| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120611699
Identifier: 120611699
GI number: 120611699
Start: 3346648
End: 3347793
Strand: Reverse
Name: 120611699
Synonym: Aave_3036
Alternate gene names: NA
Gene position: 3347793-3346648 (Counterclockwise)
Preceding gene: 120611700
Following gene: 120611698
Centisome position: 62.54
GC content: 70.68
Gene sequence:
>1146_bases ATGGCATCCAAAGAGAAGGAAGAAGCGCCGGTGTCCGCCGCCGCGGCCGAGCGCGAGGAAAAAGCCCGGCTCGCCCTGTG CGCGGCGGGTCCGCACGGCGACATGGAGCTGGCGTCCGTCACCATCGACGACTACAGCCTCGAACTGCGCGACGGTGACG GCTTCGCGGGCGACAACGCCAGCCGCACCGCGTTCCGGCACATGCTGGATGCCTGGCGCACCCTCTATGCCGACATGGCC GGCAAGGACCCGCTGGGCGACAAGCCCACGCGCGAAATCAGCAAGCAGCGCCTGGACGAAATGCTGGCCAGGGACGGCGT GGCGGCCCGGGCGATCGAGGCAGCCTCGGAAGACTATGCACAGCAGTTCGCCCACGTGGTCCTGCGCTTCCTGCAGCACA AGACCTGGAAGGGCGTGGAGCGCGTGATCGTGGGCGGAGGCTTCCACCAGAGCGAGGTGGGCGAGCGCGCCATCGCCCGC GCGGCCGACCTCGTCGCGGAGGAGCTCCAGCGCAAGAAGAAGGACCCGGTGGAACTGCGCCTGCTGCACCACCATGCCGA CGAGGGCGGCCTGATCGGCTGGGTGCACCTGGCGCCGCCCGCGCTGCTGCAGAGCTACGACGCGATCCTGGCGGTGGACA TCGGCGGCACCAACGTGCGCTGCGGCATCGTGCAGACCCACCTGCATTCCGCGCCCGACATGTCCAGGGCCGAGGTGCTG CGCCGCGAGAAATGGGGCCATGCGGACGATGCCCCGCGCCGCGACGAGCTCGTGGACGGCATCGCCGGCATCCTGGAGGG TCTGGTCGAGCATGCCCGGAAGAAGGAGCTGAGCCTCGCGCCTTTCGTGGGCGTCGCCTGCCCGGGCCTGGTCTGCGAAG ACGGCTCGCTCGCCGGCGGCACGCAGAACCTGCCGGGCAACTGGGAGAGCATCCGCTTCCACCTGCCGCGCGACCTGTGC GAGCGCCTGCCGGCCATCAACGGCGGCCGCACCCAGGTCTGCCTGCACAACGACGCCGTGGTGCAGGGGCTCTCGGAACT GCCCTTCACCCAGGACGTGGAGCGCTGGGCCGTGCTCACCGTGGGCACGGGCCTGGGCAACGCGAGCTACACCAACCGCA CCCCGCACCAGCGCGCCCGGCGGTGA
Upstream 100 bases:
>100_bases CGTGGTTTGGCGGCGTTGGCTGACGCGGCCGCGCCGTCCGGCGGGGCACCATCGGGCCAGGGCCTGCGACGCGGGCCCAT CCCTCCCTACGAATACGACC
Downstream 100 bases:
>100_bases GCGGCCCCGCGCGGGGCAGGGCCGGCCCCGCGGCGCGGCGAACGGCAGGCCCGGCTCGATAGAATCGGGGGTTACGCTTC ACAACAATCCCCGCGGCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: ATPase AAA-2 Domain-Containing Protein
Number of amino acids: Translated: 381; Mature: 380
Protein sequence:
>381_residues MASKEKEEAPVSAAAAEREEKARLALCAAGPHGDMELASVTIDDYSLELRDGDGFAGDNASRTAFRHMLDAWRTLYADMA GKDPLGDKPTREISKQRLDEMLARDGVAARAIEAASEDYAQQFAHVVLRFLQHKTWKGVERVIVGGGFHQSEVGERAIAR AADLVAEELQRKKKDPVELRLLHHHADEGGLIGWVHLAPPALLQSYDAILAVDIGGTNVRCGIVQTHLHSAPDMSRAEVL RREKWGHADDAPRRDELVDGIAGILEGLVEHARKKELSLAPFVGVACPGLVCEDGSLAGGTQNLPGNWESIRFHLPRDLC ERLPAINGGRTQVCLHNDAVVQGLSELPFTQDVERWAVLTVGTGLGNASYTNRTPHQRARR
Sequences:
>Translated_381_residues MASKEKEEAPVSAAAAEREEKARLALCAAGPHGDMELASVTIDDYSLELRDGDGFAGDNASRTAFRHMLDAWRTLYADMA GKDPLGDKPTREISKQRLDEMLARDGVAARAIEAASEDYAQQFAHVVLRFLQHKTWKGVERVIVGGGFHQSEVGERAIAR AADLVAEELQRKKKDPVELRLLHHHADEGGLIGWVHLAPPALLQSYDAILAVDIGGTNVRCGIVQTHLHSAPDMSRAEVL RREKWGHADDAPRRDELVDGIAGILEGLVEHARKKELSLAPFVGVACPGLVCEDGSLAGGTQNLPGNWESIRFHLPRDLC ERLPAINGGRTQVCLHNDAVVQGLSELPFTQDVERWAVLTVGTGLGNASYTNRTPHQRARR >Mature_380_residues ASKEKEEAPVSAAAAEREEKARLALCAAGPHGDMELASVTIDDYSLELRDGDGFAGDNASRTAFRHMLDAWRTLYADMAG KDPLGDKPTREISKQRLDEMLARDGVAARAIEAASEDYAQQFAHVVLRFLQHKTWKGVERVIVGGGFHQSEVGERAIARA ADLVAEELQRKKKDPVELRLLHHHADEGGLIGWVHLAPPALLQSYDAILAVDIGGTNVRCGIVQTHLHSAPDMSRAEVLR REKWGHADDAPRRDELVDGIAGILEGLVEHARKKELSLAPFVGVACPGLVCEDGSLAGGTQNLPGNWESIRFHLPRDLCE RLPAINGGRTQVCLHNDAVVQGLSELPFTQDVERWAVLTVGTGLGNASYTNRTPHQRARR
Specific function: Unknown
COG id: COG1940
COG function: function code KG; Transcriptional regulator/sugar kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41597; Mature: 41466
Theoretical pI: Translated: 6.20; Mature: 6.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASKEKEEAPVSAAAAEREEKARLALCAAGPHGDMELASVTIDDYSLELRDGDGFAGDNA CCCCCCHHCCCHHHHHHHHHHCEEEEEECCCCCCCEEEEEEEECEEEEEECCCCCCCCCH SRTAFRHMLDAWRTLYADMAGKDPLGDKPTREISKQRLDEMLARDGVAARAIEAASEDYA HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH QQFAHVVLRFLQHKTWKGVERVIVGGGFHQSEVGERAIARAADLVAEELQRKKKDPVELR HHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE LLHHHADEGGLIGWVHLAPPALLQSYDAILAVDIGGTNVRCGIVQTHLHSAPDMSRAEVL HHHHCCCCCCEEEEEECCCHHHHHCCCCEEEEEECCCCEEEEHHHHHHCCCCCHHHHHHH RREKWGHADDAPRRDELVDGIAGILEGLVEHARKKELSLAPFVGVACPGLVCEDGSLAGG HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCEECCCCCCCC TQNLPGNWESIRFHLPRDLCERLPAINGGRTQVCLHNDAVVQGLSELPFTQDVERWAVLT CCCCCCCHHHEEEECCHHHHHHCCCCCCCCEEEEECCHHHHHHHHHCCCHHCHHHEEEEE VGTGLGNASYTNRTPHQRARR EECCCCCCCCCCCCCHHHHCC >Mature Secondary Structure ASKEKEEAPVSAAAAEREEKARLALCAAGPHGDMELASVTIDDYSLELRDGDGFAGDNA CCCCCHHCCCHHHHHHHHHHCEEEEEECCCCCCCEEEEEEEECEEEEEECCCCCCCCCH SRTAFRHMLDAWRTLYADMAGKDPLGDKPTREISKQRLDEMLARDGVAARAIEAASEDYA HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH QQFAHVVLRFLQHKTWKGVERVIVGGGFHQSEVGERAIARAADLVAEELQRKKKDPVELR HHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE LLHHHADEGGLIGWVHLAPPALLQSYDAILAVDIGGTNVRCGIVQTHLHSAPDMSRAEVL HHHHCCCCCCEEEEEECCCHHHHHCCCCEEEEEECCCCEEEEHHHHHHCCCCCHHHHHHH RREKWGHADDAPRRDELVDGIAGILEGLVEHARKKELSLAPFVGVACPGLVCEDGSLAGG HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCEECCCCCCCC TQNLPGNWESIRFHLPRDLCERLPAINGGRTQVCLHNDAVVQGLSELPFTQDVERWAVLT CCCCCCCHHHEEEECCHHHHHHCCCCCCCCEEEEECCHHHHHHHHHCCCHHCHHHEEEEE VGTGLGNASYTNRTPHQRARR EECCCCCCCCCCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA