| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is katB [H]
Identifier: 120611797
GI number: 120611797
Start: 3461461
End: 3462984
Strand: Reverse
Name: katB [H]
Synonym: Aave_3137
Alternate gene names: 120611797
Gene position: 3462984-3461461 (Counterclockwise)
Preceding gene: 120611798
Following gene: 120611796
Centisome position: 64.7
GC content: 65.75
Gene sequence:
>1524_bases ATGAAATTCCAGAGACTTGTGACCGCAGCCGTCGTGCTGCATGCGGCCATGGCGCCGGCCGCGTTCGCGCAATCGGTGCT CACGCGCGACAACGGAGCGCCGGTCGGCGACAACCAGAACTCGCAGACGGCGGGCCCGAACGGCCCCAGCCTGCTGCAGG ACGTGCAGCTCATCCAGAAGCTGCAGCGCTTCGACCGCGAGCGCATCCCCGAGCGCGTGGTGCATGCGCGCGGCACGGGC GTGAAGGGCGAGTTCACCGCGTCCGAGGACATCTCCGCGCTGACCAAGGCCAAGCTCTTCCGCCCCGGCGAGCGCACCCC CGTGTTCGTGCGCTTCTCGTCCGTGGTGCACGGCAACCATTCGCCCGAGACGCTGCGCGACCCGCGCGGCTTCGCCACCA AGTTCTACACGTCCGAAGGCAACTGGGATCTGGTGGGCAACAACTTCCCCACCTTCTTCATCCGCGACGCGATCAAGTTC CCCGACATGGTGCACGCGTTCAAGCCCGATCCGCGCAGCAACCTCGACGACGACTCGCGCCGCTTCGACTTCTTCTCGCA CGTGCCCGAGGCCACGCGCACGCTCACGCTGCTCTATTCGAACGAAGGCACGCCCGCGGGCTACCGCTTCATGGACGGCA ACAGCGTGCATGCCTACAAGTTCGTGAACGCCCAGGGCCAGGTGCACTACGTCAAGTTCCACTGGAAGAGCCTGCAGGGC CTGAAGAACCTCGATCCGAAACAGGTCGAGCAGGTCCAGGGCAAGGACTACAGCCACATGACGAACGACCTGGTGAACGC CATCCGCCAGGGCGACTTTCCCAAGTGGGACCTGTACATCCAGGTGCTCAAGCCTGAAGACCTCGGCAAGTTCGACTTCG ACCCGCTGGACGCCACCAAGATCTGGCCCGGCATTCCCGAGCGCAAGATCGGCCAGATGGTCCTGAACAAGAACGTGGAC AACTTCTTCCAGGAGACCGAACAGGTGGCGATGGCGCCGGCCAACATCGTGCCCGGCATCGAGCCCTCGGAAGACCGCCT GCTGCAGGGCCGCGTGTTCTCGTATTCGGACACGCAGCTCTATCGCGTCGGCACCAACGGCCTGTCCCTGCCCGTGAACC GGCCCCGCGTCGCGGTGAACAACGGCAACCAGGACGGCACCCTGAACACCGGCCACACCACCAGCGGCGTGAACTACGAG CCCAGCCGCCTGGAGCCGCGCCCGCAGGACCCCACCGCGCGCTACAGCCAGCTCCCGCTCACGGGCACGACCCAGCAGGC GAAGATCTCGAAGGAGCAGAACTTCAAGCAGGCCGGCGACCTGTACCGCAGCTACGGCAAGAAGGAGCAGCAGGACCTGA TCCAGAGCTTCGGCGAATCCCTCGCGGGCGCCGATGCCGAGAGCAAGCACATCATCCTGTCGTTCCTCTACAAGGCCGAT CCCGAATACGGCACGGGCGTGGCCCGCGTGGCCAAGGGCGACCTGGCGCGCGTGAAGCAGCTCGCCGCCGCGCTGAAGGA CTGA
Upstream 100 bases:
>100_bases AAATTTGATGGGCGCCATAGCTTCGGCCCTCTTGCTGCCGAGCTGCCCGCCCCCCGATGATTCGCTCCGTTTTTACCCAA CCACGGAGTGGAGTCGTCCC
Downstream 100 bases:
>100_bases TACCGCGGCGTTCCACGAAGCCGGCCGCACGCCACCCTGGTGGCGGCCGGCCCCTTGCGAAGGAGGATTCCATGCGCAGC CTCTGCGTTCCGGCCTGGTG
Product: catalase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 507; Mature: 507
Protein sequence:
>507_residues MKFQRLVTAAVVLHAAMAPAAFAQSVLTRDNGAPVGDNQNSQTAGPNGPSLLQDVQLIQKLQRFDRERIPERVVHARGTG VKGEFTASEDISALTKAKLFRPGERTPVFVRFSSVVHGNHSPETLRDPRGFATKFYTSEGNWDLVGNNFPTFFIRDAIKF PDMVHAFKPDPRSNLDDDSRRFDFFSHVPEATRTLTLLYSNEGTPAGYRFMDGNSVHAYKFVNAQGQVHYVKFHWKSLQG LKNLDPKQVEQVQGKDYSHMTNDLVNAIRQGDFPKWDLYIQVLKPEDLGKFDFDPLDATKIWPGIPERKIGQMVLNKNVD NFFQETEQVAMAPANIVPGIEPSEDRLLQGRVFSYSDTQLYRVGTNGLSLPVNRPRVAVNNGNQDGTLNTGHTTSGVNYE PSRLEPRPQDPTARYSQLPLTGTTQQAKISKEQNFKQAGDLYRSYGKKEQQDLIQSFGESLAGADAESKHIILSFLYKAD PEYGTGVARVAKGDLARVKQLAAALKD
Sequences:
>Translated_507_residues MKFQRLVTAAVVLHAAMAPAAFAQSVLTRDNGAPVGDNQNSQTAGPNGPSLLQDVQLIQKLQRFDRERIPERVVHARGTG VKGEFTASEDISALTKAKLFRPGERTPVFVRFSSVVHGNHSPETLRDPRGFATKFYTSEGNWDLVGNNFPTFFIRDAIKF PDMVHAFKPDPRSNLDDDSRRFDFFSHVPEATRTLTLLYSNEGTPAGYRFMDGNSVHAYKFVNAQGQVHYVKFHWKSLQG LKNLDPKQVEQVQGKDYSHMTNDLVNAIRQGDFPKWDLYIQVLKPEDLGKFDFDPLDATKIWPGIPERKIGQMVLNKNVD NFFQETEQVAMAPANIVPGIEPSEDRLLQGRVFSYSDTQLYRVGTNGLSLPVNRPRVAVNNGNQDGTLNTGHTTSGVNYE PSRLEPRPQDPTARYSQLPLTGTTQQAKISKEQNFKQAGDLYRSYGKKEQQDLIQSFGESLAGADAESKHIILSFLYKAD PEYGTGVARVAKGDLARVKQLAAALKD >Mature_507_residues MKFQRLVTAAVVLHAAMAPAAFAQSVLTRDNGAPVGDNQNSQTAGPNGPSLLQDVQLIQKLQRFDRERIPERVVHARGTG VKGEFTASEDISALTKAKLFRPGERTPVFVRFSSVVHGNHSPETLRDPRGFATKFYTSEGNWDLVGNNFPTFFIRDAIKF PDMVHAFKPDPRSNLDDDSRRFDFFSHVPEATRTLTLLYSNEGTPAGYRFMDGNSVHAYKFVNAQGQVHYVKFHWKSLQG LKNLDPKQVEQVQGKDYSHMTNDLVNAIRQGDFPKWDLYIQVLKPEDLGKFDFDPLDATKIWPGIPERKIGQMVLNKNVD NFFQETEQVAMAPANIVPGIEPSEDRLLQGRVFSYSDTQLYRVGTNGLSLPVNRPRVAVNNGNQDGTLNTGHTTSGVNYE PSRLEPRPQDPTARYSQLPLTGTTQQAKISKEQNFKQAGDLYRSYGKKEQQDLIQSFGESLAGADAESKHIILSFLYKAD PEYGTGVARVAKGDLARVKQLAAALKD
Specific function: Decomposes hydrogen peroxide into water and oxygen; serves to protect cells from the toxic effects of hydrogen peroxide [H]
COG id: COG0753
COG function: function code P; Catalase
Gene ontology:
Cell location: Periplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the catalase family [H]
Homologues:
Organism=Homo sapiens, GI4557014, Length=477, Percent_Identity=41.5094339622642, Blast_Score=369, Evalue=1e-102, Organism=Escherichia coli, GI48994891, Length=387, Percent_Identity=45.7364341085271, Blast_Score=339, Evalue=2e-94, Organism=Caenorhabditis elegans, GI25147792, Length=467, Percent_Identity=42.1841541755889, Blast_Score=392, Evalue=1e-109, Organism=Caenorhabditis elegans, GI25151141, Length=467, Percent_Identity=41.9700214132762, Blast_Score=390, Evalue=1e-109, Organism=Caenorhabditis elegans, GI71998444, Length=469, Percent_Identity=42.4307036247335, Blast_Score=381, Evalue=1e-106, Organism=Saccharomyces cerevisiae, GI6320462, Length=497, Percent_Identity=37.625754527163, Blast_Score=314, Evalue=2e-86, Organism=Saccharomyces cerevisiae, GI6321525, Length=380, Percent_Identity=41.3157894736842, Blast_Score=294, Evalue=3e-80, Organism=Drosophila melanogaster, GI17981717, Length=450, Percent_Identity=44.4444444444444, Blast_Score=381, Evalue=1e-106, Organism=Drosophila melanogaster, GI19920968, Length=454, Percent_Identity=40.9691629955947, Blast_Score=359, Evalue=2e-99,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002226 - InterPro: IPR020835 - InterPro: IPR010582 - InterPro: IPR018028 - InterPro: IPR011614 [H]
Pfam domain/function: PF00199 Catalase; PF06628 Catalase-rel [H]
EC number: =1.11.1.6 [H]
Molecular weight: Translated: 56603; Mature: 56603
Theoretical pI: Translated: 9.16; Mature: 9.16
Prosite motif: PS00437 CATALASE_1 ; PS00438 CATALASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFQRLVTAAVVLHAAMAPAAFAQSVLTRDNGAPVGDNQNSQTAGPNGPSLLQDVQLIQK CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH LQRFDRERIPERVVHARGTGVKGEFTASEDISALTKAKLFRPGERTPVFVRFSSVVHGNH HHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCC SPETLRDPRGFATKFYTSEGNWDLVGNNFPTFFIRDAIKFPDMVHAFKPDPRSNLDDDSR CCHHHCCCCCCEEEEEECCCCEEEECCCCCCHHHHHHHCCCHHHHHCCCCCCCCCCCHHH RFDFFSHVPEATRTLTLLYSNEGTPAGYRFMDGNSVHAYKFVNAQGQVHYVKFHWKSLQG HHHHHHHCCCCCEEEEEEECCCCCCCCEEEECCCCEEEEEEECCCCCEEEEEEEEHHHHH LKNLDPKQVEQVQGKDYSHMTNDLVNAIRQGDFPKWDLYIQVLKPEDLGKFDFDPLDATK HCCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCHH IWPGIPERKIGQMVLNKNVDNFFQETEQVAMAPANIVPGIEPSEDRLLQGRVFSYSDTQL CCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCHHCCCCCCCCHHHEEECEEEEECCCEE YRVGTNGLSLPVNRPRVAVNNGNQDGTLNTGHTTSGVNYEPSRLEPRPQDPTARYSQLPL EEECCCCEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCC TGTTQQAKISKEQNFKQAGDLYRSYGKKEQQDLIQSFGESLAGADAESKHIILSFLYKAD CCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHCC PEYGTGVARVAKGDLARVKQLAAALKD CCCCCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKFQRLVTAAVVLHAAMAPAAFAQSVLTRDNGAPVGDNQNSQTAGPNGPSLLQDVQLIQK CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH LQRFDRERIPERVVHARGTGVKGEFTASEDISALTKAKLFRPGERTPVFVRFSSVVHGNH HHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCC SPETLRDPRGFATKFYTSEGNWDLVGNNFPTFFIRDAIKFPDMVHAFKPDPRSNLDDDSR CCHHHCCCCCCEEEEEECCCCEEEECCCCCCHHHHHHHCCCHHHHHCCCCCCCCCCCHHH RFDFFSHVPEATRTLTLLYSNEGTPAGYRFMDGNSVHAYKFVNAQGQVHYVKFHWKSLQG HHHHHHHCCCCCEEEEEEECCCCCCCCEEEECCCCEEEEEEECCCCCEEEEEEEEHHHHH LKNLDPKQVEQVQGKDYSHMTNDLVNAIRQGDFPKWDLYIQVLKPEDLGKFDFDPLDATK HCCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCHH IWPGIPERKIGQMVLNKNVDNFFQETEQVAMAPANIVPGIEPSEDRLLQGRVFSYSDTQL CCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCHHCCCCCCCCHHHEEECEEEEECCCEE YRVGTNGLSLPVNRPRVAVNNGNQDGTLNTGHTTSGVNYEPSRLEPRPQDPTARYSQLPL EEECCCCEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCC TGTTQQAKISKEQNFKQAGDLYRSYGKKEQQDLIQSFGESLAGADAESKHIILSFLYKAD CCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHCC PEYGTGVARVAKGDLARVKQLAAALKD CCCCCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7546603 [H]