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The map label for this gene is lpsJ [H]

Identifier: 120611786

GI number: 120611786

Start: 3450158

End: 3450799

Strand: Reverse

Name: lpsJ [H]

Synonym: Aave_3126

Alternate gene names: 120611786

Gene position: 3450799-3450158 (Counterclockwise)

Preceding gene: 120611787

Following gene: 120611785

Centisome position: 64.47

GC content: 66.51

Gene sequence:

>642_bases
ATGCCCTGGACCCAAGACCAGATGGCCGCGCGCGCGGCGCAGGAACTGGAAGACGGTTTCTACGTGAACCTCGGCATCGG
CATTCCCACGCTGGTGGCCAACCACACCGGCGACAAGGAAGTGTGGCTGCAGTCCGAGAACGGCATGCTGGGCATCGGCC
CGTTCCCGACCGAGGACGCGGTGGACGCCGACCTCATCAACGCCGGCAAGCAGACCGTGACCACCATTCCCGGGTCGTCC
ATCTTCGGCAGCGACCAGTCGTTCGCCATGATCCGCGGCGGCAAGATCAACCTCTCGATCCTGGGCGCCATGCAGGTCAG
CGAGAAGGGCGACCTGGCCAACTGGATGATCCCGGGCAAGATGGTCAAGGGCATGGGCGGCGCCATGGACCTCGTGGCCG
GCGTCAAGCGCGTGATCGTGCTCATGGAACACGTGGCCCGGAAGAAGGACGGGACCGAGGACCTGAAGATCCTGCCGGCC
TGCACGCTGCCCCTGACGGGCGTGGGCGTCGTCGATCGCATCATCACCGACCTGGCCGTCCTGGACGTGACGCCCGGGGG
TCTGAAGGTCGTGGAACTGGCGCCGGGCGTGGACTTCGATGCACTGCAGGCGAAGACCGGCGTGAAGCTGCTGCCCGCCT
GA

Upstream 100 bases:

>100_bases
GCCGCCAAGGTCGAGGCCCAGGCCGTGATCGCCCAGGCCGCCGTCGCGGCAGACCCCGTGGTGCCCACCGTACCCGCCAA
CAAGAAAGAAGGAGCCTGAG

Downstream 100 bases:

>100_bases
GCGGCATGGCCTGCCCGCCGGGGAGAGGGGGTGGGCCTGGCCTTTGACGCTGCCGTGGGGCCTTCGCAACGGCCCGAGGT
CGGGATCTGTTCCGACAGCC

Product: butyryl-CoA:acetate CoA transferase

Products: NA

Alternate protein names: OXCT B; Succinyl CoA:3-oxoacid CoA-transferase [H]

Number of amino acids: Translated: 213; Mature: 212

Protein sequence:

>213_residues
MPWTQDQMAARAAQELEDGFYVNLGIGIPTLVANHTGDKEVWLQSENGMLGIGPFPTEDAVDADLINAGKQTVTTIPGSS
IFGSDQSFAMIRGGKINLSILGAMQVSEKGDLANWMIPGKMVKGMGGAMDLVAGVKRVIVLMEHVARKKDGTEDLKILPA
CTLPLTGVGVVDRIITDLAVLDVTPGGLKVVELAPGVDFDALQAKTGVKLLPA

Sequences:

>Translated_213_residues
MPWTQDQMAARAAQELEDGFYVNLGIGIPTLVANHTGDKEVWLQSENGMLGIGPFPTEDAVDADLINAGKQTVTTIPGSS
IFGSDQSFAMIRGGKINLSILGAMQVSEKGDLANWMIPGKMVKGMGGAMDLVAGVKRVIVLMEHVARKKDGTEDLKILPA
CTLPLTGVGVVDRIITDLAVLDVTPGGLKVVELAPGVDFDALQAKTGVKLLPA
>Mature_212_residues
PWTQDQMAARAAQELEDGFYVNLGIGIPTLVANHTGDKEVWLQSENGMLGIGPFPTEDAVDADLINAGKQTVTTIPGSSI
FGSDQSFAMIRGGKINLSILGAMQVSEKGDLANWMIPGKMVKGMGGAMDLVAGVKRVIVLMEHVARKKDGTEDLKILPAC
TLPLTGVGVVDRIITDLAVLDVTPGGLKVVELAPGVDFDALQAKTGVKLLPA

Specific function: SHORT-CHAIN FATTY ACIDS METABOLISM. [C]

COG id: COG2057

COG function: function code I; Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 3-oxoacid CoA-transferase subunit B family [H]

Homologues:

Organism=Homo sapiens, GI4557817, Length=217, Percent_Identity=56.6820276497696, Blast_Score=229, Evalue=2e-60,
Organism=Homo sapiens, GI11545841, Length=209, Percent_Identity=59.3301435406699, Blast_Score=224, Evalue=3e-59,
Organism=Escherichia coli, GI1788552, Length=207, Percent_Identity=49.2753623188406, Blast_Score=190, Evalue=6e-50,
Organism=Caenorhabditis elegans, GI17531517, Length=210, Percent_Identity=55.7142857142857, Blast_Score=218, Evalue=2e-57,
Organism=Drosophila melanogaster, GI21358325, Length=209, Percent_Identity=59.3301435406699, Blast_Score=232, Evalue=1e-61,
Organism=Drosophila melanogaster, GI24655794, Length=209, Percent_Identity=59.3301435406699, Blast_Score=232, Evalue=2e-61,

Paralogues:

None

Copy number: 369 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012791
- InterPro:   IPR004165
- InterPro:   IPR004164 [H]

Pfam domain/function: PF01144 CoA_trans [H]

EC number: =2.8.3.5 [H]

Molecular weight: Translated: 22378; Mature: 22247

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPWTQDQMAARAAQELEDGFYVNLGIGIPTLVANHTGDKEVWLQSENGMLGIGPFPTEDA
CCCCHHHHHHHHHHHHCCCEEEEECCCCCCEEECCCCCCEEEEECCCCEEEECCCCCCCC
VDADLINAGKQTVTTIPGSSIFGSDQSFAMIRGGKINLSILGAMQVSEKGDLANWMIPGK
CCHHHHHCCCCEEEECCCCCCCCCCCCEEEEECCEEEEEEEEEEEECCCCCCCEEECCHH
MVKGMGGAMDLVAGVKRVIVLMEHVARKKDGTEDLKILPACTLPLTGVGVVDRIITDLAV
HHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHH
LDVTPGGLKVVELAPGVDFDALQAKTGVKLLPA
EEECCCCEEEEEECCCCCHHHHHHCCCEEECCC
>Mature Secondary Structure 
PWTQDQMAARAAQELEDGFYVNLGIGIPTLVANHTGDKEVWLQSENGMLGIGPFPTEDA
CCCHHHHHHHHHHHHCCCEEEEECCCCCCEEECCCCCCEEEEECCCCEEEECCCCCCCC
VDADLINAGKQTVTTIPGSSIFGSDQSFAMIRGGKINLSILGAMQVSEKGDLANWMIPGK
CCHHHHHCCCCEEEECCCCCCCCCCCCEEEEECCEEEEEEEEEEEECCCCCCCEEECCHH
MVKGMGGAMDLVAGVKRVIVLMEHVARKKDGTEDLKILPACTLPLTGVGVVDRIITDLAV
HHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHH
LDVTPGGLKVVELAPGVDFDALQAKTGVKLLPA
EEECCCCEEEEEECCCCCHHHHHHCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9385134 [H]