| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120613063
Identifier: 120613063
GI number: 120613063
Start: 4919343
End: 4920377
Strand: Reverse
Name: 120613063
Synonym: Aave_4427
Alternate gene names: NA
Gene position: 4920377-4919343 (Counterclockwise)
Preceding gene: 120613070
Following gene: 120613055
Centisome position: 91.92
GC content: 57.68
Gene sequence:
>1035_bases ATGACGAGAATCGATTCCGCGGCCATCCGGCCTCTGGCCAGTCATCGCGCGCCTGAGCATGAACCTGTGCCTTCGTCAAG CCAGCTCCAGGCCTCTCCCGCCAACGCGAATCCTTTATTCCCGAGGGGTAGAACACCGTCGTTCGGACAGACCCCATCTT CGGCCCCCCGGCAGCCATTATCGTGTTTGCAGCCCCCTGGAAATATTGCCCTGGAAACGCCGGGGAGCGTCGGCTCGGGC GGCGTGCAGGAGGTCGCCCTGAATCCGGTGTCTGACAGATTGCTGAAAAAATCGGATATGCGTCCTGGAGACATCCTGCT CTACGTCAATCCAAGAATTCCTCTTCCACTCGATGCGGGAATTGCTCTGGGGCATTACATGGGAAAGAAGCTCCAGCCGG AAAAGAATCGCGGAAATCACAACATCATCCATGCGGCGCTGTGGACGATGAGCCCGAAGCATGCGGGAGAAGGAAACGAG CAGGAAAATCAGGAACCGGAAGTGGTCGAAGCGCATGTGGGTCTTTCAAAGAAAAACCATGCGGTGATCGGCAACGTGCT CACCAAGGGCGACTACCTGGTATATCGGCCGAAAGACGTGAATCTGGGCGATTGGGCCTCGCAGATCGCGATGGTCTGGA GCAGCGAACGCAAGATTCCCTACAGTTTCGGCAAGGTGGTGAAAGCCGGTACCAAAAGCATGACCGCAAAAGGTCCGCAG TTCGACGAAGCCGCGCACGATCGCGCCAGCGCATACATGCAACAAGCCTTTGAAAGTGATCCGCTTTGGAAAAAGGAAGG CGCGTTCTGCTCCCACCTCGTGCTTGCCGCATACCAGGCGGCATTGCTGAACATACAGAATGCCAGAGATGAGGAAAGCG GCCAGGAACGGAGTTCCATCGAGGCCACGCTGGGGCAGCACGTCGAATTCCACGTGAATGCGAGCCGGACGACCCCCCTG AACCTGCACAGCCTCCTGCAGCAGGGACAGGCCTTCGAGCAGATAGGAAAAATCAGGATATCAGGCGCGGCGTGA
Upstream 100 bases:
>100_bases CCGGTGACGTCTGGTGATAGCCGATAAATTGCCGCGTTTCGCACCGACCGCACCGGCGGAAAATGTCCTGCACCTGCGCA AAAGTCTATTTGAAAATCAC
Downstream 100 bases:
>100_bases CGTCAGCATCACCCTGAACGCCGGTCGCCGGGCCATCGAAAGTGCCGGCTCAGAACGGCGCCACCGAATTGAACGCCCGC GCCAGCCACCCCATGGCCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 344; Mature: 343
Protein sequence:
>344_residues MTRIDSAAIRPLASHRAPEHEPVPSSSQLQASPANANPLFPRGRTPSFGQTPSSAPRQPLSCLQPPGNIALETPGSVGSG GVQEVALNPVSDRLLKKSDMRPGDILLYVNPRIPLPLDAGIALGHYMGKKLQPEKNRGNHNIIHAALWTMSPKHAGEGNE QENQEPEVVEAHVGLSKKNHAVIGNVLTKGDYLVYRPKDVNLGDWASQIAMVWSSERKIPYSFGKVVKAGTKSMTAKGPQ FDEAAHDRASAYMQQAFESDPLWKKEGAFCSHLVLAAYQAALLNIQNARDEESGQERSSIEATLGQHVEFHVNASRTTPL NLHSLLQQGQAFEQIGKIRISGAA
Sequences:
>Translated_344_residues MTRIDSAAIRPLASHRAPEHEPVPSSSQLQASPANANPLFPRGRTPSFGQTPSSAPRQPLSCLQPPGNIALETPGSVGSG GVQEVALNPVSDRLLKKSDMRPGDILLYVNPRIPLPLDAGIALGHYMGKKLQPEKNRGNHNIIHAALWTMSPKHAGEGNE QENQEPEVVEAHVGLSKKNHAVIGNVLTKGDYLVYRPKDVNLGDWASQIAMVWSSERKIPYSFGKVVKAGTKSMTAKGPQ FDEAAHDRASAYMQQAFESDPLWKKEGAFCSHLVLAAYQAALLNIQNARDEESGQERSSIEATLGQHVEFHVNASRTTPL NLHSLLQQGQAFEQIGKIRISGAA >Mature_343_residues TRIDSAAIRPLASHRAPEHEPVPSSSQLQASPANANPLFPRGRTPSFGQTPSSAPRQPLSCLQPPGNIALETPGSVGSGG VQEVALNPVSDRLLKKSDMRPGDILLYVNPRIPLPLDAGIALGHYMGKKLQPEKNRGNHNIIHAALWTMSPKHAGEGNEQ ENQEPEVVEAHVGLSKKNHAVIGNVLTKGDYLVYRPKDVNLGDWASQIAMVWSSERKIPYSFGKVVKAGTKSMTAKGPQF DEAAHDRASAYMQQAFESDPLWKKEGAFCSHLVLAAYQAALLNIQNARDEESGQERSSIEATLGQHVEFHVNASRTTPLN LHSLLQQGQAFEQIGKIRISGAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37281; Mature: 37150
Theoretical pI: Translated: 8.66; Mature: 8.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRIDSAAIRPLASHRAPEHEPVPSSSQLQASPANANPLFPRGRTPSFGQTPSSAPRQPL CCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH SCLQPPGNIALETPGSVGSGGVQEVALNPVSDRLLKKSDMRPGDILLYVNPRIPLPLDAG HHCCCCCCEEEECCCCCCCCCHHHHCCCHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCC IALGHYMGKKLQPEKNRGNHNIIHAALWTMSPKHAGEGNEQENQEPEVVEAHVGLSKKNH HHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCEEEHHCCCCCCCC AVIGNVLTKGDYLVYRPKDVNLGDWASQIAMVWSSERKIPYSFGKVVKAGTKSMTAKGPQ EEEEHEECCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHCCCCCC FDEAAHDRASAYMQQAFESDPLWKKEGAFCSHLVLAAYQAALLNIQNARDEESGQERSSI HHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH EATLGQHVEFHVNASRTTPLNLHSLLQQGQAFEQIGKIRISGAA HHHHCCCEEEEEECCCCCCCHHHHHHHCCHHHHHHCCEEECCCC >Mature Secondary Structure TRIDSAAIRPLASHRAPEHEPVPSSSQLQASPANANPLFPRGRTPSFGQTPSSAPRQPL CCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH SCLQPPGNIALETPGSVGSGGVQEVALNPVSDRLLKKSDMRPGDILLYVNPRIPLPLDAG HHCCCCCCEEEECCCCCCCCCHHHHCCCHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCC IALGHYMGKKLQPEKNRGNHNIIHAALWTMSPKHAGEGNEQENQEPEVVEAHVGLSKKNH HHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCEEEHHCCCCCCCC AVIGNVLTKGDYLVYRPKDVNLGDWASQIAMVWSSERKIPYSFGKVVKAGTKSMTAKGPQ EEEEHEECCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHCCCCCC FDEAAHDRASAYMQQAFESDPLWKKEGAFCSHLVLAAYQAALLNIQNARDEESGQERSSI HHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH EATLGQHVEFHVNASRTTPLNLHSLLQQGQAFEQIGKIRISGAA HHHHCCCEEEEEECCCCCCCHHHHHHHCCHHHHHHCCEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA