Definition Acidovorax citrulli AAC00-1 chromosome, complete genome.
Accession NC_008752
Length 5,352,772

Click here to switch to the map view.

The map label for this gene is yeaZ [C]

Identifier: 120613202

GI number: 120613202

Start: 5086992

End: 5087774

Strand: Direct

Name: yeaZ [C]

Synonym: Aave_4569

Alternate gene names: 120613202

Gene position: 5086992-5087774 (Clockwise)

Preceding gene: 120613198

Following gene: 120613203

Centisome position: 95.03

GC content: 75.73

Gene sequence:

>783_bases
ATGCACCTGCTCGCCTTCGACACCAGCACCGACACCCTGTCCATCGCCGTCCAGCGGCCGGCGGCGGACGGCGGACCGGC
GTGCCTCTGGCAGCGCAGCGCCCCCGGCGGGGCCCATGCGTCGGCCGGACTGCTGCCGGCGATCCGGGAGCTGTTGTCGG
AGGCCGGGCTGTCGTTCGATACGCTGGACGCCATCGTTTTTGGCCGCGGGCCCGGTTCCTTCACCGGATTGCGCACGGCC
TGCGCCGTGGCCCAGGGCCTGGCATTCGGCGCCCGGGGCGGCGCGGGCGTGCCCGTGCTGCCGGTGGACACCCTGCTCGC
GGTCGCCGAGGAGGCCCGCGCCGCCCACGGCTGCACGCAGGTGGTGGCGGTGCTCGACGCGCGGATGGACGAGGTCTATG
CGGCACGCTATGCATGGCATGCCGAAGGAGGATGGCAGGCAGCGGACGGCGACACCTTCGGACTCTGCGCACCTGAAGCC
GTCCAGGTGCCGGAAGGCCATGCCGTGGCCGGCAATGCCCGCGCCGCCTACGGGGAGCGCCTCGCGCCCGGCGCACCCGC
CGCGGCGCACGTGGCCGCATTGCCCACGGCCGCGGCGCTGCTGCGCCTGGCGCCCGCGCTGCTGGCCGCCGGCCAGGCGG
TGCCGGCTGAGGGCGCGCTACCGCGCTACGTCCGCGACAAGGTGGCGCAGACCACGGCCGAGCGGGCTGCCGCCCGCGAG
GCGGCATCCATTGCCGGCAACCCATCCAGCGCCACGGGCGCTGGCGCGTCCCCGCAGCCATGA

Upstream 100 bases:

>100_bases
CCCTGACGCACCCCGCCCGGAGCGCAGCGCGGATAATCCCCCTCTTGCACGCCCCACCCGACCTGCACCGCGGCCGCGGG
TCCGCAGCCCCCATCCCACC

Downstream 100 bases:

>100_bases
GCGTCCATTTCCCCCATCCGGACGAAGTCCGCTTCGAGCCGCTCACGCCAGGACGCCTGGACGCATTGCTGGAGATCGAG
CGGCAGGCCTATTCGCATCC

Product: peptidase M22, glycoprotease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 260; Mature: 260

Protein sequence:

>260_residues
MHLLAFDTSTDTLSIAVQRPAADGGPACLWQRSAPGGAHASAGLLPAIRELLSEAGLSFDTLDAIVFGRGPGSFTGLRTA
CAVAQGLAFGARGGAGVPVLPVDTLLAVAEEARAAHGCTQVVAVLDARMDEVYAARYAWHAEGGWQAADGDTFGLCAPEA
VQVPEGHAVAGNARAAYGERLAPGAPAAAHVAALPTAAALLRLAPALLAAGQAVPAEGALPRYVRDKVAQTTAERAAARE
AASIAGNPSSATGAGASPQP

Sequences:

>Translated_260_residues
MHLLAFDTSTDTLSIAVQRPAADGGPACLWQRSAPGGAHASAGLLPAIRELLSEAGLSFDTLDAIVFGRGPGSFTGLRTA
CAVAQGLAFGARGGAGVPVLPVDTLLAVAEEARAAHGCTQVVAVLDARMDEVYAARYAWHAEGGWQAADGDTFGLCAPEA
VQVPEGHAVAGNARAAYGERLAPGAPAAAHVAALPTAAALLRLAPALLAAGQAVPAEGALPRYVRDKVAQTTAERAAARE
AASIAGNPSSATGAGASPQP
>Mature_260_residues
MHLLAFDTSTDTLSIAVQRPAADGGPACLWQRSAPGGAHASAGLLPAIRELLSEAGLSFDTLDAIVFGRGPGSFTGLRTA
CAVAQGLAFGARGGAGVPVLPVDTLLAVAEEARAAHGCTQVVAVLDARMDEVYAARYAWHAEGGWQAADGDTFGLCAPEA
VQVPEGHAVAGNARAAYGERLAPGAPAAAHVAALPTAAALLRLAPALLAAGQAVPAEGALPRYVRDKVAQTTAERAAARE
AASIAGNPSSATGAGASPQP

Specific function: Unknown

COG id: COG1214

COG function: function code O; Inactive homolog of metal-dependent proteases, putative molecular chaperone

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M22 family [H]

Homologues:

Organism=Escherichia coli, GI1788109, Length=235, Percent_Identity=32.7659574468085, Blast_Score=107, Evalue=1e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022496
- InterPro:   IPR000905 [H]

Pfam domain/function: PF00814 Peptidase_M22 [H]

EC number: NA

Molecular weight: Translated: 25866; Mature: 25866

Theoretical pI: Translated: 5.57; Mature: 5.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHLLAFDTSTDTLSIAVQRPAADGGPACLWQRSAPGGAHASAGLLPAIRELLSEAGLSFD
CEEEEEECCCCEEEEEEECCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCHH
TLDAIVFGRGPGSFTGLRTACAVAQGLAFGARGGAGVPVLPVDTLLAVAEEARAAHGCTQ
HHHEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
VVAVLDARMDEVYAARYAWHAEGGWQAADGDTFGLCAPEAVQVPEGHAVAGNARAAYGER
HHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCEECCCCCEECCCCHHHHCCC
LAPGAPAAAHVAALPTAAALLRLAPALLAAGQAVPAEGALPRYVRDKVAQTTAERAAARE
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
AASIAGNPSSATGAGASPQP
HHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MHLLAFDTSTDTLSIAVQRPAADGGPACLWQRSAPGGAHASAGLLPAIRELLSEAGLSFD
CEEEEEECCCCEEEEEEECCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCHH
TLDAIVFGRGPGSFTGLRTACAVAQGLAFGARGGAGVPVLPVDTLLAVAEEARAAHGCTQ
HHHEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
VVAVLDARMDEVYAARYAWHAEGGWQAADGDTFGLCAPEAVQVPEGHAVAGNARAAYGER
HHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCEECCCCCEECCCCHHHHCCC
LAPGAPAAAHVAALPTAAALLRLAPALLAAGQAVPAEGALPRYVRDKVAQTTAERAAARE
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
AASIAGNPSSATGAGASPQP
HHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]