Definition Acidovorax citrulli AAC00-1 chromosome, complete genome.
Accession NC_008752
Length 5,352,772

Click here to switch to the map view.

The map label for this gene is 120611854

Identifier: 120611854

GI number: 120611854

Start: 3524483

End: 3524890

Strand: Direct

Name: 120611854

Synonym: Aave_3195

Alternate gene names: NA

Gene position: 3524483-3524890 (Clockwise)

Preceding gene: 120611853

Following gene: 120611862

Centisome position: 65.84

GC content: 58.82

Gene sequence:

>408_bases
ATGAAGCTCTCCCACCTCAAGAAAGTGCCCTGCATCGTCTGGTGCCTGGGCCTGAATGCGTTGTTCCTGGCAGGCTGGGC
TTTGGCAACGCCCACCTTCGCAGATGCTGAAAACAGCCCGCACCGGGTGTACCGCCTGGAGTTCCACAAAGCCTCTTTCC
TGCAGCGCATCACCCATCCGCGCTTCAAGATGCCTTACGTAGTGCGGCTGTATCGCATCGAGCCCAAGACCTTGCTGGGC
CAGAGTGAAGTGGTCGATCTCTGGCTGAATGGCGAAATCCAATGGTATTTGGACCCGCCGGTTGACATGAACCGCGTACG
TGTCGGTCGCGATGTACTCTTCGAAAGCATCCCGTCGGAATGCTCGGAAGCGGCGCAGATACCGGGCTGCCCCAACACCA
AGCCCTGA

Upstream 100 bases:

>100_bases
ACATCCCGTCGGAATGCACTGCGGCAGGGCACATACCAGGTTGCCCCAACACCAAGCCCTGACGATCGCTTCCCATGGCA
CTACATCGCGCAGAGCGGCA

Downstream 100 bases:

>100_bases
CCCTCACAACAACACGATGTCGTACTGCTCCTGCCCCAGCCCACTCTCCGCCTGCAGCGATATCGGCTTGCCGATGAAAT
CCGACAAGCCCGCCAGATGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 135; Mature: 135

Protein sequence:

>135_residues
MKLSHLKKVPCIVWCLGLNALFLAGWALATPTFADAENSPHRVYRLEFHKASFLQRITHPRFKMPYVVRLYRIEPKTLLG
QSEVVDLWLNGEIQWYLDPPVDMNRVRVGRDVLFESIPSECSEAAQIPGCPNTKP

Sequences:

>Translated_135_residues
MKLSHLKKVPCIVWCLGLNALFLAGWALATPTFADAENSPHRVYRLEFHKASFLQRITHPRFKMPYVVRLYRIEPKTLLG
QSEVVDLWLNGEIQWYLDPPVDMNRVRVGRDVLFESIPSECSEAAQIPGCPNTKP
>Mature_135_residues
MKLSHLKKVPCIVWCLGLNALFLAGWALATPTFADAENSPHRVYRLEFHKASFLQRITHPRFKMPYVVRLYRIEPKTLLG
QSEVVDLWLNGEIQWYLDPPVDMNRVRVGRDVLFESIPSECSEAAQIPGCPNTKP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15490; Mature: 15490

Theoretical pI: Translated: 8.64; Mature: 8.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLSHLKKVPCIVWCLGLNALFLAGWALATPTFADAENSPHRVYRLEFHKASFLQRITHP
CCCCHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEHHHHHHHHHHCCC
RFKMPYVVRLYRIEPKTLLGQSEVVDLWLNGEIQWYLDPPVDMNRVRVGRDVLFESIPSE
CCCCCEEEEEEEECCHHHCCCCEEEEEEECCEEEEEECCCCCCHHHHHHHHHHHHHCCHH
CSEAAQIPGCPNTKP
HHHHHCCCCCCCCCC
>Mature Secondary Structure
MKLSHLKKVPCIVWCLGLNALFLAGWALATPTFADAENSPHRVYRLEFHKASFLQRITHP
CCCCHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEHHHHHHHHHHCCC
RFKMPYVVRLYRIEPKTLLGQSEVVDLWLNGEIQWYLDPPVDMNRVRVGRDVLFESIPSE
CCCCCEEEEEEEECCHHHCCCCEEEEEEECCEEEEEECCCCCCHHHHHHHHHHHHHCCHH
CSEAAQIPGCPNTKP
HHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA