Definition Acidovorax citrulli AAC00-1 chromosome, complete genome.
Accession NC_008752
Length 5,352,772

Click here to switch to the map view.

The map label for this gene is 120613096

Identifier: 120613096

GI number: 120613096

Start: 4958572

End: 4959150

Strand: Reverse

Name: 120613096

Synonym: Aave_4460

Alternate gene names: NA

Gene position: 4959150-4958572 (Counterclockwise)

Preceding gene: 120613097

Following gene: 120613095

Centisome position: 92.65

GC content: 77.89

Gene sequence:

>579_bases
GTGAGCACCGCCGGGGCGCTGGCCGGGCGGGTGGCGCAGCCGCTGGCGCGCGTGATGACCGGCGTGCGCCGCTGGCTGCG
CCGGCAGGAGCCGGCCACCCGCGCGCTGATGGACCGGCCCTCGCTCGCACGGCTGCGCCCCTGGCTGGAGCGGCGCCAGC
TGCTCTGCCTGCGGCGCGAAGCCCTGGCGCGCGGCGCGGCGGCGGGGCTGTTCTGCGGGCTGATCCCCGGGCCACTGCAG
ATCCCGGCCGCGGTCGCCACCTGCGCCGCATTGCGCGGCAACGCGGTGGCGGGCGCCGCGGCCACGCTCTACACGAACCC
GCTGTCCACGCTGCCGCTCTACGCCCTCGCGTTCCAGGTGGGCGCCTGGGTGCTGCCGGGCGAGCAGCGGCTGCCGGCCT
GGGAGGGCTGGTCCGCCACGGGCGGCGTGGAGGCCATGGCCACGTGGATGCACGCATTGGGCGCGCCGCTGGCCGTGGGC
CTGCCCCTGCTGGCCCTGGCTTTTGCGGTGGCGGGGTATGCGGCGGTGCAGGCGCTTTGGCTGGTGCCGGTGTGGCACCG
GGCGCAGAGGAGGCGGTGA

Upstream 100 bases:

>100_bases
CCTTGATGAGCTGGCGCGGCGGCAACGAGCACCGCGACGTGGGCCTGCTGGCCGCCCTGACCGGCGCCTGGGGCGCCGCC
ACCGCGGTGGCGGTGGCCCT

Downstream 100 bases:

>100_bases
GGGGGCGGCCAGACATCCCTACACTGGCGGATCTTCGCGAGGCGCCATTCGCCGCCGCGATTCGCCCGTTGCTGGAGAGC
CCGCATGCCGCTAGCCATTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 192; Mature: 191

Protein sequence:

>192_residues
MSTAGALAGRVAQPLARVMTGVRRWLRRQEPATRALMDRPSLARLRPWLERRQLLCLRREALARGAAAGLFCGLIPGPLQ
IPAAVATCAALRGNAVAGAAATLYTNPLSTLPLYALAFQVGAWVLPGEQRLPAWEGWSATGGVEAMATWMHALGAPLAVG
LPLLALAFAVAGYAAVQALWLVPVWHRAQRRR

Sequences:

>Translated_192_residues
MSTAGALAGRVAQPLARVMTGVRRWLRRQEPATRALMDRPSLARLRPWLERRQLLCLRREALARGAAAGLFCGLIPGPLQ
IPAAVATCAALRGNAVAGAAATLYTNPLSTLPLYALAFQVGAWVLPGEQRLPAWEGWSATGGVEAMATWMHALGAPLAVG
LPLLALAFAVAGYAAVQALWLVPVWHRAQRRR
>Mature_191_residues
STAGALAGRVAQPLARVMTGVRRWLRRQEPATRALMDRPSLARLRPWLERRQLLCLRREALARGAAAGLFCGLIPGPLQI
PAAVATCAALRGNAVAGAAATLYTNPLSTLPLYALAFQVGAWVLPGEQRLPAWEGWSATGGVEAMATWMHALGAPLAVGL
PLLALAFAVAGYAAVQALWLVPVWHRAQRRR

Specific function: Unknown

COG id: COG3216

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20513; Mature: 20382

Theoretical pI: Translated: 12.20; Mature: 12.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTAGALAGRVAQPLARVMTGVRRWLRRQEPATRALMDRPSLARLRPWLERRQLLCLRRE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
ALARGAAAGLFCGLIPGPLQIPAAVATCAALRGNAVAGAAATLYTNPLSTLPLYALAFQV
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHH
GAWVLPGEQRLPAWEGWSATGGVEAMATWMHALGAPLAVGLPLLALAFAVAGYAAVQALW
HCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
LVPVWHRAQRRR
HHHHHHHHHCCC
>Mature Secondary Structure 
STAGALAGRVAQPLARVMTGVRRWLRRQEPATRALMDRPSLARLRPWLERRQLLCLRRE
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
ALARGAAAGLFCGLIPGPLQIPAAVATCAALRGNAVAGAAATLYTNPLSTLPLYALAFQV
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHH
GAWVLPGEQRLPAWEGWSATGGVEAMATWMHALGAPLAVGLPLLALAFAVAGYAAVQALW
HCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
LVPVWHRAQRRR
HHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA