| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is tauC [C]
Identifier: 120613147
GI number: 120613147
Start: 5013389
End: 5014180
Strand: Reverse
Name: tauC [C]
Synonym: Aave_4514
Alternate gene names: 120613147
Gene position: 5014180-5013389 (Counterclockwise)
Preceding gene: 120613148
Following gene: 120613146
Centisome position: 93.67
GC content: 71.09
Gene sequence:
>792_bases ATGAGTGCATCCCGCGAGCAGGGCGCCCCTTCGACTGCCTGGCCGTACCGCGCCCTGGGCACCGCGCTGCTGCTGGCGCT GCTGGGCGCGTGGGAATGGGTGGCCCGGCATTCGGGGCTCTCGGCGCTGGTGCTGCCCGCGCCCTCGGCCATCGCGGCAT CGCTCTGGCAGGGGCTGTGCACGGGCTATTTCGTGCCCCATGTGCGCGCCACGCTGGCGGCGCTGCTGCTGGGGCTGGCG GGCGGGGGGCTGGCGGGTCTGGCGATCGGCATCGCGCTGGCCGAATCGCCGCTGCTGGAGCGCGTGCTGCGGCCCTACGT GGTGGTCAGCCAGGTGGTGCCCAAGCTGGCGCTGGCGCCGTTGTTCGTGCTGTGGTTCGGCTTCGGCATTCCATCCACCG CGCTCATCACCGGTCTGATCTGTTTCTTCCCATTGATGGAAAACACCTTCACCGGGCTGCGGCAGGCCGATGCGCAGCGC CTGCAGCTCTTTCGCATGCTGGGCGCCACGCGCTGGCAGACGCTGCTGCGCCTGAAATTGCCGCTGGCGCTGCCGGCCAT CCTGGCGGGCCTGCGCATGGCCGTGGTGCTGGCGCTGGTGGGGGCGGTGGTGGGCGAGTTCATCGGCGCCAGCCGGGGCC TGGGCGCGGTGGTGATCGCCGCGCAGGGGATGATGGACACGTCCCTGATGTTCGCGGCGCTGGTGCTCATCGCGGCCATC GGGCTGCTGCTCTACCAGGCCACGCTGTGGCTGGAGCGCTGGCTGCTGCGGCCCTATGCCGATCGTTCCTGA
Upstream 100 bases:
>100_bases GCATCGACCTGCCCGCGCCGCGCACCCAGGCCATGCGGCACGACGCGCCCTTCAACCGCCTGTGCGCGCGCGTGCGCGCC GGCCTGGACGGGGTGGGCGC
Downstream 100 bases:
>100_bases ACGTGCTTTTCCCATCCTCTTTTTCGACGACATGCAACGACCTGAATTCCTCTCGCGCCGCACGCTGCTGGCGGCTTCCG CCGGGCTGGCGGCCACGCGC
Product: binding-protein-dependent transport systems inner membrane component
Products: taurine [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 263; Mature: 262
Protein sequence:
>263_residues MSASREQGAPSTAWPYRALGTALLLALLGAWEWVARHSGLSALVLPAPSAIAASLWQGLCTGYFVPHVRATLAALLLGLA GGGLAGLAIGIALAESPLLERVLRPYVVVSQVVPKLALAPLFVLWFGFGIPSTALITGLICFFPLMENTFTGLRQADAQR LQLFRMLGATRWQTLLRLKLPLALPAILAGLRMAVVLALVGAVVGEFIGASRGLGAVVIAAQGMMDTSLMFAALVLIAAI GLLLYQATLWLERWLLRPYADRS
Sequences:
>Translated_263_residues MSASREQGAPSTAWPYRALGTALLLALLGAWEWVARHSGLSALVLPAPSAIAASLWQGLCTGYFVPHVRATLAALLLGLA GGGLAGLAIGIALAESPLLERVLRPYVVVSQVVPKLALAPLFVLWFGFGIPSTALITGLICFFPLMENTFTGLRQADAQR LQLFRMLGATRWQTLLRLKLPLALPAILAGLRMAVVLALVGAVVGEFIGASRGLGAVVIAAQGMMDTSLMFAALVLIAAI GLLLYQATLWLERWLLRPYADRS >Mature_262_residues SASREQGAPSTAWPYRALGTALLLALLGAWEWVARHSGLSALVLPAPSAIAASLWQGLCTGYFVPHVRATLAALLLGLAG GGLAGLAIGIALAESPLLERVLRPYVVVSQVVPKLALAPLFVLWFGFGIPSTALITGLICFFPLMENTFTGLRQADAQRL QLFRMLGATRWQTLLRLKLPLALPAILAGLRMAVVLALVGAVVGEFIGASRGLGAVVIAAQGMMDTSLMFAALVLIAAIG LLLYQATLWLERWLLRPYADRS
Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0600
COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786564, Length=226, Percent_Identity=33.6283185840708, Blast_Score=98, Evalue=7e-22, Organism=Escherichia coli, GI87081802, Length=249, Percent_Identity=29.3172690763052, Blast_Score=91, Evalue=1e-19, Organism=Escherichia coli, GI1789033, Length=163, Percent_Identity=31.9018404907975, Blast_Score=73, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 27893; Mature: 27762
Theoretical pI: Translated: 10.67; Mature: 10.67
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSASREQGAPSTAWPYRALGTALLLALLGAWEWVARHSGLSALVLPAPSAIAASLWQGLC CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHH TGYFVPHVRATLAALLLGLAGGGLAGLAIGIALAESPLLERVLRPYVVVSQVVPKLALAP HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH LFVLWFGFGIPSTALITGLICFFPLMENTFTGLRQADAQRLQLFRMLGATRWQTLLRLKL HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PLALPAILAGLRMAVVLALVGAVVGEFIGASRGLGAVVIAAQGMMDTSLMFAALVLIAAI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHH GLLLYQATLWLERWLLRPYADRS HHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SASREQGAPSTAWPYRALGTALLLALLGAWEWVARHSGLSALVLPAPSAIAASLWQGLC CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHH TGYFVPHVRATLAALLLGLAGGGLAGLAIGIALAESPLLERVLRPYVVVSQVVPKLALAP HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH LFVLWFGFGIPSTALITGLICFFPLMENTFTGLRQADAQRLQLFRMLGATRWQTLLRLKL HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PLALPAILAGLRMAVVLALVGAVVGEFIGASRGLGAVVIAAQGMMDTSLMFAALVLIAAI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHH GLLLYQATLWLERWLLRPYADRS HHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: taurine [Periplasm]; ATP; H2O [C]
Specific reaction: taurine [Periplasm] + ATP + H2O = taurine [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]