| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
Click here to switch to the map view.
The map label for this gene is 120613120
Identifier: 120613120
GI number: 120613120
Start: 4984736
End: 4985866
Strand: Reverse
Name: 120613120
Synonym: Aave_4487
Alternate gene names: NA
Gene position: 4985866-4984736 (Counterclockwise)
Preceding gene: 120613121
Following gene: 120613119
Centisome position: 93.15
GC content: 70.2
Gene sequence:
>1131_bases ATGGATCAACACAAGGAGTCCGACATGGGTAAATCCCTGCGCCTGTCCGAAAAGTGGTTCCGCCGCGGCCTGTGGCTGGT GTCGCTGGTGTTCGCCAGCTTCCTCATCGGGCTGGGCGGCACGCTGGTGGGCGACCTGCCGCGCGTGGAAGCGCCGCTGC AGCTCGATGATTTCCTGGACCGGCCCGCCGCGGAGGCGCTGCGCAACGAGGTGCGCGCGTCCGACGGGGCCGAGCGGCAG GCACGGGCCGCGCTGGAGCAGGCCCAGCTGCAGCGCAGCAAGGCGCGCAGCGAGAGCCAGGCGGCGCACGAGAGCTTCAA CAACTGGATCGCCACGCGCAGCGCCACGCAGCAGTCTGAGCACAACCCCGAGGTGGTGGCGCGCACGCAGGCGCTGGATG CCTTGAAGGTCCGCGAGCAGCAGACGCAGCGGGCGGTGGAGGCCCAGCAGCAGGCCGCGCTCGATGCACGCCAGGCCGCG GCGGCTGCGCGCCAGCGCCTGGAACAGATGGAGGCGGCCGGCTATGAGCAGATGCGTGTGGCCCATCGCAAGGTGGAGCT GCGGGTGTTCCTCTACCGGCTCGCGCTCACGCTGCCGCTGCTGCTGGTCGCGGGCTGGCTGTTCGCGAAGAAGCGGCAGA GCACGTGGTGGCCGTTCGTCTGGGGCTTCATCTTTTTCGCGCTGTTCGCGTTCTTCGTCGAACTCGTGCCCTACCTGCCC AGCTACGGCGGCTACGTCCGCTATGCCGTGGGCATCGTGGTGACCGTGCTGGTGGGGCGCTACGCCATCCTGGCGCTGAA CCGCTACCTCGAGCGCCAGCGGCAGGCGGAGGCGCTGCCCGACGCGCAACGGCGCGAGGAACTGAGCTACGACGTCGCCC TGACGCGCCTGGCCAAGGGCGTGTGCCCCGGCTGCGAGCGCCCGGTCGATCTGAAGAACGAATCCATCGATTTCTGTCCG CATTGCGGCATCGGCCTGTTCGACCGCTGTGGCCACTGCCGCACCCGCAAGAGTGCCTTCGCGCGGTTCTGCCACGCGTG CGGAACACCGGCAGGCAAGGCGCCGCCGGCGGGGCCGTTGCCGGAACGGGGCGCGGCACCCACGCAGGGGCAGGTCTCCG GCCCGGCATAG
Upstream 100 bases:
>100_bases GCTGGCCTGGATGCCCCGCGCCGGGCTGGGATCGGAGGTGTCCACGCTCTCGCTGGACCGCTCTCCCTGAGCACCGCATG ATCGGTGCCTGCTCGAAAGA
Downstream 100 bases:
>100_bases CCGCGGGGGGCCGAGCAGGGTCCGACAGGCAGGCAGAACCTTTTCCTACGGGCTCGACGGGCGCGGGTTTTCCACACTGG GAGGCCGTTTACGACCTCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 376; Mature: 376
Protein sequence:
>376_residues MDQHKESDMGKSLRLSEKWFRRGLWLVSLVFASFLIGLGGTLVGDLPRVEAPLQLDDFLDRPAAEALRNEVRASDGAERQ ARAALEQAQLQRSKARSESQAAHESFNNWIATRSATQQSEHNPEVVARTQALDALKVREQQTQRAVEAQQQAALDARQAA AAARQRLEQMEAAGYEQMRVAHRKVELRVFLYRLALTLPLLLVAGWLFAKKRQSTWWPFVWGFIFFALFAFFVELVPYLP SYGGYVRYAVGIVVTVLVGRYAILALNRYLERQRQAEALPDAQRREELSYDVALTRLAKGVCPGCERPVDLKNESIDFCP HCGIGLFDRCGHCRTRKSAFARFCHACGTPAGKAPPAGPLPERGAAPTQGQVSGPA
Sequences:
>Translated_376_residues MDQHKESDMGKSLRLSEKWFRRGLWLVSLVFASFLIGLGGTLVGDLPRVEAPLQLDDFLDRPAAEALRNEVRASDGAERQ ARAALEQAQLQRSKARSESQAAHESFNNWIATRSATQQSEHNPEVVARTQALDALKVREQQTQRAVEAQQQAALDARQAA AAARQRLEQMEAAGYEQMRVAHRKVELRVFLYRLALTLPLLLVAGWLFAKKRQSTWWPFVWGFIFFALFAFFVELVPYLP SYGGYVRYAVGIVVTVLVGRYAILALNRYLERQRQAEALPDAQRREELSYDVALTRLAKGVCPGCERPVDLKNESIDFCP HCGIGLFDRCGHCRTRKSAFARFCHACGTPAGKAPPAGPLPERGAAPTQGQVSGPA >Mature_376_residues MDQHKESDMGKSLRLSEKWFRRGLWLVSLVFASFLIGLGGTLVGDLPRVEAPLQLDDFLDRPAAEALRNEVRASDGAERQ ARAALEQAQLQRSKARSESQAAHESFNNWIATRSATQQSEHNPEVVARTQALDALKVREQQTQRAVEAQQQAALDARQAA AAARQRLEQMEAAGYEQMRVAHRKVELRVFLYRLALTLPLLLVAGWLFAKKRQSTWWPFVWGFIFFALFAFFVELVPYLP SYGGYVRYAVGIVVTVLVGRYAILALNRYLERQRQAEALPDAQRREELSYDVALTRLAKGVCPGCERPVDLKNESIDFCP HCGIGLFDRCGHCRTRKSAFARFCHACGTPAGKAPPAGPLPERGAAPTQGQVSGPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41934; Mature: 41934
Theoretical pI: Translated: 9.41; Mature: 9.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDQHKESDMGKSLRLSEKWFRRGLWLVSLVFASFLIGLGGTLVGDLPRVEAPLQLDDFLD CCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCHHHHHC RPAAEALRNEVRASDGAERQARAALEQAQLQRSKARSESQAAHESFNNWIATRSATQQSE CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC HNPEVVARTQALDALKVREQQTQRAVEAQQQAALDARQAAAAARQRLEQMEAAGYEQMRV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH AHRKVELRVFLYRLALTLPLLLVAGWLFAKKRQSTWWPFVWGFIFFALFAFFVELVPYLP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCC SYGGYVRYAVGIVVTVLVGRYAILALNRYLERQRQAEALPDAQRREELSYDVALTRLAKG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH VCPGCERPVDLKNESIDFCPHCGIGLFDRCGHCRTRKSAFARFCHACGTPAGKAPPAGPL CCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC PERGAAPTQGQVSGPA CCCCCCCCCCCCCCCC >Mature Secondary Structure MDQHKESDMGKSLRLSEKWFRRGLWLVSLVFASFLIGLGGTLVGDLPRVEAPLQLDDFLD CCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCHHHHHC RPAAEALRNEVRASDGAERQARAALEQAQLQRSKARSESQAAHESFNNWIATRSATQQSE CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC HNPEVVARTQALDALKVREQQTQRAVEAQQQAALDARQAAAAARQRLEQMEAAGYEQMRV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH AHRKVELRVFLYRLALTLPLLLVAGWLFAKKRQSTWWPFVWGFIFFALFAFFVELVPYLP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCC SYGGYVRYAVGIVVTVLVGRYAILALNRYLERQRQAEALPDAQRREELSYDVALTRLAKG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH VCPGCERPVDLKNESIDFCPHCGIGLFDRCGHCRTRKSAFARFCHACGTPAGKAPPAGPL CCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC PERGAAPTQGQVSGPA CCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA