Definition Acidovorax citrulli AAC00-1 chromosome, complete genome.
Accession NC_008752
Length 5,352,772

Click here to switch to the map view.

The map label for this gene is 120611812

Identifier: 120611812

GI number: 120611812

Start: 3480143

End: 3481144

Strand: Direct

Name: 120611812

Synonym: Aave_3152

Alternate gene names: NA

Gene position: 3480143-3481144 (Clockwise)

Preceding gene: 120611811

Following gene: 120611815

Centisome position: 65.02

GC content: 70.46

Gene sequence:

>1002_bases
ATGATCCGTTCGCTGATTTCGTTCACCGCCCTCGCCTTCGCGCTGGGCGCCGCCACGGCCCAGACCGCGCCGGCCGCCTC
CACCCCCGCGCCCGCGGGCGCCGCCTACCCGGCCAAGCCGGTGCGCCTCATCGTGCCCTTCCCGCCCGGCGGCGGCACCG
ACATCCTCTCGCGCCTCGTGGCGACCAGGCTGACCGAGACGCTGCACTGGACCGTGGTGCCCGACAACCGCGCCGGCGCG
GGCGGCACCATCGGCATCACCGAGGCCGTGAAGGCCGCGCCCACGGGCTACGACCTCGTCATGGGCCAGAAGGACAACCT
CGTCGTCGCGCCCTACCTCTACAAGAACCTGCCGTGGGACCCCACCAAGGACCTCGTCGCCATCGCGCACGTGGCCTATA
CGCCGGTCATCATCGCCACGAGCGCGAACTCGCGCTTCAAGACGCTGGCCGACGTGGTGGCGGCCGCGCGCGCCGAGCCC
GGCAAGATCACCTACGGCTCGCCCGGCAACGGCACCACCATCCACCTCGCGGGCGACCTGTTCGAGAAGGCCGCGGGCAT
CAAGCTCAGCCACATCCCCTACAAGGGCTCCAACCCGGCCCTGATGGACGCGCTGGCCGGCAACGTGGACCTGCTGGTGT
CGTCCGTGCCGTCCGCCATGGCGCAGATCAAGTCCGGCAAGCTGCGCCCGCTGGCCGTCACCTCGATCAAGCGCAGCTCC
TCGCTGCCCGACGTGCCCACCGTGGCCGAGTCCGGCTACAAGGGCTTCGACGTGAGTTCCTGGTACGGCATCCTCGCCCC
CGCCGGCACGCCCGCGAACGTGGTCGCCACCGTGAACACCGAGGTCAACAAGCTGCTCGCCCAGCCCGACATGCGCGCTG
CCATCCAGGCCCAGGGCGCCGAACCCGAAACGATGACCAGCGCGCAGTTCTCCGCCCTGATCAAGGCGGACTACGCCAAG
TGGAAGGGCATCGTGGAGGCGTCCGGCGCGAAGATCGAGTGA

Upstream 100 bases:

>100_bases
TGGCCGACGTGCGCGAGGCCTGAGCGCCCCCCGCGCATGAGAAACTAGGCCGCGCCGCCCGCCCGCGGGACAGGCGTTCC
TTTCCCGGAGACAAACACCC

Downstream 100 bases:

>100_bases
ACATGGCCGGCCGGCCCTGACCGCCGGCCCGCCCGGGGCTCTGCCATGGCGTATCGAAATGTGTTCTGATGCGGGCCTGC
GCGCACCGCCGCGTTCCACG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 333; Mature: 333

Protein sequence:

>333_residues
MIRSLISFTALAFALGAATAQTAPAASTPAPAGAAYPAKPVRLIVPFPPGGGTDILSRLVATRLTETLHWTVVPDNRAGA
GGTIGITEAVKAAPTGYDLVMGQKDNLVVAPYLYKNLPWDPTKDLVAIAHVAYTPVIIATSANSRFKTLADVVAAARAEP
GKITYGSPGNGTTIHLAGDLFEKAAGIKLSHIPYKGSNPALMDALAGNVDLLVSSVPSAMAQIKSGKLRPLAVTSIKRSS
SLPDVPTVAESGYKGFDVSSWYGILAPAGTPANVVATVNTEVNKLLAQPDMRAAIQAQGAEPETMTSAQFSALIKADYAK
WKGIVEASGAKIE

Sequences:

>Translated_333_residues
MIRSLISFTALAFALGAATAQTAPAASTPAPAGAAYPAKPVRLIVPFPPGGGTDILSRLVATRLTETLHWTVVPDNRAGA
GGTIGITEAVKAAPTGYDLVMGQKDNLVVAPYLYKNLPWDPTKDLVAIAHVAYTPVIIATSANSRFKTLADVVAAARAEP
GKITYGSPGNGTTIHLAGDLFEKAAGIKLSHIPYKGSNPALMDALAGNVDLLVSSVPSAMAQIKSGKLRPLAVTSIKRSS
SLPDVPTVAESGYKGFDVSSWYGILAPAGTPANVVATVNTEVNKLLAQPDMRAAIQAQGAEPETMTSAQFSALIKADYAK
WKGIVEASGAKIE
>Mature_333_residues
MIRSLISFTALAFALGAATAQTAPAASTPAPAGAAYPAKPVRLIVPFPPGGGTDILSRLVATRLTETLHWTVVPDNRAGA
GGTIGITEAVKAAPTGYDLVMGQKDNLVVAPYLYKNLPWDPTKDLVAIAHVAYTPVIIATSANSRFKTLADVVAAARAEP
GKITYGSPGNGTTIHLAGDLFEKAAGIKLSHIPYKGSNPALMDALAGNVDLLVSSVPSAMAQIKSGKLRPLAVTSIKRSS
SLPDVPTVAESGYKGFDVSSWYGILAPAGTPANVVATVNTEVNKLLAQPDMRAAIQAQGAEPETMTSAQFSALIKADYAK
WKGIVEASGAKIE

Specific function: Unknown

COG id: COG3181

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0065 (bug) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005064 [H]

Pfam domain/function: PF03401 Bug [H]

EC number: NA

Molecular weight: Translated: 34385; Mature: 34385

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRSLISFTALAFALGAATAQTAPAASTPAPAGAAYPAKPVRLIVPFPPGGGTDILSRLV
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHH
ATRLTETLHWTVVPDNRAGAGGTIGITEAVKAAPTGYDLVMGQKDNLVVAPYLYKNLPWD
HHHHHHHEEEEEEECCCCCCCCCEEHHHHHHCCCCCCEEEECCCCCEEECHHHHCCCCCC
PTKDLVAIAHVAYTPVIIATSANSRFKTLADVVAAARAEPGKITYGSPGNGTTIHLAGDL
CCHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCEEEEEHHH
FEKAAGIKLSHIPYKGSNPALMDALAGNVDLLVSSVPSAMAQIKSGKLRPLAVTSIKRSS
HHHHCCCEEEECCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHCC
SLPDVPTVAESGYKGFDVSSWYGILAPAGTPANVVATVNTEVNKLLAQPDMRAAIQAQGA
CCCCCCHHHHCCCCCCCCCCCCEEEECCCCCCEEEEEECHHHHHHHCCCCHHHHHHCCCC
EPETMTSAQFSALIKADYAKWKGIVEASGAKIE
CCCHHHHHHHHHHHHHHHHHHCCEEECCCCCCC
>Mature Secondary Structure
MIRSLISFTALAFALGAATAQTAPAASTPAPAGAAYPAKPVRLIVPFPPGGGTDILSRLV
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHH
ATRLTETLHWTVVPDNRAGAGGTIGITEAVKAAPTGYDLVMGQKDNLVVAPYLYKNLPWD
HHHHHHHEEEEEEECCCCCCCCCEEHHHHHHCCCCCCEEEECCCCCEEECHHHHCCCCCC
PTKDLVAIAHVAYTPVIIATSANSRFKTLADVVAAARAEPGKITYGSPGNGTTIHLAGDL
CCHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCEEEEEHHH
FEKAAGIKLSHIPYKGSNPALMDALAGNVDLLVSSVPSAMAQIKSGKLRPLAVTSIKRSS
HHHHCCCEEEECCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHCC
SLPDVPTVAESGYKGFDVSSWYGILAPAGTPANVVATVNTEVNKLLAQPDMRAAIQAQGA
CCCCCCHHHHCCCCCCCCCCCCEEEECCCCCCEEEEEECHHHHHHHCCCCHHHHHHCCCC
EPETMTSAQFSALIKADYAKWKGIVEASGAKIE
CCCHHHHHHHHHHHHHHHHHHCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2013566 [H]