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The map label for this gene is 120613084

Identifier: 120613084

GI number: 120613084

Start: 4943669

End: 4945705

Strand: Reverse

Name: 120613084

Synonym: Aave_4448

Alternate gene names: NA

Gene position: 4945705-4943669 (Counterclockwise)

Preceding gene: 120613085

Following gene: 120613083

Centisome position: 92.4

GC content: 72.85

Gene sequence:

>2037_bases
ATGCTTCCTGCGCTGGCGGCCTGGGCGCAGGACGTGCCCGGTGCCGCCCGCGGCGATGGCGCTGCGGCGCTCCACGCTCC
CGTGCAGGCCGGCCCCGCGCTCACGCTGGGAACGGTGGAGGTGCGCGAGGGCCCCGGCGGCGCGCTGCCGGCGCGCAGCG
TGTCCACATCGGTGGACATCGTGGGCGGCGAGGTGCTGCAGGATGCCCGCGTGGACCATTCCTGGGAACTGCTGGGCCGC
GCGCCCGGGGTGCAGGTCACGCCGTTCCGACAGGGGACGGACGCGGGGCGGTTCTCCTTCCGCGGCTTCAATGGCGAGGG
CCGGGTGAATGCCGTCAAGCTGCTGATCGACGGGATCCCGTCGAACGACAACGCGGGCGGTATGCCGTTCCTGGATGCGG
TGTTCCCGCTCGATATCGAGGCGTTGGAGGTGGTGCGCGGCACGAACGACCCGCGCTACGGGCTCCACAACATCGCGGGC
AACGTGAACGTGATCACGCGCACGGGCGGCAACGAGGGCCGCGCGACGCTGACGGCGGGCAGCTTCGGCACGCGCGACCT
GCAGGTGGTCAAAGGCATCGAGTCGGGGCCGTGGAGCCAGAACTACGGCGTGTTCTGGCGCACGGGCGACGGCTGGCGCG
ACCATGCGGAAGGCACGCAGCGTGCGCTGTCGGGCAAGTGGTTTTACACCGATCCGGGCGGCGGCTGGCGCGCAGGCCTC
ACAGCGCGCTATTTCCGCAATGCGGCGGATGAGTCCGGCTACCTGACGCGCGAGCAGGCGGCGGCGCAGCCGCGCTGGTC
GCCGCCGTGGTCGGCCTCGGACCGCAGCACGCGCGAGACCGGGCAACTGGGGCTGCACTGGGAGGCCGAGCTGGCCGAGC
GGCTGTCTTGGACGGCGCGCGCGTACGCCAACCATTACGAGAACCAGCGCTGGGTGCGGTTCTCGCAGGCGGGCGTGCAG
CAGGAGCGCGACAACGACGAGGACCAGCGCGGGCTGTCGGGCGTGCTGACGTGGCGGCCCGCGGTGGCCTGGGCGCACGC
GTTCACGCTGGAAGGCGGGGTGGACGCGCAGTGGCAGGACAACGCCGCGCAGCGCTGGCGCACGGCCGGGCACGTGCACA
CTTCGCAGTTCCGGGACTGGGATTTCGACGTGCATACGCAGGGGGCGTACGTGCAGGCGGTGGTGCAGCCGGTGGCGTCG
CTGCGCATCGTGCCGGCGCTGCGCGTGGACCGGCTGGGCGGAGATTTCTCGGACCGGCTGACGGGGCAGCGCTACGGCAT
GCACGATTACGGCACCATCCGCCAGCCCAAGCTGGGCGTGGCCTGGACGGCCCGCGAGGGCGTGACGCTGTATGCGAATG
CGGGCCGCACCTTCCAGGTGGGCACGGGCATCGACGCCTACCGCACGCAGGCGCGCGACCTGGGCCCGTCGATCAACGAC
GGATGGGAGACGGGCGTGCGCTGGCAGCCCGCGCCGGGCTGGGAGGCGCGCGTGGCCACATGGCAGCAGCGCGCGTCGGG
CGAGGTCGCGCGCGTGCTGGGCGTGGACGGGCTGCCCGATCCCGGCGGGCTGGGCAACGTGGGACGCACGCGGCGCAAGG
GCTGGGACGCGCAGCTCAACGCCCGCCTGGGCGCGCGCTGGACGGGCTGGGTCGCCTATTCGCACCAGGTGGCGCGCATC
ACCGTGCCCGATCCGTCGGCGCCGGACACCGCCGGGCGGGAGGTGGAGAACGTGCCGCGCTACCTGGCGAGCGCGGGCGT
GCAGGTGCGCGCCACGGAGGTGCTGCGCCTGTCGGCCACGGTGACGGCGCAGGGCGACTATTACCTGGACCGCACCAACA
CCCAGGGCCGCGCGGGGCGCTACGCGCTGCTGGATCTGGGCGCGACCTGGCAGCTCTCGCCCGTGGCGGATGTGAGCGTG
CAGGTGCGCAACGCGACGAATCGCCGTTACGTCTATGCGTGGTATGACAGCGGCTCCTCGGGCTATTCGCCGGGCGACGG
CCGCAGCGTCGCCGTCAGCCTGGGCTGGAGGTTCTGA

Upstream 100 bases:

>100_bases
TCGTCGTCGTCATCTTCTTGTCTGTTCTTTTTCCTTCTTTCCGCCATCGGCCGCTGCGTTCGGCCGGGCCGCGCGCCGCA
CGGTGCCGCCGGCGCTGGCG

Downstream 100 bases:

>100_bases
ACATGGCATCGACGACGACCACCGCCACCACGGCGGCAACCCCCGCGGCGGACACCGGCGGCGGCGCTTCCCCGCCCCTG
CGCGCCGCGAGCTTCTACCG

Product: TonB-dependent receptor

Products: NA

Alternate protein names: Nb-Dependent Outer Membrane Receptor Protein; NB-Dependent Outer Membrane Receptor; NB-Dependent Receptor Domain Protein; NB-Dependent Receptor Plug; NB-Receptor Protein; Outer Membrane Receptor Protein; NB-Dependent Receptor YncD; Nb-Dependent Receptor; NB-Dependent Receptor Domain-Containing Protein; NB-Dependent Receptor For Iron Transport; NB-Dependent Siderophore Receptor Protein

Number of amino acids: Translated: 678; Mature: 678

Protein sequence:

>678_residues
MLPALAAWAQDVPGAARGDGAAALHAPVQAGPALTLGTVEVREGPGGALPARSVSTSVDIVGGEVLQDARVDHSWELLGR
APGVQVTPFRQGTDAGRFSFRGFNGEGRVNAVKLLIDGIPSNDNAGGMPFLDAVFPLDIEALEVVRGTNDPRYGLHNIAG
NVNVITRTGGNEGRATLTAGSFGTRDLQVVKGIESGPWSQNYGVFWRTGDGWRDHAEGTQRALSGKWFYTDPGGGWRAGL
TARYFRNAADESGYLTREQAAAQPRWSPPWSASDRSTRETGQLGLHWEAELAERLSWTARAYANHYENQRWVRFSQAGVQ
QERDNDEDQRGLSGVLTWRPAVAWAHAFTLEGGVDAQWQDNAAQRWRTAGHVHTSQFRDWDFDVHTQGAYVQAVVQPVAS
LRIVPALRVDRLGGDFSDRLTGQRYGMHDYGTIRQPKLGVAWTAREGVTLYANAGRTFQVGTGIDAYRTQARDLGPSIND
GWETGVRWQPAPGWEARVATWQQRASGEVARVLGVDGLPDPGGLGNVGRTRRKGWDAQLNARLGARWTGWVAYSHQVARI
TVPDPSAPDTAGREVENVPRYLASAGVQVRATEVLRLSATVTAQGDYYLDRTNTQGRAGRYALLDLGATWQLSPVADVSV
QVRNATNRRYVYAWYDSGSSGYSPGDGRSVAVSLGWRF

Sequences:

>Translated_678_residues
MLPALAAWAQDVPGAARGDGAAALHAPVQAGPALTLGTVEVREGPGGALPARSVSTSVDIVGGEVLQDARVDHSWELLGR
APGVQVTPFRQGTDAGRFSFRGFNGEGRVNAVKLLIDGIPSNDNAGGMPFLDAVFPLDIEALEVVRGTNDPRYGLHNIAG
NVNVITRTGGNEGRATLTAGSFGTRDLQVVKGIESGPWSQNYGVFWRTGDGWRDHAEGTQRALSGKWFYTDPGGGWRAGL
TARYFRNAADESGYLTREQAAAQPRWSPPWSASDRSTRETGQLGLHWEAELAERLSWTARAYANHYENQRWVRFSQAGVQ
QERDNDEDQRGLSGVLTWRPAVAWAHAFTLEGGVDAQWQDNAAQRWRTAGHVHTSQFRDWDFDVHTQGAYVQAVVQPVAS
LRIVPALRVDRLGGDFSDRLTGQRYGMHDYGTIRQPKLGVAWTAREGVTLYANAGRTFQVGTGIDAYRTQARDLGPSIND
GWETGVRWQPAPGWEARVATWQQRASGEVARVLGVDGLPDPGGLGNVGRTRRKGWDAQLNARLGARWTGWVAYSHQVARI
TVPDPSAPDTAGREVENVPRYLASAGVQVRATEVLRLSATVTAQGDYYLDRTNTQGRAGRYALLDLGATWQLSPVADVSV
QVRNATNRRYVYAWYDSGSSGYSPGDGRSVAVSLGWRF
>Mature_678_residues
MLPALAAWAQDVPGAARGDGAAALHAPVQAGPALTLGTVEVREGPGGALPARSVSTSVDIVGGEVLQDARVDHSWELLGR
APGVQVTPFRQGTDAGRFSFRGFNGEGRVNAVKLLIDGIPSNDNAGGMPFLDAVFPLDIEALEVVRGTNDPRYGLHNIAG
NVNVITRTGGNEGRATLTAGSFGTRDLQVVKGIESGPWSQNYGVFWRTGDGWRDHAEGTQRALSGKWFYTDPGGGWRAGL
TARYFRNAADESGYLTREQAAAQPRWSPPWSASDRSTRETGQLGLHWEAELAERLSWTARAYANHYENQRWVRFSQAGVQ
QERDNDEDQRGLSGVLTWRPAVAWAHAFTLEGGVDAQWQDNAAQRWRTAGHVHTSQFRDWDFDVHTQGAYVQAVVQPVAS
LRIVPALRVDRLGGDFSDRLTGQRYGMHDYGTIRQPKLGVAWTAREGVTLYANAGRTFQVGTGIDAYRTQARDLGPSIND
GWETGVRWQPAPGWEARVATWQQRASGEVARVLGVDGLPDPGGLGNVGRTRRKGWDAQLNARLGARWTGWVAYSHQVARI
TVPDPSAPDTAGREVENVPRYLASAGVQVRATEVLRLSATVTAQGDYYLDRTNTQGRAGRYALLDLGATWQLSPVADVSV
QVRNATNRRYVYAWYDSGSSGYSPGDGRSVAVSLGWRF

Specific function: Unknown

COG id: COG1629

COG function: function code P; Outer membrane receptor proteins, mostly Fe transport

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 73813; Mature: 73813

Theoretical pI: Translated: 8.56; Mature: 8.56

Prosite motif: PS00213 LIPOCALIN ; PS01156 TONB_DEPENDENT_REC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPALAAWAQDVPGAARGDGAAALHAPVQAGPALTLGTVEVREGPGGALPARSVSTSVDI
CCCHHHHHHHCCCCCCCCCCCEEEECCCCCCCEEEEEEEEEECCCCCCCCCCCCCCEEEE
VGGEVLQDARVDHSWELLGRAPGVQVTPFRQGTDAGRFSFRGFNGEGRVNAVKLLIDGIP
CCHHHHHHCCCCCCHHHHHCCCCCEEECCCCCCCCCCEEEECCCCCCCEEEEEEEEECCC
SNDNAGGMPFLDAVFPLDIEALEVVRGTNDPRYGLHNIAGNVNVITRTGGNEGRATLTAG
CCCCCCCCCHHHHCCCCCHHHHHHHHCCCCCCCCHHHCCCCEEEEEECCCCCCCEEEEEC
SFGTRDLQVVKGIESGPWSQNYGVFWRTGDGWRDHAEGTQRALSGKWFYTDPGGGWRAGL
CCCCCCHHEEECCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCC
TARYFRNAADESGYLTREQAAAQPRWSPPWSASDRSTRETGQLGLHWEAELAERLSWTAR
HHHHHHCCCCCCCCEEHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHH
AYANHYENQRWVRFSQAGVQQERDNDEDQRGLSGVLTWRPAVAWAHAFTLEGGVDAQWQD
HHHHHCCCCEEEEEHHHCCCHHCCCCHHHHCCCEEEEECCHHHEEEEEEECCCCCCCCCC
NAAQRWRTAGHVHTSQFRDWDFDVHTQGAYVQAVVQPVASLRIVPALRVDRLGGDFSDRL
CHHHHHHHCCCEECCCCCCCCCEEECCCHHHHHHHHHHHHEEEECCHHHHHCCCCHHHHC
TGQRYGMHDYGTIRQPKLGVAWTAREGVTLYANAGRTFQVGTGIDAYRTQARDLGPSIND
CCCCCCCCCCCCCCCCCCCEEEEECCCEEEEECCCCEEEECCCCHHHHHHHHHCCCCCCC
GWETGVRWQPAPGWEARVATWQQRASGEVARVLGVDGLPDPGGLGNVGRTRRKGWDAQLN
CCCCCCEECCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCHHHCCCCCEEE
ARLGARWTGWVAYSHQVARITVPDPSAPDTAGREVENVPRYLASAGVQVRATEVLRLSAT
CCCCCEEEEEEEECCEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEEEEEEEE
VTAQGDYYLDRTNTQGRAGRYALLDLGATWQLSPVADVSVQVRNATNRRYVYAWYDSGSS
EEECCCEEEECCCCCCCCCCEEEEECCCCEEECCCCCEEEEEECCCCCEEEEEEEECCCC
GYSPGDGRSVAVSLGWRF
CCCCCCCCEEEEEECCCC
>Mature Secondary Structure
MLPALAAWAQDVPGAARGDGAAALHAPVQAGPALTLGTVEVREGPGGALPARSVSTSVDI
CCCHHHHHHHCCCCCCCCCCCEEEECCCCCCCEEEEEEEEEECCCCCCCCCCCCCCEEEE
VGGEVLQDARVDHSWELLGRAPGVQVTPFRQGTDAGRFSFRGFNGEGRVNAVKLLIDGIP
CCHHHHHHCCCCCCHHHHHCCCCCEEECCCCCCCCCCEEEECCCCCCCEEEEEEEEECCC
SNDNAGGMPFLDAVFPLDIEALEVVRGTNDPRYGLHNIAGNVNVITRTGGNEGRATLTAG
CCCCCCCCCHHHHCCCCCHHHHHHHHCCCCCCCCHHHCCCCEEEEEECCCCCCCEEEEEC
SFGTRDLQVVKGIESGPWSQNYGVFWRTGDGWRDHAEGTQRALSGKWFYTDPGGGWRAGL
CCCCCCHHEEECCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCC
TARYFRNAADESGYLTREQAAAQPRWSPPWSASDRSTRETGQLGLHWEAELAERLSWTAR
HHHHHHCCCCCCCCEEHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHH
AYANHYENQRWVRFSQAGVQQERDNDEDQRGLSGVLTWRPAVAWAHAFTLEGGVDAQWQD
HHHHHCCCCEEEEEHHHCCCHHCCCCHHHHCCCEEEEECCHHHEEEEEEECCCCCCCCCC
NAAQRWRTAGHVHTSQFRDWDFDVHTQGAYVQAVVQPVASLRIVPALRVDRLGGDFSDRL
CHHHHHHHCCCEECCCCCCCCCEEECCCHHHHHHHHHHHHEEEECCHHHHHCCCCHHHHC
TGQRYGMHDYGTIRQPKLGVAWTAREGVTLYANAGRTFQVGTGIDAYRTQARDLGPSIND
CCCCCCCCCCCCCCCCCCCEEEEECCCEEEEECCCCEEEECCCCHHHHHHHHHCCCCCCC
GWETGVRWQPAPGWEARVATWQQRASGEVARVLGVDGLPDPGGLGNVGRTRRKGWDAQLN
CCCCCCEECCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCHHHCCCCCEEE
ARLGARWTGWVAYSHQVARITVPDPSAPDTAGREVENVPRYLASAGVQVRATEVLRLSAT
CCCCCEEEEEEEECCEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEEEEEEEE
VTAQGDYYLDRTNTQGRAGRYALLDLGATWQLSPVADVSVQVRNATNRRYVYAWYDSGSS
EEECCCEEEECCCCCCCCCCEEEEECCCCEEECCCCCEEEEEECCCCCEEEEEEEECCCC
GYSPGDGRSVAVSLGWRF
CCCCCCCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA