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The map label for this gene is ssuD

Identifier: 120611707

GI number: 120611707

Start: 3352945

End: 3354120

Strand: Reverse

Name: ssuD

Synonym: Aave_3044

Alternate gene names: 120611707

Gene position: 3354120-3352945 (Counterclockwise)

Preceding gene: 120611708

Following gene: 120611706

Centisome position: 62.66

GC content: 72.28

Gene sequence:

>1176_bases
ATGCACGTGTTCTGGTTCATTCCCACCCACGGCGACAGCCGCTACCTCGGGACGTCCGAGGGTGCCCGCGCCGTCCACTA
CGACTACCTGCGCCAGGTGGCCACGGCCGCCGATACCCTGGGCTACGAAGGGGTGCTGATCCCCACGGGCCGCTCCTGCG
AGGACCCCTGGGTGGTCGCCTCGGCACTCGCGCCCGTGACACGGCGCCTGAAGTTCCTCGTGGCGGTGCGCCCGGGCCTG
CACCAGCCGGCCCTGGCCGCTCGCATGGCCGCGACCTTCGACCGCCTGTCGGGCGGGCGCCTGCTCATCAACCTCGTGAC
GGGCGGCGACCGCACGGAACTGGAGGGCGACGGTGTCTTCCTGGACCATGCCCAGCGCTATGCACAGTCGGAGGAATTCA
TCCGTATCTGGCGCGAGATCCTGTCGCGCAGCCACGAGGGCGGCACCTTCGACTACGAGGGAGAGCACCTGTCGGTGAAG
GGCGCCAAGCTGCTCTACCCGCCGGTGCAGAAGCCCTATCCGCCGGTGTACTTCGGCGGCTCGTCCGAGGCCGCGCACGA
CCTCGCGGCGGAGCAGGTCGATACCTACCTCACCTGGGGCGAGCCGCCGGCCGCGGTGGCGCAGAAGGTGGCCGACGTGC
GCGCCCGCGCCGCGCAACGGGGCCGGACGGTGCGCTTCGGCATACGGCTGCACGTGATCGTGCGCGAGACCGATGCGGCC
GCATGGGCCGCGGCGGAAGAGCTCATCAGCCGCGTGCAGGACGAGACCGTGGCCCAGGCGCAGGCCGTGTTCTCGCGCAT
GGATTCCGAAGGGCAGCGCCGCATGGCCGCGCTGCACGCCGGGGGCACCCGCCGCTCCCGCGCGGACCTGGAGATCAGCC
CCAACCTCTGGGCCGGCGTGGGCCTGGTGCGCGGCGGCGCGGGCACGGCGCTGGTGGGCGATCCGCAGACCGTGGCCGCG
CGCATGCAGGAGTACGCGGACCTGGGCATCGACACCTTCGTGCTCTCCGGCTATCCGCACCTGGAAGAGGCCTACCGCTT
CGCGGAACTGGTGTTCCCGCTGCTGCCCGCCGAGGTGCGCGAGCGCATCGGCGGCGGCCGCGCGGCGGGGCCCCTGACCG
GGCCTTTCGGCGAAATCGTGGGCAACCAGTACGTGCCGCGCGCGGCGCAGAGCTGA

Upstream 100 bases:

>100_bases
ATGTGCTGCCCGCGGTGCCCCTGCCCGCATCCGGGCCGTGCTTTGCCATTTCCTATTGACTCTGCCCACCTCCGTTCCCC
ACTGATCGAGAAAGCCTCCC

Downstream 100 bases:

>100_bases
GCGGTCCGCGCAACAGGAGATTTCCATGGCCATCCATTCCATCAACCACGTGCAACTGCCGTTTCCCGCGGGCGAGGAGG
GCGCCATGCGCGCCTTCTAC

Product: alkanesulfonate monooxygenase

Products: NA

Alternate protein names: FMNH2-dependent aliphatic sulfonate monooxygenase

Number of amino acids: Translated: 391; Mature: 391

Protein sequence:

>391_residues
MHVFWFIPTHGDSRYLGTSEGARAVHYDYLRQVATAADTLGYEGVLIPTGRSCEDPWVVASALAPVTRRLKFLVAVRPGL
HQPALAARMAATFDRLSGGRLLINLVTGGDRTELEGDGVFLDHAQRYAQSEEFIRIWREILSRSHEGGTFDYEGEHLSVK
GAKLLYPPVQKPYPPVYFGGSSEAAHDLAAEQVDTYLTWGEPPAAVAQKVADVRARAAQRGRTVRFGIRLHVIVRETDAA
AWAAAEELISRVQDETVAQAQAVFSRMDSEGQRRMAALHAGGTRRSRADLEISPNLWAGVGLVRGGAGTALVGDPQTVAA
RMQEYADLGIDTFVLSGYPHLEEAYRFAELVFPLLPAEVRERIGGGRAAGPLTGPFGEIVGNQYVPRAAQS

Sequences:

>Translated_391_residues
MHVFWFIPTHGDSRYLGTSEGARAVHYDYLRQVATAADTLGYEGVLIPTGRSCEDPWVVASALAPVTRRLKFLVAVRPGL
HQPALAARMAATFDRLSGGRLLINLVTGGDRTELEGDGVFLDHAQRYAQSEEFIRIWREILSRSHEGGTFDYEGEHLSVK
GAKLLYPPVQKPYPPVYFGGSSEAAHDLAAEQVDTYLTWGEPPAAVAQKVADVRARAAQRGRTVRFGIRLHVIVRETDAA
AWAAAEELISRVQDETVAQAQAVFSRMDSEGQRRMAALHAGGTRRSRADLEISPNLWAGVGLVRGGAGTALVGDPQTVAA
RMQEYADLGIDTFVLSGYPHLEEAYRFAELVFPLLPAEVRERIGGGRAAGPLTGPFGEIVGNQYVPRAAQS
>Mature_391_residues
MHVFWFIPTHGDSRYLGTSEGARAVHYDYLRQVATAADTLGYEGVLIPTGRSCEDPWVVASALAPVTRRLKFLVAVRPGL
HQPALAARMAATFDRLSGGRLLINLVTGGDRTELEGDGVFLDHAQRYAQSEEFIRIWREILSRSHEGGTFDYEGEHLSVK
GAKLLYPPVQKPYPPVYFGGSSEAAHDLAAEQVDTYLTWGEPPAAVAQKVADVRARAAQRGRTVRFGIRLHVIVRETDAA
AWAAAEELISRVQDETVAQAQAVFSRMDSEGQRRMAALHAGGTRRSRADLEISPNLWAGVGLVRGGAGTALVGDPQTVAA
RMQEYADLGIDTFVLSGYPHLEEAYRFAELVFPLLPAEVRERIGGGRAAGPLTGPFGEIVGNQYVPRAAQS

Specific function: Catalyzes the desulfonation of aliphatic sulfonates

COG id: COG2141

COG function: function code C; Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SsuD family

Homologues:

Organism=Escherichia coli, GI1787166, Length=392, Percent_Identity=64.030612244898, Blast_Score=498, Evalue=1e-142,
Organism=Escherichia coli, GI1787247, Length=270, Percent_Identity=28.1481481481481, Blast_Score=79, Evalue=4e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SSUD_ACIAC (A1TRM3)

Other databases:

- EMBL:   CP000512
- RefSeq:   YP_971385.1
- ProteinModelPortal:   A1TRM3
- SMR:   A1TRM3
- STRING:   A1TRM3
- GeneID:   4667904
- GenomeReviews:   CP000512_GR
- KEGG:   aav:Aave_3044
- NMPDR:   fig|397945.5.peg.2591
- eggNOG:   COG2141
- HOGENOM:   HBG639644
- OMA:   REVRFGI
- PhylomeDB:   A1TRM3
- ProtClustDB:   PRK00719
- BioCyc:   AAVE397945:AAVE_3044-MONOMER
- HAMAP:   MF_01229
- InterPro:   IPR019911
- InterPro:   IPR011251
- InterPro:   IPR016048
- Gene3D:   G3DSA:3.20.20.30
- TIGRFAMs:   TIGR03565

Pfam domain/function: PF00296 Bac_luciferase; SSF51679 Luciferase_like

EC number: =1.14.14.5

Molecular weight: Translated: 42529; Mature: 42529

Theoretical pI: Translated: 6.59; Mature: 6.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHVFWFIPTHGDSRYLGTSEGARAVHYDYLRQVATAADTLGYEGVLIPTGRSCEDPWVVA
CEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCHHHH
SALAPVTRRLKFLVAVRPGLHQPALAARMAATFDRLSGGRLLINLVTGGDRTELEGDGVF
HHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCEECCCCEE
LDHAQRYAQSEEFIRIWREILSRSHEGGTFDYEGEHLSVKGAKLLYPPVQKPYPPVYFGG
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCEEECCCCCCCCCCEEECC
SSEAAHDLAAEQVDTYLTWGEPPAAVAQKVADVRARAAQRGRTVRFGIRLHVIVRETDAA
CCHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEEEECCHH
AWAAAEELISRVQDETVAQAQAVFSRMDSEGQRRMAALHAGGTRRSRADLEISPNLWAGV
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCEEECCCHHHCC
GLVRGGAGTALVGDPQTVAARMQEYADLGIDTFVLSGYPHLEEAYRFAELVFPLLPAEVR
CEEECCCCCEEECCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHCCHHHH
ERIGGGRAAGPLTGPFGEIVGNQYVPRAAQS
HHHCCCCCCCCCCCCHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MHVFWFIPTHGDSRYLGTSEGARAVHYDYLRQVATAADTLGYEGVLIPTGRSCEDPWVVA
CEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCHHHH
SALAPVTRRLKFLVAVRPGLHQPALAARMAATFDRLSGGRLLINLVTGGDRTELEGDGVF
HHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCEECCCCEE
LDHAQRYAQSEEFIRIWREILSRSHEGGTFDYEGEHLSVKGAKLLYPPVQKPYPPVYFGG
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCEEECCCCCCCCCCEEECC
SSEAAHDLAAEQVDTYLTWGEPPAAVAQKVADVRARAAQRGRTVRFGIRLHVIVRETDAA
CCHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEEEECCHH
AWAAAEELISRVQDETVAQAQAVFSRMDSEGQRRMAALHAGGTRRSRADLEISPNLWAGV
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCEEECCCHHHCC
GLVRGGAGTALVGDPQTVAARMQEYADLGIDTFVLSGYPHLEEAYRFAELVFPLLPAEVR
CEEECCCCCEEECCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHCCHHHH
ERIGGGRAAGPLTGPFGEIVGNQYVPRAAQS
HHHCCCCCCCCCCCCHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA