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The map label for this gene is ssuC [H]

Identifier: 120611705

GI number: 120611705

Start: 3351670

End: 3352548

Strand: Reverse

Name: ssuC [H]

Synonym: Aave_3042

Alternate gene names: 120611705

Gene position: 3352548-3351670 (Counterclockwise)

Preceding gene: 120611706

Following gene: 120611704

Centisome position: 62.63

GC content: 69.85

Gene sequence:

>879_bases
ATGACGGGTCCCGCCATCTCCCCCGCGGTGCGCGAACTGCAGGTGTCCGCCGCCACCGAAACACCCGATGCGCCCGCAGC
GGTCCTGCCTGCGCCCATGCGGCAGTGGGCCGCGGCCGTGGGGCAGCGCCTGCTGCCCTGGCTGGTGCCGGTGGCGCTGA
TCGCGGCCTGGCAGGTGGCCTCGGCCCAGGGATGGCTGTCCAGCCGCGTGCTGCCGGCACCGTCCGATGTGCTCAAGGCC
GCCTGGCAGCTCGGCGAATCCGGCGAGCTGTGGACCCACGTGAAGGTGAGCGCGGGCCGCGCGCTGGCGGGCCTGGCGAT
CGGCGGCGGCCTGGGCCTGCTGCTCGGGCTGCTCACCGGCTCGCTGCGCTGGGCGGAAACGCTGCTGGATTCCACCGTGC
AGATGGTGCGCAACATCCCCGCGCTGGCGCTCATCCCGCTGGTGATCCTCTGGTTCGGCATCGACGAATCGGCCAAGGTG
TTCCTGATCGCGGTCTCGGTGTTCTTCCCGATCTACCTCAACACCTTCCACGGCATCCGCAACGTCGATCCGGGCCTGAT
CGAGATGGGCCGCACCTACGGGCTCTCGCGCTGGCAGCTCTACCGCGAGGTGGTCCTGCCCGGAGCGATGTCCTCCATCC
TCGTGGGCCTGCGCTTTTCGCTGGGGCTCATGTGGGTGATCCTGATCGTGGCGGAAACCATCTCCGCGCAGGCCGGCATC
GGCTACCTCACGATGAACGCGCGCGAGTTCCTGCAGACCGACGTGGTGCTCGTGGGCATCCTGCTCTACGCGCTGCTGGG
CAAGCTGGCGGACGTGTTCGCGCGCGGCCTGGAGCACTGGTGGCTGCGGTGGCATCCCGGCTACCAGGCCAAGGCATGA

Upstream 100 bases:

>100_bases
AAAACCGGGCGCTTCCGGGCTATCTGCGCTTCTATGTGAAGGACCCGGCAGGCAACCAGCTCGAGTTCCTGGAGCCCGAC
GCGGAAGCAGGAGCGCTGGC

Downstream 100 bases:

>100_bases
ACGAAGGAGAGACGGCACCATGTCCGCCCCACGCACCGCTTCCTCCCCCGCGCCCGGCCTGCGCCTGCAGGCGCGCCGGC
TGACCAAGCGCTACGGCGCG

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 292; Mature: 291

Protein sequence:

>292_residues
MTGPAISPAVRELQVSAATETPDAPAAVLPAPMRQWAAAVGQRLLPWLVPVALIAAWQVASAQGWLSSRVLPAPSDVLKA
AWQLGESGELWTHVKVSAGRALAGLAIGGGLGLLLGLLTGSLRWAETLLDSTVQMVRNIPALALIPLVILWFGIDESAKV
FLIAVSVFFPIYLNTFHGIRNVDPGLIEMGRTYGLSRWQLYREVVLPGAMSSILVGLRFSLGLMWVILIVAETISAQAGI
GYLTMNAREFLQTDVVLVGILLYALLGKLADVFARGLEHWWLRWHPGYQAKA

Sequences:

>Translated_292_residues
MTGPAISPAVRELQVSAATETPDAPAAVLPAPMRQWAAAVGQRLLPWLVPVALIAAWQVASAQGWLSSRVLPAPSDVLKA
AWQLGESGELWTHVKVSAGRALAGLAIGGGLGLLLGLLTGSLRWAETLLDSTVQMVRNIPALALIPLVILWFGIDESAKV
FLIAVSVFFPIYLNTFHGIRNVDPGLIEMGRTYGLSRWQLYREVVLPGAMSSILVGLRFSLGLMWVILIVAETISAQAGI
GYLTMNAREFLQTDVVLVGILLYALLGKLADVFARGLEHWWLRWHPGYQAKA
>Mature_291_residues
TGPAISPAVRELQVSAATETPDAPAAVLPAPMRQWAAAVGQRLLPWLVPVALIAAWQVASAQGWLSSRVLPAPSDVLKAA
WQLGESGELWTHVKVSAGRALAGLAIGGGLGLLLGLLTGSLRWAETLLDSTVQMVRNIPALALIPLVILWFGIDESAKVF
LIAVSVFFPIYLNTFHGIRNVDPGLIEMGRTYGLSRWQLYREVVLPGAMSSILVGLRFSLGLMWVILIVAETISAQAGIG
YLTMNAREFLQTDVVLVGILLYALLGKLADVFARGLEHWWLRWHPGYQAKA

Specific function: Part of a binding-protein-dependent transport system for aliphatic sulfonates. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0600

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI87081802, Length=263, Percent_Identity=62.3574144486692, Blast_Score=311, Evalue=2e-86,
Organism=Escherichia coli, GI1786564, Length=238, Percent_Identity=35.2941176470588, Blast_Score=126, Evalue=2e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31546; Mature: 31414

Theoretical pI: Translated: 9.38; Mature: 9.38

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGPAISPAVRELQVSAATETPDAPAAVLPAPMRQWAAAVGQRLLPWLVPVALIAAWQVA
CCCCCCCHHHHHHHHHHCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SAQGWLSSRVLPAPSDVLKAAWQLGESGELWTHVKVSAGRALAGLAIGGGLGLLLGLLTG
HHHHHHHCCCCCCCHHHHHHHHHCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHC
SLRWAETLLDSTVQMVRNIPALALIPLVILWFGIDESAKVFLIAVSVFFPIYLNTFHGIR
CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCC
NVDPGLIEMGRTYGLSRWQLYREVVLPGAMSSILVGLRFSLGLMWVILIVAETISAQAGI
CCCCHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GYLTMNAREFLQTDVVLVGILLYALLGKLADVFARGLEHWWLRWHPGYQAKA
CEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCC
>Mature Secondary Structure 
TGPAISPAVRELQVSAATETPDAPAAVLPAPMRQWAAAVGQRLLPWLVPVALIAAWQVA
CCCCCCHHHHHHHHHHCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SAQGWLSSRVLPAPSDVLKAAWQLGESGELWTHVKVSAGRALAGLAIGGGLGLLLGLLTG
HHHHHHHCCCCCCCHHHHHHHHHCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHC
SLRWAETLLDSTVQMVRNIPALALIPLVILWFGIDESAKVFLIAVSVFFPIYLNTFHGIR
CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCC
NVDPGLIEMGRTYGLSRWQLYREVVLPGAMSSILVGLRFSLGLMWVILIVAETISAQAGI
CCCCHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GYLTMNAREFLQTDVVLVGILLYALLGKLADVFARGLEHWWLRWHPGYQAKA
CEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10506196; 8905232; 9278503 [H]