Click here to switch to the map view.

The map label for this gene is flgH [H]

Identifier: 120613062

GI number: 120613062

Start: 4918580

End: 4919293

Strand: Direct

Name: flgH [H]

Synonym: Aave_4426

Alternate gene names: 120613062

Gene position: 4918580-4919293 (Clockwise)

Preceding gene: 120613061

Following gene: 120613064

Centisome position: 91.89

GC content: 71.85

Gene sequence:

>714_bases
ATGCCGCACACCGCCTCCTCCGCCTTCCTCCGCGCCGCCCCGCTGCGCCTCGCCGCCGTGGCCGCCCTGCTGGCCGCCAC
GGGCTGCGCCTCCGTCAATCCGCCGCCGCCCATCGACATGCCGCCCACCCAGCCGCCGATCGCCGTGCAGACGGTACCCC
GCGCGACCGGGCCGGCCACCGGCAGCCTGTTCCACGCGGCCAGCTACCGGCCCGCGTTCGAGGACCGCCGCGCGCGGCTC
GTGGGCGACATCGTCACCATCCAGATCGTGGAGACGATCTCCGCATCGCAGAAGTCCAGTTCCAAGGTGGACCGCACGGC
CGCCAACACGGCCGGCGTGAGCGCCTTCCCCTTCATCGGCGCGGGCGATCTCGGCAAGCTGAAGCTGGGCGGCAACAGCA
CCAACAACTTCGAGGGCAAGGGCGACCTGCAGAGCTCCAACACCTTCACCGGCACCATCACCACCACGGTGGTGGAGGTG
CTGCCCAACGGCCACCTCGTGATCGCGGGAGAGAAGCAGATCGGCGTGGCCGAGAACGTGGACGTGCTGCGCTTCTCGGG
CACCGTGGACCCGCGCTCGCTGCAGCCGGGCAGCGTGGTCAGCTCCACCCTGGTGGCGAATGCCCGCGTGCAGTCGCGCG
GGCGGGGCTCACCGGCCGAAGCGCAGGCCATGGGGTGGCTGGCGCGGGCGTTCAATTCGGTGGCGCCGTTCTGA

Upstream 100 bases:

>100_bases
TGAATTCCAAGGCCATCCAGACATCCGACCAGATGCTGGCCAAGCTCGCGCAGCTGTGATTCGCGCCCTCCCCTTGCTGA
CGACCGCCGGGACACCGACC

Downstream 100 bases:

>100_bases
GCCGGCACTTTCGATGGCCCGGCGACCGGCGTTCAGGGTGATGCTGACGTCACGCCGCGCCTGATATCCTGATTTTTCCT
ATCTGCTCGAAGGCCTGTCC

Product: flagellar L-ring protein

Products: NA

Alternate protein names: Basal body L-ring protein [H]

Number of amino acids: Translated: 237; Mature: 236

Protein sequence:

>237_residues
MPHTASSAFLRAAPLRLAAVAALLAATGCASVNPPPPIDMPPTQPPIAVQTVPRATGPATGSLFHAASYRPAFEDRRARL
VGDIVTIQIVETISASQKSSSKVDRTAANTAGVSAFPFIGAGDLGKLKLGGNSTNNFEGKGDLQSSNTFTGTITTTVVEV
LPNGHLVIAGEKQIGVAENVDVLRFSGTVDPRSLQPGSVVSSTLVANARVQSRGRGSPAEAQAMGWLARAFNSVAPF

Sequences:

>Translated_237_residues
MPHTASSAFLRAAPLRLAAVAALLAATGCASVNPPPPIDMPPTQPPIAVQTVPRATGPATGSLFHAASYRPAFEDRRARL
VGDIVTIQIVETISASQKSSSKVDRTAANTAGVSAFPFIGAGDLGKLKLGGNSTNNFEGKGDLQSSNTFTGTITTTVVEV
LPNGHLVIAGEKQIGVAENVDVLRFSGTVDPRSLQPGSVVSSTLVANARVQSRGRGSPAEAQAMGWLARAFNSVAPF
>Mature_236_residues
PHTASSAFLRAAPLRLAAVAALLAATGCASVNPPPPIDMPPTQPPIAVQTVPRATGPATGSLFHAASYRPAFEDRRARLV
GDIVTIQIVETISASQKSSSKVDRTAANTAGVSAFPFIGAGDLGKLKLGGNSTNNFEGKGDLQSSNTFTGTITTTVVEVL
PNGHLVIAGEKQIGVAENVDVLRFSGTVDPRSLQPGSVVSSTLVANARVQSRGRGSPAEAQAMGWLARAFNSVAPF

Specific function: Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation [H]

COG id: COG2063

COG function: function code N; Flagellar basal body L-ring protein

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor (Probable). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flgH family [H]

Homologues:

Organism=Escherichia coli, GI1787319, Length=222, Percent_Identity=40.5405405405405, Blast_Score=142, Evalue=3e-35,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000527 [H]

Pfam domain/function: PF02107 FlgH [H]

EC number: NA

Molecular weight: Translated: 24355; Mature: 24224

Theoretical pI: Translated: 10.54; Mature: 10.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPHTASSAFLRAAPLRLAAVAALLAATGCASVNPPPPIDMPPTQPPIAVQTVPRATGPAT
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCC
GSLFHAASYRPAFEDRRARLVGDIVTIQIVETISASQKSSSKVDRTAANTAGVSAFPFIG
CCEEECCCCCCCHHHHHHHHHHHHEEEEEHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCC
AGDLGKLKLGGNSTNNFEGKGDLQSSNTFTGTITTTVVEVLPNGHLVIAGEKQIGVAENV
CCCCCEEEECCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHCCCCCEEEECCCCCCCCCCC
DVLRFSGTVDPRSLQPGSVVSSTLVANARVQSRGRGSPAEAQAMGWLARAFNSVAPF
EEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
PHTASSAFLRAAPLRLAAVAALLAATGCASVNPPPPIDMPPTQPPIAVQTVPRATGPAT
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCC
GSLFHAASYRPAFEDRRARLVGDIVTIQIVETISASQKSSSKVDRTAANTAGVSAFPFIG
CCEEECCCCCCCHHHHHHHHHHHHEEEEEHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCC
AGDLGKLKLGGNSTNNFEGKGDLQSSNTFTGTITTTVVEVLPNGHLVIAGEKQIGVAENV
CCCCCEEEECCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHCCCCCEEEECCCCCCCCCCC
DVLRFSGTVDPRSLQPGSVVSSTLVANARVQSRGRGSPAEAQAMGWLARAFNSVAPF
EEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11823852 [H]