| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is yhhW [C]
Identifier: 120611692
GI number: 120611692
Start: 3337788
End: 3338489
Strand: Reverse
Name: yhhW [C]
Synonym: Aave_3029
Alternate gene names: 120611692
Gene position: 3338489-3337788 (Counterclockwise)
Preceding gene: 120611698
Following gene: 120611691
Centisome position: 62.37
GC content: 71.51
Gene sequence:
>702_bases ATGTTGACCGTCCGCAAATCGTGCGACCGGGGCCATGCCGACCACGGCTGGCTGCGATCGCTCCACAGCTTCTCCTTCGC CGGCTATCGCGACCCCCGGTACATGGGCTTCGGCAACCTGCGCGCCCTGAATGAGGAATGGATCGCTCCCGGCGCCGGCC TGGGGCTGCACGGCGACCGCGACATGGAAATCCTCAGCTACGTGCTGTCCGGCCGGCTGGGCAGCCGCGATTGCAGCGGC CGGGTGCAATGCGCCGCCGCGGGCCACGTGCAGCGCATGGCGGGCGGCGATGGCGCCACCCGCGCTGAATTCAACCCGCA GCCCGACCAGCCCGCGCACTACCTGCAGATCTGGATCGCGCCGCGGGCCCCGGGCATGGCGCGGGAGTACGCGCAGGTTC CGGGCCCCGCGGGCCGCGGGAGCGGAAGGCTGCATCTGCTGGCCGCCCCGGCAGCCGCGCCGGACGTGCTGGGGCTGCAG GCCGATGCCTGCTTCTATGCAGGACTTTTCGACGGCATGGATGTCGCCGAGCTGCCCCTGGACCCTGCCCGCAAATGCTA CGTGCACCTGTTGCGTGGCACGCTGCAGGCCAACGGCAGGACGCTGGCCGCGGGCGACGCCGCCTTCGTGGAAAGCGAGG GCCGACTGGCCCTGGGCCGGGGCAGCGATGCCGAGGTGCTGGTGTTCGACCTCGCCGCATGA
Upstream 100 bases:
>100_bases GGGGAAAAAGCTTCAAAGGTTTTGAATGATGCCTTCAATCGCACTGCGTCCGCAAGTTGCACGCGGCTTCTAAAGTGCCA GCACTGCCTGACACCCGCCC
Downstream 100 bases:
>100_bases AACCCGCCATGCGGCCCGGACGACGCACCGCCGACACGGCATATTCCAACCCATCATTTCCCCACTAGGAGTCATTTCCA TGGCAAAGATCGCAGTCGTC
Product: pirin domain-containing protein
Products: NA
Alternate protein names: Putative quercetinase; Pirin-like protein sll1773 [H]
Number of amino acids: Translated: 233; Mature: 233
Protein sequence:
>233_residues MLTVRKSCDRGHADHGWLRSLHSFSFAGYRDPRYMGFGNLRALNEEWIAPGAGLGLHGDRDMEILSYVLSGRLGSRDCSG RVQCAAAGHVQRMAGGDGATRAEFNPQPDQPAHYLQIWIAPRAPGMAREYAQVPGPAGRGSGRLHLLAAPAAAPDVLGLQ ADACFYAGLFDGMDVAELPLDPARKCYVHLLRGTLQANGRTLAAGDAAFVESEGRLALGRGSDAEVLVFDLAA
Sequences:
>Translated_233_residues MLTVRKSCDRGHADHGWLRSLHSFSFAGYRDPRYMGFGNLRALNEEWIAPGAGLGLHGDRDMEILSYVLSGRLGSRDCSG RVQCAAAGHVQRMAGGDGATRAEFNPQPDQPAHYLQIWIAPRAPGMAREYAQVPGPAGRGSGRLHLLAAPAAAPDVLGLQ ADACFYAGLFDGMDVAELPLDPARKCYVHLLRGTLQANGRTLAAGDAAFVESEGRLALGRGSDAEVLVFDLAA >Mature_233_residues MLTVRKSCDRGHADHGWLRSLHSFSFAGYRDPRYMGFGNLRALNEEWIAPGAGLGLHGDRDMEILSYVLSGRLGSRDCSG RVQCAAAGHVQRMAGGDGATRAEFNPQPDQPAHYLQIWIAPRAPGMAREYAQVPGPAGRGSGRLHLLAAPAAAPDVLGLQ ADACFYAGLFDGMDVAELPLDPARKCYVHLLRGTLQANGRTLAAGDAAFVESEGRLALGRGSDAEVLVFDLAA
Specific function: Putative quercetin 2,3-dioxygenase [H]
COG id: COG1741
COG function: function code R; Pirin-related protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pirin family [H]
Homologues:
Organism=Escherichia coli, GI1789847, Length=233, Percent_Identity=36.9098712446352, Blast_Score=162, Evalue=2e-41, Organism=Escherichia coli, GI1789493, Length=238, Percent_Identity=29.8319327731092, Blast_Score=101, Evalue=4e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011051 - InterPro: IPR012093 - InterPro: IPR003829 - InterPro: IPR014710 [H]
Pfam domain/function: PF02678 Pirin [H]
EC number: =1.13.11.24 [H]
Molecular weight: Translated: 24811; Mature: 24811
Theoretical pI: Translated: 6.94; Mature: 6.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTVRKSCDRGHADHGWLRSLHSFSFAGYRDPRYMGFGNLRALNEEWIAPGAGLGLHGDR CCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCEECCCCCEECCHHHCCCCCCCCCCCCC DMEILSYVLSGRLGSRDCSGRVQCAAAGHVQRMAGGDGATRAEFNPQPDQPAHYLQIWIA HHHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEC PRAPGMAREYAQVPGPAGRGSGRLHLLAAPAAAPDVLGLQADACFYAGLFDGMDVAELPL CCCCCHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCHHHCCC DPARKCYVHLLRGTLQANGRTLAAGDAAFVESEGRLALGRGSDAEVLVFDLAA CHHHHHHHHHHHHHHHCCCEEEECCCEEEEECCCCEEEECCCCCEEEEEEECC >Mature Secondary Structure MLTVRKSCDRGHADHGWLRSLHSFSFAGYRDPRYMGFGNLRALNEEWIAPGAGLGLHGDR CCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCEECCCCCEECCHHHCCCCCCCCCCCCC DMEILSYVLSGRLGSRDCSGRVQCAAAGHVQRMAGGDGATRAEFNPQPDQPAHYLQIWIA HHHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEC PRAPGMAREYAQVPGPAGRGSGRLHLLAAPAAAPDVLGLQADACFYAGLFDGMDVAELPL CCCCCHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCHHHCCC DPARKCYVHLLRGTLQANGRTLAAGDAAFVESEGRLALGRGSDAEVLVFDLAA CHHHHHHHHHHHHHHHCCCEEEECCCEEEEECCCCEEEECCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]