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The map label for this gene is yhdE [C]

Identifier: 120611856

GI number: 120611856

Start: 3526516

End: 3527124

Strand: Reverse

Name: yhdE [C]

Synonym: Aave_3197

Alternate gene names: 120611856

Gene position: 3527124-3526516 (Counterclockwise)

Preceding gene: 120611857

Following gene: 120611855

Centisome position: 65.89

GC content: 75.53

Gene sequence:

>609_bases
GTGTACCTGGCCTCCCAGAGCCCGCGGCGCCGCCAGCTGCTCGACCAGATCGGCGTGCGGCACGTGCTGCTGCTGCCCAA
CGCCGATGGCGACGCCGTCGTGGAAGACGCCGAGGCCATCGAGGCGCCCCGGCCCGGCGAGGCGCCCGCGCGCTACGTGC
AGCGCGTGACCGGCCTCAAGCTGGATGCGGCCGTGGCGCGGCATGCGCGGCGCGGCCTGGAGCCCGCGCCCATCCTGTGC
TCCGACACCACCGTGGCCCTGGGCCGCGACATCCTCGGCAAGCCCGAGGACGAGGCGCATGCGCGGCAGATGCTCGCGCG
CCTGTCCGGCAGCACCCACCGCGTGCTCACCGCGGTGGCCGTGCAGGTGCCGGGCGGCGCGCGCCACGCGGCGCTGTCGG
TATCGCAGGTGCGCTTCGCGCCGATGACCGCGGAGCAGATCGCGGCCTACGCCGCCAGCGGCGATCCGCTGGGCAAGGCC
GGCGCCTACGGCATCCAGGGTCCCGCCGCCCGCTACGTGGAGCGCATCGCCGGCAGCTACACCGGCATCATGGGCCTGCC
GCTGTTCGAGACGGCGCAACTGCTGCGGCAGGCCGGCATGCCCGGCTGA

Upstream 100 bases:

>100_bases
CGCCGGCATCCGCTATCCTGCCGCCGTGAAACCGAACCCATCCTCCCCTTCCTCCGCCGCCTCCACCACCTCCGCCACGC
AGGCCACCGCGCCGTCCTTC

Downstream 100 bases:

>100_bases
AGGTGGCCGGGCCCCGGGGCACAGGCCGGGGCAGGGCGTGAATCCCGTTCCCGGCGAACGGGGGGCCGTTGAGGCATCAT
CGGTTCCCGAGCACCTGCTC

Product: maf protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MYLASQSPRRRQLLDQIGVRHVLLLPNADGDAVVEDAEAIEAPRPGEAPARYVQRVTGLKLDAAVARHARRGLEPAPILC
SDTTVALGRDILGKPEDEAHARQMLARLSGSTHRVLTAVAVQVPGGARHAALSVSQVRFAPMTAEQIAAYAASGDPLGKA
GAYGIQGPAARYVERIAGSYTGIMGLPLFETAQLLRQAGMPG

Sequences:

>Translated_202_residues
MYLASQSPRRRQLLDQIGVRHVLLLPNADGDAVVEDAEAIEAPRPGEAPARYVQRVTGLKLDAAVARHARRGLEPAPILC
SDTTVALGRDILGKPEDEAHARQMLARLSGSTHRVLTAVAVQVPGGARHAALSVSQVRFAPMTAEQIAAYAASGDPLGKA
GAYGIQGPAARYVERIAGSYTGIMGLPLFETAQLLRQAGMPG
>Mature_202_residues
MYLASQSPRRRQLLDQIGVRHVLLLPNADGDAVVEDAEAIEAPRPGEAPARYVQRVTGLKLDAAVARHARRGLEPAPILC
SDTTVALGRDILGKPEDEAHARQMLARLSGSTHRVLTAVAVQVPGGARHAALSVSQVRFAPMTAEQIAAYAASGDPLGKA
GAYGIQGPAARYVERIAGSYTGIMGLPLFETAQLLRQAGMPG

Specific function: Unknown

COG id: COG0424

COG function: function code D; Nucleotide-binding protein implicated in inhibition of septum formation

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the maf family [H]

Homologues:

Organism=Homo sapiens, GI117553627, Length=207, Percent_Identity=29.951690821256, Blast_Score=87, Evalue=1e-17,
Organism=Homo sapiens, GI291045181, Length=134, Percent_Identity=33.5820895522388, Blast_Score=81, Evalue=5e-16,
Organism=Homo sapiens, GI310133124, Length=134, Percent_Identity=33.5820895522388, Blast_Score=80, Evalue=1e-15,
Organism=Homo sapiens, GI291045183, Length=206, Percent_Identity=29.126213592233, Blast_Score=76, Evalue=2e-14,
Organism=Escherichia coli, GI1789646, Length=197, Percent_Identity=43.1472081218274, Blast_Score=136, Evalue=1e-33,
Organism=Escherichia coli, GI87081830, Length=201, Percent_Identity=28.3582089552239, Blast_Score=69, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI193202443, Length=197, Percent_Identity=31.4720812182741, Blast_Score=93, Evalue=1e-19,
Organism=Drosophila melanogaster, GI78706856, Length=191, Percent_Identity=38.7434554973822, Blast_Score=117, Evalue=4e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003697 [H]

Pfam domain/function: PF02545 Maf [H]

EC number: NA

Molecular weight: Translated: 21289; Mature: 21289

Theoretical pI: Translated: 9.44; Mature: 9.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYLASQSPRRRQLLDQIGVRHVLLLPNADGDAVVEDAEAIEAPRPGEAPARYVQRVTGLK
CCCCCCCCHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCC
LDAAVARHARRGLEPAPILCSDTTVALGRDILGKPEDEAHARQMLARLSGSTHRVLTAVA
HHHHHHHHHHHCCCCCCEEECCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHE
VQVPGGARHAALSVSQVRFAPMTAEQIAAYAASGDPLGKAGAYGIQGPAARYVERIAGSY
EECCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCC
TGIMGLPLFETAQLLRQAGMPG
CCHHCCCHHHHHHHHHHCCCCC
>Mature Secondary Structure
MYLASQSPRRRQLLDQIGVRHVLLLPNADGDAVVEDAEAIEAPRPGEAPARYVQRVTGLK
CCCCCCCCHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCC
LDAAVARHARRGLEPAPILCSDTTVALGRDILGKPEDEAHARQMLARLSGSTHRVLTAVA
HHHHHHHHHHHCCCCCCEEECCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHE
VQVPGGARHAALSVSQVRFAPMTAEQIAAYAASGDPLGKAGAYGIQGPAARYVERIAGSY
EECCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCC
TGIMGLPLFETAQLLRQAGMPG
CCHHCCCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA