Definition Acidovorax citrulli AAC00-1 chromosome, complete genome.
Accession NC_008752
Length 5,352,772

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The map label for this gene is katB [H]

Identifier: 120611797

GI number: 120611797

Start: 3461461

End: 3462984

Strand: Reverse

Name: katB [H]

Synonym: Aave_3137

Alternate gene names: 120611797

Gene position: 3462984-3461461 (Counterclockwise)

Preceding gene: 120611798

Following gene: 120611796

Centisome position: 64.7

GC content: 65.75

Gene sequence:

>1524_bases
ATGAAATTCCAGAGACTTGTGACCGCAGCCGTCGTGCTGCATGCGGCCATGGCGCCGGCCGCGTTCGCGCAATCGGTGCT
CACGCGCGACAACGGAGCGCCGGTCGGCGACAACCAGAACTCGCAGACGGCGGGCCCGAACGGCCCCAGCCTGCTGCAGG
ACGTGCAGCTCATCCAGAAGCTGCAGCGCTTCGACCGCGAGCGCATCCCCGAGCGCGTGGTGCATGCGCGCGGCACGGGC
GTGAAGGGCGAGTTCACCGCGTCCGAGGACATCTCCGCGCTGACCAAGGCCAAGCTCTTCCGCCCCGGCGAGCGCACCCC
CGTGTTCGTGCGCTTCTCGTCCGTGGTGCACGGCAACCATTCGCCCGAGACGCTGCGCGACCCGCGCGGCTTCGCCACCA
AGTTCTACACGTCCGAAGGCAACTGGGATCTGGTGGGCAACAACTTCCCCACCTTCTTCATCCGCGACGCGATCAAGTTC
CCCGACATGGTGCACGCGTTCAAGCCCGATCCGCGCAGCAACCTCGACGACGACTCGCGCCGCTTCGACTTCTTCTCGCA
CGTGCCCGAGGCCACGCGCACGCTCACGCTGCTCTATTCGAACGAAGGCACGCCCGCGGGCTACCGCTTCATGGACGGCA
ACAGCGTGCATGCCTACAAGTTCGTGAACGCCCAGGGCCAGGTGCACTACGTCAAGTTCCACTGGAAGAGCCTGCAGGGC
CTGAAGAACCTCGATCCGAAACAGGTCGAGCAGGTCCAGGGCAAGGACTACAGCCACATGACGAACGACCTGGTGAACGC
CATCCGCCAGGGCGACTTTCCCAAGTGGGACCTGTACATCCAGGTGCTCAAGCCTGAAGACCTCGGCAAGTTCGACTTCG
ACCCGCTGGACGCCACCAAGATCTGGCCCGGCATTCCCGAGCGCAAGATCGGCCAGATGGTCCTGAACAAGAACGTGGAC
AACTTCTTCCAGGAGACCGAACAGGTGGCGATGGCGCCGGCCAACATCGTGCCCGGCATCGAGCCCTCGGAAGACCGCCT
GCTGCAGGGCCGCGTGTTCTCGTATTCGGACACGCAGCTCTATCGCGTCGGCACCAACGGCCTGTCCCTGCCCGTGAACC
GGCCCCGCGTCGCGGTGAACAACGGCAACCAGGACGGCACCCTGAACACCGGCCACACCACCAGCGGCGTGAACTACGAG
CCCAGCCGCCTGGAGCCGCGCCCGCAGGACCCCACCGCGCGCTACAGCCAGCTCCCGCTCACGGGCACGACCCAGCAGGC
GAAGATCTCGAAGGAGCAGAACTTCAAGCAGGCCGGCGACCTGTACCGCAGCTACGGCAAGAAGGAGCAGCAGGACCTGA
TCCAGAGCTTCGGCGAATCCCTCGCGGGCGCCGATGCCGAGAGCAAGCACATCATCCTGTCGTTCCTCTACAAGGCCGAT
CCCGAATACGGCACGGGCGTGGCCCGCGTGGCCAAGGGCGACCTGGCGCGCGTGAAGCAGCTCGCCGCCGCGCTGAAGGA
CTGA

Upstream 100 bases:

>100_bases
AAATTTGATGGGCGCCATAGCTTCGGCCCTCTTGCTGCCGAGCTGCCCGCCCCCCGATGATTCGCTCCGTTTTTACCCAA
CCACGGAGTGGAGTCGTCCC

Downstream 100 bases:

>100_bases
TACCGCGGCGTTCCACGAAGCCGGCCGCACGCCACCCTGGTGGCGGCCGGCCCCTTGCGAAGGAGGATTCCATGCGCAGC
CTCTGCGTTCCGGCCTGGTG

Product: catalase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 507; Mature: 507

Protein sequence:

>507_residues
MKFQRLVTAAVVLHAAMAPAAFAQSVLTRDNGAPVGDNQNSQTAGPNGPSLLQDVQLIQKLQRFDRERIPERVVHARGTG
VKGEFTASEDISALTKAKLFRPGERTPVFVRFSSVVHGNHSPETLRDPRGFATKFYTSEGNWDLVGNNFPTFFIRDAIKF
PDMVHAFKPDPRSNLDDDSRRFDFFSHVPEATRTLTLLYSNEGTPAGYRFMDGNSVHAYKFVNAQGQVHYVKFHWKSLQG
LKNLDPKQVEQVQGKDYSHMTNDLVNAIRQGDFPKWDLYIQVLKPEDLGKFDFDPLDATKIWPGIPERKIGQMVLNKNVD
NFFQETEQVAMAPANIVPGIEPSEDRLLQGRVFSYSDTQLYRVGTNGLSLPVNRPRVAVNNGNQDGTLNTGHTTSGVNYE
PSRLEPRPQDPTARYSQLPLTGTTQQAKISKEQNFKQAGDLYRSYGKKEQQDLIQSFGESLAGADAESKHIILSFLYKAD
PEYGTGVARVAKGDLARVKQLAAALKD

Sequences:

>Translated_507_residues
MKFQRLVTAAVVLHAAMAPAAFAQSVLTRDNGAPVGDNQNSQTAGPNGPSLLQDVQLIQKLQRFDRERIPERVVHARGTG
VKGEFTASEDISALTKAKLFRPGERTPVFVRFSSVVHGNHSPETLRDPRGFATKFYTSEGNWDLVGNNFPTFFIRDAIKF
PDMVHAFKPDPRSNLDDDSRRFDFFSHVPEATRTLTLLYSNEGTPAGYRFMDGNSVHAYKFVNAQGQVHYVKFHWKSLQG
LKNLDPKQVEQVQGKDYSHMTNDLVNAIRQGDFPKWDLYIQVLKPEDLGKFDFDPLDATKIWPGIPERKIGQMVLNKNVD
NFFQETEQVAMAPANIVPGIEPSEDRLLQGRVFSYSDTQLYRVGTNGLSLPVNRPRVAVNNGNQDGTLNTGHTTSGVNYE
PSRLEPRPQDPTARYSQLPLTGTTQQAKISKEQNFKQAGDLYRSYGKKEQQDLIQSFGESLAGADAESKHIILSFLYKAD
PEYGTGVARVAKGDLARVKQLAAALKD
>Mature_507_residues
MKFQRLVTAAVVLHAAMAPAAFAQSVLTRDNGAPVGDNQNSQTAGPNGPSLLQDVQLIQKLQRFDRERIPERVVHARGTG
VKGEFTASEDISALTKAKLFRPGERTPVFVRFSSVVHGNHSPETLRDPRGFATKFYTSEGNWDLVGNNFPTFFIRDAIKF
PDMVHAFKPDPRSNLDDDSRRFDFFSHVPEATRTLTLLYSNEGTPAGYRFMDGNSVHAYKFVNAQGQVHYVKFHWKSLQG
LKNLDPKQVEQVQGKDYSHMTNDLVNAIRQGDFPKWDLYIQVLKPEDLGKFDFDPLDATKIWPGIPERKIGQMVLNKNVD
NFFQETEQVAMAPANIVPGIEPSEDRLLQGRVFSYSDTQLYRVGTNGLSLPVNRPRVAVNNGNQDGTLNTGHTTSGVNYE
PSRLEPRPQDPTARYSQLPLTGTTQQAKISKEQNFKQAGDLYRSYGKKEQQDLIQSFGESLAGADAESKHIILSFLYKAD
PEYGTGVARVAKGDLARVKQLAAALKD

Specific function: Decomposes hydrogen peroxide into water and oxygen; serves to protect cells from the toxic effects of hydrogen peroxide [H]

COG id: COG0753

COG function: function code P; Catalase

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the catalase family [H]

Homologues:

Organism=Homo sapiens, GI4557014, Length=477, Percent_Identity=41.5094339622642, Blast_Score=369, Evalue=1e-102,
Organism=Escherichia coli, GI48994891, Length=387, Percent_Identity=45.7364341085271, Blast_Score=339, Evalue=2e-94,
Organism=Caenorhabditis elegans, GI25147792, Length=467, Percent_Identity=42.1841541755889, Blast_Score=392, Evalue=1e-109,
Organism=Caenorhabditis elegans, GI25151141, Length=467, Percent_Identity=41.9700214132762, Blast_Score=390, Evalue=1e-109,
Organism=Caenorhabditis elegans, GI71998444, Length=469, Percent_Identity=42.4307036247335, Blast_Score=381, Evalue=1e-106,
Organism=Saccharomyces cerevisiae, GI6320462, Length=497, Percent_Identity=37.625754527163, Blast_Score=314, Evalue=2e-86,
Organism=Saccharomyces cerevisiae, GI6321525, Length=380, Percent_Identity=41.3157894736842, Blast_Score=294, Evalue=3e-80,
Organism=Drosophila melanogaster, GI17981717, Length=450, Percent_Identity=44.4444444444444, Blast_Score=381, Evalue=1e-106,
Organism=Drosophila melanogaster, GI19920968, Length=454, Percent_Identity=40.9691629955947, Blast_Score=359, Evalue=2e-99,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002226
- InterPro:   IPR020835
- InterPro:   IPR010582
- InterPro:   IPR018028
- InterPro:   IPR011614 [H]

Pfam domain/function: PF00199 Catalase; PF06628 Catalase-rel [H]

EC number: =1.11.1.6 [H]

Molecular weight: Translated: 56603; Mature: 56603

Theoretical pI: Translated: 9.16; Mature: 9.16

Prosite motif: PS00437 CATALASE_1 ; PS00438 CATALASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFQRLVTAAVVLHAAMAPAAFAQSVLTRDNGAPVGDNQNSQTAGPNGPSLLQDVQLIQK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
LQRFDRERIPERVVHARGTGVKGEFTASEDISALTKAKLFRPGERTPVFVRFSSVVHGNH
HHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCC
SPETLRDPRGFATKFYTSEGNWDLVGNNFPTFFIRDAIKFPDMVHAFKPDPRSNLDDDSR
CCHHHCCCCCCEEEEEECCCCEEEECCCCCCHHHHHHHCCCHHHHHCCCCCCCCCCCHHH
RFDFFSHVPEATRTLTLLYSNEGTPAGYRFMDGNSVHAYKFVNAQGQVHYVKFHWKSLQG
HHHHHHHCCCCCEEEEEEECCCCCCCCEEEECCCCEEEEEEECCCCCEEEEEEEEHHHHH
LKNLDPKQVEQVQGKDYSHMTNDLVNAIRQGDFPKWDLYIQVLKPEDLGKFDFDPLDATK
HCCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCHH
IWPGIPERKIGQMVLNKNVDNFFQETEQVAMAPANIVPGIEPSEDRLLQGRVFSYSDTQL
CCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCHHCCCCCCCCHHHEEECEEEEECCCEE
YRVGTNGLSLPVNRPRVAVNNGNQDGTLNTGHTTSGVNYEPSRLEPRPQDPTARYSQLPL
EEECCCCEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCC
TGTTQQAKISKEQNFKQAGDLYRSYGKKEQQDLIQSFGESLAGADAESKHIILSFLYKAD
CCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHCC
PEYGTGVARVAKGDLARVKQLAAALKD
CCCCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKFQRLVTAAVVLHAAMAPAAFAQSVLTRDNGAPVGDNQNSQTAGPNGPSLLQDVQLIQK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
LQRFDRERIPERVVHARGTGVKGEFTASEDISALTKAKLFRPGERTPVFVRFSSVVHGNH
HHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCC
SPETLRDPRGFATKFYTSEGNWDLVGNNFPTFFIRDAIKFPDMVHAFKPDPRSNLDDDSR
CCHHHCCCCCCEEEEEECCCCEEEECCCCCCHHHHHHHCCCHHHHHCCCCCCCCCCCHHH
RFDFFSHVPEATRTLTLLYSNEGTPAGYRFMDGNSVHAYKFVNAQGQVHYVKFHWKSLQG
HHHHHHHCCCCCEEEEEEECCCCCCCCEEEECCCCEEEEEEECCCCCEEEEEEEEHHHHH
LKNLDPKQVEQVQGKDYSHMTNDLVNAIRQGDFPKWDLYIQVLKPEDLGKFDFDPLDATK
HCCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCHH
IWPGIPERKIGQMVLNKNVDNFFQETEQVAMAPANIVPGIEPSEDRLLQGRVFSYSDTQL
CCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCHHCCCCCCCCHHHEEECEEEEECCCEE
YRVGTNGLSLPVNRPRVAVNNGNQDGTLNTGHTTSGVNYEPSRLEPRPQDPTARYSQLPL
EEECCCCEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCC
TGTTQQAKISKEQNFKQAGDLYRSYGKKEQQDLIQSFGESLAGADAESKHIILSFLYKAD
CCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHCC
PEYGTGVARVAKGDLARVKQLAAALKD
CCCCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7546603 [H]