| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120613131
Identifier: 120613131
GI number: 120613131
Start: 4997277
End: 4998161
Strand: Reverse
Name: 120613131
Synonym: Aave_4498
Alternate gene names: NA
Gene position: 4998161-4997277 (Counterclockwise)
Preceding gene: 120613133
Following gene: 120613130
Centisome position: 93.38
GC content: 77.06
Gene sequence:
>885_bases ATGCACCCTCCCGCATCCTCTTCCCGCACCGCGTCCCTGCCGCTATCCCGCCGCGAAGGCGTGCTCTGCGCCGCCCTGCT GGCCGGCGTGGCGCTGGCCCTGGCGGGCCCTGTCGTTCCGCCCGGGCCGCAGGCGCATGCCTATGCCGACCAGCGCACGC TCTGGGGCCTGCCGCATGCGATGGACGTGCTCACCAACCTGCCGTTCGCGCTGATGGGAGTTTTCGGGCTGGCGCGGCTG GCGGCCCGGGTGCGCGAAGGGGCGCTGCGGGTGGCCGGCGCCGCGGCGGCGGGCCTGTTCTTCGCGGGGCTGCTGCTGAC CGCCGGAGGCTCGGCGCTCTACCACTGGCAGCCCCACGGCATCACGCTGCTGGCGGACCGCGCCGGCATGCTCGTGGCGT TCGCCGGCATGCTGGCGCTCGCGGTGGACGAGCGCATCGGCGCGCGGGCCGCCGCCCTCGTGTGCGCCACGGTGCTGGCC GGCGGCGCGGCCGCGCTGCGCACCTGGGGCATCACCGGCGACCTCTGGCCCTGGGCGGTGCTGCAGGGCGGCGGCATGCT GCTCCTGCTGGCCTTGGCGGCCGACGCATGGCGGTGCCGGCGGGCCGGGCGCGCGCCGCTGCCGGGGCGGCTGGGCGTCT CCCTGGCCGCGGTGATCGGCTGGTACGGCCTGGCGAAACTGCTGGAGGCCGGCGATGCGGCGGTGTTCGCCGCCACGGGG CACCTGGTGTCCGGCCACAGCCTCAAGCACCTGGCCGCGGCGATGGCGGCCTGGCCGCTGCTGGCGGCGCTGGCGCCGGG CCGGTATTTCGCGCGCTGCGAGCGCGGCACGCCCTGGCGCGGCCGCCGCGAAGGCACAATGCCCGCCGGCGCGAAGTCGA AATGA
Upstream 100 bases:
>100_bases GATACTGCGGGTGGCCGGCGGCAGTTCTGGTGGCACTGGGCGATGCTGAAGGCCGGGCGCGGCGCGAGACTGACCGGCAC ATCCACTGCACGCACCTGCC
Downstream 100 bases:
>100_bases CGCGATTTCCACACACTCCCCAGGAGCACGGCATGAGCCAGGAACAGACCCGCATGGCGGCGACGGAGGCCGCCCTCCCT TCGGGCGGCGGGCACGAGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 294; Mature: 294
Protein sequence:
>294_residues MHPPASSSRTASLPLSRREGVLCAALLAGVALALAGPVVPPGPQAHAYADQRTLWGLPHAMDVLTNLPFALMGVFGLARL AARVREGALRVAGAAAAGLFFAGLLLTAGGSALYHWQPHGITLLADRAGMLVAFAGMLALAVDERIGARAAALVCATVLA GGAAALRTWGITGDLWPWAVLQGGGMLLLLALAADAWRCRRAGRAPLPGRLGVSLAAVIGWYGLAKLLEAGDAAVFAATG HLVSGHSLKHLAAAMAAWPLLAALAPGRYFARCERGTPWRGRREGTMPAGAKSK
Sequences:
>Translated_294_residues MHPPASSSRTASLPLSRREGVLCAALLAGVALALAGPVVPPGPQAHAYADQRTLWGLPHAMDVLTNLPFALMGVFGLARL AARVREGALRVAGAAAAGLFFAGLLLTAGGSALYHWQPHGITLLADRAGMLVAFAGMLALAVDERIGARAAALVCATVLA GGAAALRTWGITGDLWPWAVLQGGGMLLLLALAADAWRCRRAGRAPLPGRLGVSLAAVIGWYGLAKLLEAGDAAVFAATG HLVSGHSLKHLAAAMAAWPLLAALAPGRYFARCERGTPWRGRREGTMPAGAKSK >Mature_294_residues MHPPASSSRTASLPLSRREGVLCAALLAGVALALAGPVVPPGPQAHAYADQRTLWGLPHAMDVLTNLPFALMGVFGLARL AARVREGALRVAGAAAAGLFFAGLLLTAGGSALYHWQPHGITLLADRAGMLVAFAGMLALAVDERIGARAAALVCATVLA GGAAALRTWGITGDLWPWAVLQGGGMLLLLALAADAWRCRRAGRAPLPGRLGVSLAAVIGWYGLAKLLEAGDAAVFAATG HLVSGHSLKHLAAAMAAWPLLAALAPGRYFARCERGTPWRGRREGTMPAGAKSK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30141; Mature: 30141
Theoretical pI: Translated: 11.45; Mature: 11.45
Prosite motif: PS00133 CARBOXYPEPT_ZN_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHPPASSSRTASLPLSRREGVLCAALLAGVALALAGPVVPPGPQAHAYADQRTLWGLPHA CCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCHHH MDVLTNLPFALMGVFGLARLAARVREGALRVAGAAAAGLFFAGLLLTAGGSALYHWQPHG HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCC ITLLADRAGMLVAFAGMLALAVDERIGARAAALVCATVLAGGAAALRTWGITGDLWPWAV EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCHHHH LQGGGMLLLLALAADAWRCRRAGRAPLPGRLGVSLAAVIGWYGLAKLLEAGDAAVFAATG HCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECC HLVSGHSLKHLAAAMAAWPLLAALAPGRYFARCERGTPWRGRREGTMPAGAKSK CEECCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MHPPASSSRTASLPLSRREGVLCAALLAGVALALAGPVVPPGPQAHAYADQRTLWGLPHA CCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCHHH MDVLTNLPFALMGVFGLARLAARVREGALRVAGAAAAGLFFAGLLLTAGGSALYHWQPHG HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCC ITLLADRAGMLVAFAGMLALAVDERIGARAAALVCATVLAGGAAALRTWGITGDLWPWAV EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCHHHH LQGGGMLLLLALAADAWRCRRAGRAPLPGRLGVSLAAVIGWYGLAKLLEAGDAAVFAATG HCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECC HLVSGHSLKHLAAAMAAWPLLAALAPGRYFARCERGTPWRGRREGTMPAGAKSK CEECCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA