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The map label for this gene is 120613151

Identifier: 120613151

GI number: 120613151

Start: 5017804

End: 5019405

Strand: Direct

Name: 120613151

Synonym: Aave_4518

Alternate gene names: NA

Gene position: 5017804-5019405 (Clockwise)

Preceding gene: 120613143

Following gene: 120613152

Centisome position: 93.74

GC content: 71.79

Gene sequence:

>1602_bases
ATGGAATCACCGGCGCCCGCCACGACGACAACCGCCCGGCCGGTGCGCGCCCTGGTGCTCGTGCTGGGCGACCAGCTCGA
TCCGGACGCAGCGGCCTTCGACGGCTTCGACCCGCGGCAGGACATGGCGTGGATGGCGGAAGTGGAAGAGGAATCCACGC
ACGTCTGGTCCTCCCGGCCGCGCATTGCCCTCTTTCTGGCGGCCATGCGGCATTTCGCGCAGGCGCTGCGGGCACTGGGC
CGCCCCCTGGACTACCGGCGCCTGGACGACGACCGCGAGCCCGCCTGCCGAACCCTGGCCGATGCGCTGCGCGCGGCGAT
CCGCACGCACCGGCCGCGGCGCCTCGTGATGACCGCGCCCGGGGACTGGCGCGTCTGGAAGGCGCTGTCCGCCGTCGCGG
CCGACGCCGGGCTGCCGCTGGAAACCCGGCCCGACCGCCACTTCTTCGCCACCGTGCGGGAATTCGCCGACTTCCGGCGC
CAGCTGGCCGGACGGCCGCTGCGCCTGGAAACCTTCTACCGCGCCATGCGCCGCCGCCACGGCATCCTGATGGACGGCCG
CCAGCCCGAAGGCGGCGCCTGGAACTACGACAAGGACAACCGGCGCCCCTTCGGTCCGCAGGGGCCGGGCATGGTGCCCG
GGCGCTGCCGCTTCGAGCCCGACGCCATCACCCGCGAGGTGCTGCAAATGGTCGCCCGGCGCTTCGGCGACCATCCGGGG
GCACTGGAGAGCTTCGCCTGGCCGGTCACCCGCGCCCAGGCCCTGCATGCGCTCGCAGACTTCGTGGACCACCGGCTGCC
GGCGTTCGGCCCCTTCCAGGACGCCATGTGGCCGGGCGAGCCCTGGCTCTACCACTCGCACCTTTCCGCGGCGCTCAACC
TGAAGCTGATCCATCCGCGCGAGGTGGTCGCGGCCACTGAGGCCGCCTACCGGAGCGGCCGTGTCCCGCTGGCCAGCGCC
GAGGGCTTCATCCGCCAGATCCTGGGCTGGCGCGAATACGTGCGCGGCATCTACTGGACCGAAATGCCGTCCTACCGGGA
CCGCAACGCGCTCGGTGCCGACGCACCCCTGCCCGCCTGGTACTGGACCGGCGACACCCCCTTCGCATGCCTGCGCCAGG
CCATCCGGCAAACGCTGGACCACGGCTACGCCCACCACATCCAGCGCCTCATGGTGACCGGCCTCTTCGCCCTGCTGCTG
GGCGTGCGGCCCCAGGCCGTGCACGCGTGGTACCTCGCCGTCTATGTCGATGCCGTCGAATGGGTGGAACTGCCCAACAC
CCTCGGCATGTCCCAGTACGCCGACGGCGGCCTGATGGCCAGCAAGCCCTACATCGCCACGGGCAAGTACATCCAGCGCA
TGGGCGGCCCCTGCGCCACCTGCCGCCACGACCCGGATGCCTTCCTGGGCGACACGGCCTGCCCCTTCACCACGCTCTAC
AGGGACTTCCTGCTCAGGCACCGGGAACTGCTGGCAGACGTGCCCCGCATGGCGGCACAGCTGGCGCGGCTGGAGACGAT
GCGGCCGCAGGAGCGTGAGGCGATACGCAGCAGGGCCGAGGAATTGCGGAGGGAACACGGCCGGGACGCCTGGCCGGATT
GA

Upstream 100 bases:

>100_bases
CTCAGCACAAGCGTGCACCCCGGAGCGTTGCGGTCATCTTAACCCGCCATCCAAACGCCCTGCTTCCGCTGCGGCTTCCG
GGCCGCCTATATTCCCGGGC

Downstream 100 bases:

>100_bases
AGCCGCGGGGACGCACACCTCGGACGATCACTCGGTCCCCAGCTCCGCGATGAAGCGTTCCTGCAGCCCCAGGCTCGTGC
GCCGTGGTCCGATGAATCGG

Product: deoxyribodipyrimidine photolyase-like protein

Products: NA

Alternate protein names: Deoxyribodipyrimidine Photolyase-Like Protein; Photolyase; Deoxyribodipyrimidine Photolyase Family Protein; Deoxyribodipyrimidine Photolyase; Photolyase Protein Family Protein; Deoxyribodipyrimidine Photolyase-Like Protein Protein; Photolyase Family Protein; Cryptochrome/Photolyase; DNA Photolyase; Bcct Transporter; Protein Related Deoxyribodipyrimidine Photolyase; Deoxyribodipyrimidine Photo-Lyase; Cryptochrome/Photolyase-Related; Photolyase Related Protein; BCCT Transporter; Alpha-Deoxyribodipyrimidine Photolyase-Related Protein; Deoxyribodipyrimidine Photolyase Related Protein; A Deoxyribodipyrimidine Photolyase-Like Protein; Deoxyribodipyrimidine Photolyase Homolog

Number of amino acids: Translated: 533; Mature: 533

Protein sequence:

>533_residues
MESPAPATTTTARPVRALVLVLGDQLDPDAAAFDGFDPRQDMAWMAEVEEESTHVWSSRPRIALFLAAMRHFAQALRALG
RPLDYRRLDDDREPACRTLADALRAAIRTHRPRRLVMTAPGDWRVWKALSAVAADAGLPLETRPDRHFFATVREFADFRR
QLAGRPLRLETFYRAMRRRHGILMDGRQPEGGAWNYDKDNRRPFGPQGPGMVPGRCRFEPDAITREVLQMVARRFGDHPG
ALESFAWPVTRAQALHALADFVDHRLPAFGPFQDAMWPGEPWLYHSHLSAALNLKLIHPREVVAATEAAYRSGRVPLASA
EGFIRQILGWREYVRGIYWTEMPSYRDRNALGADAPLPAWYWTGDTPFACLRQAIRQTLDHGYAHHIQRLMVTGLFALLL
GVRPQAVHAWYLAVYVDAVEWVELPNTLGMSQYADGGLMASKPYIATGKYIQRMGGPCATCRHDPDAFLGDTACPFTTLY
RDFLLRHRELLADVPRMAAQLARLETMRPQEREAIRSRAEELRREHGRDAWPD

Sequences:

>Translated_533_residues
MESPAPATTTTARPVRALVLVLGDQLDPDAAAFDGFDPRQDMAWMAEVEEESTHVWSSRPRIALFLAAMRHFAQALRALG
RPLDYRRLDDDREPACRTLADALRAAIRTHRPRRLVMTAPGDWRVWKALSAVAADAGLPLETRPDRHFFATVREFADFRR
QLAGRPLRLETFYRAMRRRHGILMDGRQPEGGAWNYDKDNRRPFGPQGPGMVPGRCRFEPDAITREVLQMVARRFGDHPG
ALESFAWPVTRAQALHALADFVDHRLPAFGPFQDAMWPGEPWLYHSHLSAALNLKLIHPREVVAATEAAYRSGRVPLASA
EGFIRQILGWREYVRGIYWTEMPSYRDRNALGADAPLPAWYWTGDTPFACLRQAIRQTLDHGYAHHIQRLMVTGLFALLL
GVRPQAVHAWYLAVYVDAVEWVELPNTLGMSQYADGGLMASKPYIATGKYIQRMGGPCATCRHDPDAFLGDTACPFTTLY
RDFLLRHRELLADVPRMAAQLARLETMRPQEREAIRSRAEELRREHGRDAWPD
>Mature_533_residues
MESPAPATTTTARPVRALVLVLGDQLDPDAAAFDGFDPRQDMAWMAEVEEESTHVWSSRPRIALFLAAMRHFAQALRALG
RPLDYRRLDDDREPACRTLADALRAAIRTHRPRRLVMTAPGDWRVWKALSAVAADAGLPLETRPDRHFFATVREFADFRR
QLAGRPLRLETFYRAMRRRHGILMDGRQPEGGAWNYDKDNRRPFGPQGPGMVPGRCRFEPDAITREVLQMVARRFGDHPG
ALESFAWPVTRAQALHALADFVDHRLPAFGPFQDAMWPGEPWLYHSHLSAALNLKLIHPREVVAATEAAYRSGRVPLASA
EGFIRQILGWREYVRGIYWTEMPSYRDRNALGADAPLPAWYWTGDTPFACLRQAIRQTLDHGYAHHIQRLMVTGLFALLL
GVRPQAVHAWYLAVYVDAVEWVELPNTLGMSQYADGGLMASKPYIATGKYIQRMGGPCATCRHDPDAFLGDTACPFTTLY
RDFLLRHRELLADVPRMAAQLARLETMRPQEREAIRSRAEELRREHGRDAWPD

Specific function: Unknown

COG id: COG3046

COG function: function code R; Uncharacterized protein related to deoxyribodipyrimidine photolyase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60555; Mature: 60555

Theoretical pI: Translated: 8.91; Mature: 8.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESPAPATTTTARPVRALVLVLGDQLDPDAAAFDGFDPRQDMAWMAEVEEESTHVWSSRP
CCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCC
RIALFLAAMRHFAQALRALGRPLDYRRLDDDREPACRTLADALRAAIRTHRPRRLVMTAP
HHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECC
GDWRVWKALSAVAADAGLPLETRPDRHFFATVREFADFRRQLAGRPLRLETFYRAMRRRH
CCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHC
GILMDGRQPEGGAWNYDKDNRRPFGPQGPGMVPGRCRFEPDAITREVLQMVARRFGDHPG
CCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC
ALESFAWPVTRAQALHALADFVDHRLPAFGPFQDAMWPGEPWLYHSHLSAALNLKLIHPR
CHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCEEHHHHHHHHEEEEECHH
EVVAATEAAYRSGRVPLASAEGFIRQILGWREYVRGIYWTEMPSYRDRNALGADAPLPAW
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCE
YWTGDTPFACLRQAIRQTLDHGYAHHIQRLMVTGLFALLLGVRPQAVHAWYLAVYVDAVE
EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
WVELPNTLGMSQYADGGLMASKPYIATGKYIQRMGGPCATCRHDPDAFLGDTACPFTTLY
HHHCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHCCCCCCHHHHHH
RDFLLRHRELLADVPRMAAQLARLETMRPQEREAIRSRAEELRREHGRDAWPD
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MESPAPATTTTARPVRALVLVLGDQLDPDAAAFDGFDPRQDMAWMAEVEEESTHVWSSRP
CCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCC
RIALFLAAMRHFAQALRALGRPLDYRRLDDDREPACRTLADALRAAIRTHRPRRLVMTAP
HHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECC
GDWRVWKALSAVAADAGLPLETRPDRHFFATVREFADFRRQLAGRPLRLETFYRAMRRRH
CCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHC
GILMDGRQPEGGAWNYDKDNRRPFGPQGPGMVPGRCRFEPDAITREVLQMVARRFGDHPG
CCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC
ALESFAWPVTRAQALHALADFVDHRLPAFGPFQDAMWPGEPWLYHSHLSAALNLKLIHPR
CHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCEEHHHHHHHHEEEEECHH
EVVAATEAAYRSGRVPLASAEGFIRQILGWREYVRGIYWTEMPSYRDRNALGADAPLPAW
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCE
YWTGDTPFACLRQAIRQTLDHGYAHHIQRLMVTGLFALLLGVRPQAVHAWYLAVYVDAVE
EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
WVELPNTLGMSQYADGGLMASKPYIATGKYIQRMGGPCATCRHDPDAFLGDTACPFTTLY
HHHCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHCCCCCCHHHHHH
RDFLLRHRELLADVPRMAAQLARLETMRPQEREAIRSRAEELRREHGRDAWPD
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA