCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCHHHHHHHH
RDLYDLAVVEAFEQAGKPIFGVCRGLQLINVAFGGTLYQDIETQHPGAQQHRNAVTYDQH
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHCCCCCHHCC
FHEVEIVPGTRLSQLYPQQPRMVVNSIHHQGIKNLAPGFEIEAWSHPDGVPEAIRRNAHS
CCEEEECCCCHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCHHHHHHCCCC
GRGYIAATQWHPEFFKPGASQTMDDAPILHDFLAACIRAKSRPAPGHSPFRIRDRAARLL
CCCEEEEECCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
RQALLRR
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11337471 [H]