Definition Acidovorax citrulli AAC00-1 chromosome, complete genome.
Accession NC_008752
Length 5,352,772

Click here to switch to the map view.

The map label for this gene is 120613142

Identifier: 120613142

GI number: 120613142

Start: 5008907

End: 5009851

Strand: Reverse

Name: 120613142

Synonym: Aave_4509

Alternate gene names: NA

Gene position: 5009851-5008907 (Counterclockwise)

Preceding gene: 120613144

Following gene: 120613141

Centisome position: 93.59

GC content: 74.07

Gene sequence:

>945_bases
ATGAGCAGCAACGACAGCAATTCCGCCGGCAGCGATACATCCCCCTTCGGTTTCGGCCGTTTCGTGCCGGGCTTCGATTT
CCTGCAGAACCTCGCCAAGGGCGCGGCGGCGGGCATGCCGCAGATGCCGCCGCTTTCGGGCTGGGTGGCGCCCACGATCA
GCGTGGAAGAGCTGGAAAAGCGCATCAGCGAACTGAAGGCGGTGCAGTTCTGGCTGGACCAGAATTCCCGCGCGCTCACG
GCGACCGTGCAGGCGCTGGAAGTGCAGAAGATGACGCTGTCCACGCTGCAGGGCATGAACGTGGCGATGGGCGACATCGC
GAAGGCTTTCACGCCGCAGGCGGCGCCCCCCGCGTCCGGGCCGGCGGCGCCGCGTCCCGATCCTTTCGCGCGGCCGCCGC
GCCCCGGGCCTGCAGCGCCGGCACCTGCTCCGGAGCCGGCCGCGCAGGCGCCGGCGGCAGCGGGCCGCGACGCCACCGGC
GACGCCGGCACCGAGCCGCCCCTCGCCGCGCCGGGCGTGGTGGACCCGATGCAATGGTGGTCCGCGCTCACGGGCCAGTT
CCAGCAGATCGCCGCCAATGCGATGAGCGACGTCTCGAAGCTGCCTTCGATGGACGCCACGCGCGGCATGGCGGCGGAGG
CGCTCAAGACGGCCACCGACATGGCGACGCAGTTCGCCGCGCAGGGCATGCAAGGTATGCAGGACATGCAGGACGCCGCG
CGCCAGGCCACGGAGGCCGGCACCGGGGGGGCGCGCGCCACGGACGGCGGCGGGGCGGCGCGCGGAGCGAAGCGCCCGCC
TTCCGCGGCGGCCCCTGCGCCGCGCGCCACAGCCGCCAAAGCACCTTCCGCGAAGGCCTCTTCCGCGAAGGCCCCGGCAG
GGGCGCCGCCCGGGGGCGCACGCCGCGCCGCCAGCCCCAAGCCCGGGCCGAAGGGCCGTTCCTGA

Upstream 100 bases:

>100_bases
CGTTGGTGGAGTCGCGCAATCGCGTTAAGCTGCCACCCACGGGGCCGGTGCCCCGGCGCAACGCAGCGGTATGTTCCGCC
CCACGCAAGGAGCCCAGGCC

Downstream 100 bases:

>100_bases
CGGGCGCAGTCTCGCCTGTGATCGCGGTCCACCGATTTTTTCGACCATGAAACTCTTTCCCAACGGCCATGCCACCCACC
CGCAATGGCGCATGGCCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 314; Mature: 313

Protein sequence:

>314_residues
MSSNDSNSAGSDTSPFGFGRFVPGFDFLQNLAKGAAAGMPQMPPLSGWVAPTISVEELEKRISELKAVQFWLDQNSRALT
ATVQALEVQKMTLSTLQGMNVAMGDIAKAFTPQAAPPASGPAAPRPDPFARPPRPGPAAPAPAPEPAAQAPAAAGRDATG
DAGTEPPLAAPGVVDPMQWWSALTGQFQQIAANAMSDVSKLPSMDATRGMAAEALKTATDMATQFAAQGMQGMQDMQDAA
RQATEAGTGGARATDGGGAARGAKRPPSAAAPAPRATAAKAPSAKASSAKAPAGAPPGGARRAASPKPGPKGRS

Sequences:

>Translated_314_residues
MSSNDSNSAGSDTSPFGFGRFVPGFDFLQNLAKGAAAGMPQMPPLSGWVAPTISVEELEKRISELKAVQFWLDQNSRALT
ATVQALEVQKMTLSTLQGMNVAMGDIAKAFTPQAAPPASGPAAPRPDPFARPPRPGPAAPAPAPEPAAQAPAAAGRDATG
DAGTEPPLAAPGVVDPMQWWSALTGQFQQIAANAMSDVSKLPSMDATRGMAAEALKTATDMATQFAAQGMQGMQDMQDAA
RQATEAGTGGARATDGGGAARGAKRPPSAAAPAPRATAAKAPSAKASSAKAPAGAPPGGARRAASPKPGPKGRS
>Mature_313_residues
SSNDSNSAGSDTSPFGFGRFVPGFDFLQNLAKGAAAGMPQMPPLSGWVAPTISVEELEKRISELKAVQFWLDQNSRALTA
TVQALEVQKMTLSTLQGMNVAMGDIAKAFTPQAAPPASGPAAPRPDPFARPPRPGPAAPAPAPEPAAQAPAAAGRDATGD
AGTEPPLAAPGVVDPMQWWSALTGQFQQIAANAMSDVSKLPSMDATRGMAAEALKTATDMATQFAAQGMQGMQDMQDAAR
QATEAGTGGARATDGGGAARGAKRPPSAAAPAPRATAAKAPSAKASSAKAPAGAPPGGARRAASPKPGPKGRS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31514; Mature: 31382

Theoretical pI: Translated: 10.43; Mature: 10.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSNDSNSAGSDTSPFGFGRFVPGFDFLQNLAKGAAAGMPQMPPLSGWVAPTISVEELEK
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHH
RISELKAVQFWLDQNSRALTATVQALEVQKMTLSTLQGMNVAMGDIAKAFTPQAAPPASG
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCC
PAAPRPDPFARPPRPGPAAPAPAPEPAAQAPAAAGRDATGDAGTEPPLAAPGVVDPMQWW
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
SALTGQFQQIAANAMSDVSKLPSMDATRGMAAEALKTATDMATQFAAQGMQGMQDMQDAA
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RQATEAGTGGARATDGGGAARGAKRPPSAAAPAPRATAAKAPSAKASSAKAPAGAPPGGA
HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCC
RRAASPKPGPKGRS
CCCCCCCCCCCCCC
>Mature Secondary Structure 
SSNDSNSAGSDTSPFGFGRFVPGFDFLQNLAKGAAAGMPQMPPLSGWVAPTISVEELEK
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHH
RISELKAVQFWLDQNSRALTATVQALEVQKMTLSTLQGMNVAMGDIAKAFTPQAAPPASG
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCC
PAAPRPDPFARPPRPGPAAPAPAPEPAAQAPAAAGRDATGDAGTEPPLAAPGVVDPMQWW
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
SALTGQFQQIAANAMSDVSKLPSMDATRGMAAEALKTATDMATQFAAQGMQGMQDMQDAA
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RQATEAGTGGARATDGGGAARGAKRPPSAAAPAPRATAAKAPSAKASSAKAPAGAPPGGA
HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCC
RRAASPKPGPKGRS
CCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA