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The map label for this gene is yacF [C]

Identifier: 120612328

GI number: 120612328

Start: 4061720

End: 4062517

Strand: Direct

Name: yacF [C]

Synonym: Aave_3684

Alternate gene names: 120612328

Gene position: 4061720-4062517 (Clockwise)

Preceding gene: 120612327

Following gene: 120612329

Centisome position: 75.88

GC content: 66.42

Gene sequence:

>798_bases
ATGCTGGCGGCGCCAGCCGTGCGCCCCCAGGAACCCTGCAGCGTGATTCTTTACGAATACCCCTTCAACGAACGCCTCAG
AACCTACCTGCGGCTGGAACAGCTCTTCCGGCGCCTGGGCGAGCTGATTCCCAGGCCGCACCCGCTGGACCACCATTTCG
CGCTCGTGACCCTGTTCGAGATCATGGACGTGGCGGCCCGCGCCGACCTGAAGTCCGACGTACTCAAGGACCTGGAAAAG
CAGCGCCACCAGCTCGACGGCTACCGGGGCAATCCCTCGATCTCGGAGGCGGTGCTCGACGGCGTCATCGCCCAGATCGA
CCACTGCTTCTCGACACTGAACGCGCAGACCGGCAAGGCAGGCCAGCCCCTGACCGAGAACGAATGGCTGATGAGCATCC
GCAGCCGCGTGGGCATTCCCGGGGGCACCTGCGGCTTCGATCTGCCCGCCTATTACGCCTGGCAGCACCATGCGCCCGAA
AAGCGGCAGCACGACCTCGAGGGCTGGGCGAACCATCTCGCGCCGCTGGCCGAATCGCTGTACGTGCTGCTGAAGCTGCT
GCGCGATTCGGGCATGCCCCAGAAGGTGGCGGCCGACCACGGACAGTTCCAGCAGGCCCTGCCCCAGGGGCGCACCTTCC
AGCTGCTGCGGCTGCGGATCGATCCCGCCTGGAACATGGTGCCGGAGATCAGCGGCAACCGGCTCATCGTTTCCGTGAGG
CTCATGCGGCAGGACGCCGACGGCAAGCTGCAGCCCGTGCAGGAAGACGCGGCCTTCGAACTCACGCTCTGCGCGTGA

Upstream 100 bases:

>100_bases
GTGCTCCACAACGACCGAATACCTTTGGATACCCTGCGGACGGAGGTCCGGCGAATCGCCGATGGCTTCGGGCTATGATG
CGGGCGATATGGGATGCGCG

Downstream 100 bases:

>100_bases
CGACAGCCCGCACGAGAGTTTCACCCATGACTTCGCGCAACGACGACTCCCGCAAGGCGGCAGCGCCGGCCCCGGCCTCC
CGCCAGCTCTGGGTGGACTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 265; Mature: 265

Protein sequence:

>265_residues
MLAAPAVRPQEPCSVILYEYPFNERLRTYLRLEQLFRRLGELIPRPHPLDHHFALVTLFEIMDVAARADLKSDVLKDLEK
QRHQLDGYRGNPSISEAVLDGVIAQIDHCFSTLNAQTGKAGQPLTENEWLMSIRSRVGIPGGTCGFDLPAYYAWQHHAPE
KRQHDLEGWANHLAPLAESLYVLLKLLRDSGMPQKVAADHGQFQQALPQGRTFQLLRLRIDPAWNMVPEISGNRLIVSVR
LMRQDADGKLQPVQEDAAFELTLCA

Sequences:

>Translated_265_residues
MLAAPAVRPQEPCSVILYEYPFNERLRTYLRLEQLFRRLGELIPRPHPLDHHFALVTLFEIMDVAARADLKSDVLKDLEK
QRHQLDGYRGNPSISEAVLDGVIAQIDHCFSTLNAQTGKAGQPLTENEWLMSIRSRVGIPGGTCGFDLPAYYAWQHHAPE
KRQHDLEGWANHLAPLAESLYVLLKLLRDSGMPQKVAADHGQFQQALPQGRTFQLLRLRIDPAWNMVPEISGNRLIVSVR
LMRQDADGKLQPVQEDAAFELTLCA
>Mature_265_residues
MLAAPAVRPQEPCSVILYEYPFNERLRTYLRLEQLFRRLGELIPRPHPLDHHFALVTLFEIMDVAARADLKSDVLKDLEK
QRHQLDGYRGNPSISEAVLDGVIAQIDHCFSTLNAQTGKAGQPLTENEWLMSIRSRVGIPGGTCGFDLPAYYAWQHHAPE
KRQHDLEGWANHLAPLAESLYVLLKLLRDSGMPQKVAADHGQFQQALPQGRTFQLLRLRIDPAWNMVPEISGNRLIVSVR
LMRQDADGKLQPVQEDAAFELTLCA

Specific function: Unknown

COG id: COG4582

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0289 family [H]

Homologues:

Organism=Escherichia coli, GI1786291, Length=252, Percent_Identity=32.1428571428571, Blast_Score=133, Evalue=1e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009777 [H]

Pfam domain/function: PF07072 DUF1342 [H]

EC number: NA

Molecular weight: Translated: 29987; Mature: 29987

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAAPAVRPQEPCSVILYEYPFNERLRTYLRLEQLFRRLGELIPRPHPLDHHFALVTLFE
CCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
IMDVAARADLKSDVLKDLEKQRHQLDGYRGNPSISEAVLDGVIAQIDHCFSTLNAQTGKA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
GQPLTENEWLMSIRSRVGIPGGTCGFDLPAYYAWQHHAPEKRQHDLEGWANHLAPLAESL
CCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
YVLLKLLRDSGMPQKVAADHGQFQQALPQGRTFQLLRLRIDPAWNMVPEISGNRLIVSVR
HHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCEEEEEEE
LMRQDADGKLQPVQEDAAFELTLCA
EECCCCCCCCCCCCCCCCEEEEECC
>Mature Secondary Structure
MLAAPAVRPQEPCSVILYEYPFNERLRTYLRLEQLFRRLGELIPRPHPLDHHFALVTLFE
CCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
IMDVAARADLKSDVLKDLEKQRHQLDGYRGNPSISEAVLDGVIAQIDHCFSTLNAQTGKA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
GQPLTENEWLMSIRSRVGIPGGTCGFDLPAYYAWQHHAPEKRQHDLEGWANHLAPLAESL
CCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
YVLLKLLRDSGMPQKVAADHGQFQQALPQGRTFQLLRLRIDPAWNMVPEISGNRLIVSVR
HHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCEEEEEEE
LMRQDADGKLQPVQEDAAFELTLCA
EECCCCCCCCCCCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11823852 [H]