| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120613096
Identifier: 120613096
GI number: 120613096
Start: 4958572
End: 4959150
Strand: Reverse
Name: 120613096
Synonym: Aave_4460
Alternate gene names: NA
Gene position: 4959150-4958572 (Counterclockwise)
Preceding gene: 120613097
Following gene: 120613095
Centisome position: 92.65
GC content: 77.89
Gene sequence:
>579_bases GTGAGCACCGCCGGGGCGCTGGCCGGGCGGGTGGCGCAGCCGCTGGCGCGCGTGATGACCGGCGTGCGCCGCTGGCTGCG CCGGCAGGAGCCGGCCACCCGCGCGCTGATGGACCGGCCCTCGCTCGCACGGCTGCGCCCCTGGCTGGAGCGGCGCCAGC TGCTCTGCCTGCGGCGCGAAGCCCTGGCGCGCGGCGCGGCGGCGGGGCTGTTCTGCGGGCTGATCCCCGGGCCACTGCAG ATCCCGGCCGCGGTCGCCACCTGCGCCGCATTGCGCGGCAACGCGGTGGCGGGCGCCGCGGCCACGCTCTACACGAACCC GCTGTCCACGCTGCCGCTCTACGCCCTCGCGTTCCAGGTGGGCGCCTGGGTGCTGCCGGGCGAGCAGCGGCTGCCGGCCT GGGAGGGCTGGTCCGCCACGGGCGGCGTGGAGGCCATGGCCACGTGGATGCACGCATTGGGCGCGCCGCTGGCCGTGGGC CTGCCCCTGCTGGCCCTGGCTTTTGCGGTGGCGGGGTATGCGGCGGTGCAGGCGCTTTGGCTGGTGCCGGTGTGGCACCG GGCGCAGAGGAGGCGGTGA
Upstream 100 bases:
>100_bases CCTTGATGAGCTGGCGCGGCGGCAACGAGCACCGCGACGTGGGCCTGCTGGCCGCCCTGACCGGCGCCTGGGGCGCCGCC ACCGCGGTGGCGGTGGCCCT
Downstream 100 bases:
>100_bases GGGGGCGGCCAGACATCCCTACACTGGCGGATCTTCGCGAGGCGCCATTCGCCGCCGCGATTCGCCCGTTGCTGGAGAGC CCGCATGCCGCTAGCCATTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 192; Mature: 191
Protein sequence:
>192_residues MSTAGALAGRVAQPLARVMTGVRRWLRRQEPATRALMDRPSLARLRPWLERRQLLCLRREALARGAAAGLFCGLIPGPLQ IPAAVATCAALRGNAVAGAAATLYTNPLSTLPLYALAFQVGAWVLPGEQRLPAWEGWSATGGVEAMATWMHALGAPLAVG LPLLALAFAVAGYAAVQALWLVPVWHRAQRRR
Sequences:
>Translated_192_residues MSTAGALAGRVAQPLARVMTGVRRWLRRQEPATRALMDRPSLARLRPWLERRQLLCLRREALARGAAAGLFCGLIPGPLQ IPAAVATCAALRGNAVAGAAATLYTNPLSTLPLYALAFQVGAWVLPGEQRLPAWEGWSATGGVEAMATWMHALGAPLAVG LPLLALAFAVAGYAAVQALWLVPVWHRAQRRR >Mature_191_residues STAGALAGRVAQPLARVMTGVRRWLRRQEPATRALMDRPSLARLRPWLERRQLLCLRREALARGAAAGLFCGLIPGPLQI PAAVATCAALRGNAVAGAAATLYTNPLSTLPLYALAFQVGAWVLPGEQRLPAWEGWSATGGVEAMATWMHALGAPLAVGL PLLALAFAVAGYAAVQALWLVPVWHRAQRRR
Specific function: Unknown
COG id: COG3216
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20513; Mature: 20382
Theoretical pI: Translated: 12.20; Mature: 12.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTAGALAGRVAQPLARVMTGVRRWLRRQEPATRALMDRPSLARLRPWLERRQLLCLRRE CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH ALARGAAAGLFCGLIPGPLQIPAAVATCAALRGNAVAGAAATLYTNPLSTLPLYALAFQV HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHH GAWVLPGEQRLPAWEGWSATGGVEAMATWMHALGAPLAVGLPLLALAFAVAGYAAVQALW HCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH LVPVWHRAQRRR HHHHHHHHHCCC >Mature Secondary Structure STAGALAGRVAQPLARVMTGVRRWLRRQEPATRALMDRPSLARLRPWLERRQLLCLRRE CCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH ALARGAAAGLFCGLIPGPLQIPAAVATCAALRGNAVAGAAATLYTNPLSTLPLYALAFQV HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHH GAWVLPGEQRLPAWEGWSATGGVEAMATWMHALGAPLAVGLPLLALAFAVAGYAAVQALW HCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH LVPVWHRAQRRR HHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA