| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
Click here to switch to the map view.
The map label for this gene is yajO [H]
Identifier: 120611679
GI number: 120611679
Start: 3325655
End: 3326632
Strand: Direct
Name: yajO [H]
Synonym: Aave_3016
Alternate gene names: 120611679
Gene position: 3325655-3326632 (Clockwise)
Preceding gene: 120611678
Following gene: 120611683
Centisome position: 62.13
GC content: 67.89
Gene sequence:
>978_bases ATGCAATCACGCCCCCTCGGCCGCTCCGGCCTGCAGGTTTCCCCGCTGTGCTTCGGCGGCAATGTGTTCGGCTGGACGGT GGACGAGCCGACCACGTTCTCGCTGATCGACGCGTGGCTGGACGCGGGCTTCAACTTCATCGACACGGCCGATGTCTATT CGCGCTGGAACCCGGGTCACATGGGGGGCGAATCCGAAGCCCTGATCGGCCAGTGGCTCAAGCGCACCGGCAAGCGGGAC AGGATCGTGCTCGCCACCAAGGTGGGCAAGGACATGGGCGACGGCAGGGTCGGCCTGAAGCCGGACTACATCCGCCGCGC GGTCGAGGATTCGCTGCGCCGCCTGCACACGGACTACATCGACCTCTACCAGTCGCACGACGACGATCCCTCCACGCCGC TCGAGGACACGCTGGGCACCTATGCCGACCTGATCCGCGAAGGCAAGGTGCGCGCCATCGGCGCATCCAACCACACGGCC GCCCGCCTGTCGGAAGCGCTCGCCACCAGCGCGCGGCTGGGCCTGCCGCGCTATGAATCGCTGCAGCCGCTCTACAACCT GTACGACCGCGCGGTGTTCGAAGATGAATTGCAGCCGCTGTGCCTGGAGCAGCAGGTGGGCGTCATCAATTTCTACGCCC TGGCCGCCGGCTTCCTCACAGGCAAGTACCGCAGCGAAGCCGACGCGTCCAAAAGCGCGCGCGGCGCCAAGACGGTGGAG AAATACCTCAATCCGCGCGGCCTGCGCATCCTGGCCGAGCTCGACGAGGTGGCCGAGCGTTACGAGGCCACGCCCGGCCA GGTCGCCATCGCATGGCAGATGGCCCAGCCCGCCATCACCGCGCCGATCGCCAGCGCGACCTCGCTGGAGCAGCTGCAGG ACCTGGTGCGCGCCGCGCACCTGCAGCTCGACGCCGACGCACTGGAAGCGCTGAGCCAGGCCAGCGAGGAATCCCCCGAC GAGGCTCGGCCCCTTTAA
Upstream 100 bases:
>100_bases ATCTGACAGGTTCTTACAACTGCGCGGCCCGGGAGCCGTGCGGCGCCGCAACAATGGTCCGGAAGCCCGCCTTTCCCAAC CAATCCAGGAGACTCCACCC
Downstream 100 bases:
>100_bases CCGGCCAGGACGAAGGGCAGCACCCGCGCCGCCGTGCCGGGCACCAGCAGGTCCGCCACGCCGTCGAGCGCGCTGGGTTC CGGATTGACGATGGCCACGC
Product: aldo/keto reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 325; Mature: 325
Protein sequence:
>325_residues MQSRPLGRSGLQVSPLCFGGNVFGWTVDEPTTFSLIDAWLDAGFNFIDTADVYSRWNPGHMGGESEALIGQWLKRTGKRD RIVLATKVGKDMGDGRVGLKPDYIRRAVEDSLRRLHTDYIDLYQSHDDDPSTPLEDTLGTYADLIREGKVRAIGASNHTA ARLSEALATSARLGLPRYESLQPLYNLYDRAVFEDELQPLCLEQQVGVINFYALAAGFLTGKYRSEADASKSARGAKTVE KYLNPRGLRILAELDEVAERYEATPGQVAIAWQMAQPAITAPIASATSLEQLQDLVRAAHLQLDADALEALSQASEESPD EARPL
Sequences:
>Translated_325_residues MQSRPLGRSGLQVSPLCFGGNVFGWTVDEPTTFSLIDAWLDAGFNFIDTADVYSRWNPGHMGGESEALIGQWLKRTGKRD RIVLATKVGKDMGDGRVGLKPDYIRRAVEDSLRRLHTDYIDLYQSHDDDPSTPLEDTLGTYADLIREGKVRAIGASNHTA ARLSEALATSARLGLPRYESLQPLYNLYDRAVFEDELQPLCLEQQVGVINFYALAAGFLTGKYRSEADASKSARGAKTVE KYLNPRGLRILAELDEVAERYEATPGQVAIAWQMAQPAITAPIASATSLEQLQDLVRAAHLQLDADALEALSQASEESPD EARPL >Mature_325_residues MQSRPLGRSGLQVSPLCFGGNVFGWTVDEPTTFSLIDAWLDAGFNFIDTADVYSRWNPGHMGGESEALIGQWLKRTGKRD RIVLATKVGKDMGDGRVGLKPDYIRRAVEDSLRRLHTDYIDLYQSHDDDPSTPLEDTLGTYADLIREGKVRAIGASNHTA ARLSEALATSARLGLPRYESLQPLYNLYDRAVFEDELQPLCLEQQVGVINFYALAAGFLTGKYRSEADASKSARGAKTVE KYLNPRGLRILAELDEVAERYEATPGQVAIAWQMAQPAITAPIASATSLEQLQDLVRAAHLQLDADALEALSQASEESPD EARPL
Specific function: Unknown
COG id: COG0667
COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldo/keto reductase 2 family [H]
Homologues:
Organism=Homo sapiens, GI27436969, Length=312, Percent_Identity=29.8076923076923, Blast_Score=121, Evalue=1e-27, Organism=Homo sapiens, GI4504825, Length=309, Percent_Identity=29.7734627831715, Blast_Score=120, Evalue=1e-27, Organism=Homo sapiens, GI27436964, Length=305, Percent_Identity=27.8688524590164, Blast_Score=114, Evalue=1e-25, Organism=Homo sapiens, GI27436966, Length=305, Percent_Identity=27.8688524590164, Blast_Score=113, Evalue=2e-25, Organism=Homo sapiens, GI27436962, Length=305, Percent_Identity=27.8688524590164, Blast_Score=113, Evalue=3e-25, Organism=Homo sapiens, GI27436971, Length=330, Percent_Identity=28.7878787878788, Blast_Score=107, Evalue=1e-23, Organism=Homo sapiens, GI223718702, Length=329, Percent_Identity=31.6109422492401, Blast_Score=101, Evalue=9e-22, Organism=Homo sapiens, GI41152114, Length=222, Percent_Identity=36.9369369369369, Blast_Score=95, Evalue=1e-19, Organism=Homo sapiens, GI41327764, Length=201, Percent_Identity=36.318407960199, Blast_Score=83, Evalue=3e-16, Organism=Homo sapiens, GI223718708, Length=149, Percent_Identity=36.241610738255, Blast_Score=83, Evalue=4e-16, Organism=Escherichia coli, GI87081735, Length=333, Percent_Identity=36.036036036036, Blast_Score=185, Evalue=3e-48, Organism=Escherichia coli, GI1789199, Length=344, Percent_Identity=31.3953488372093, Blast_Score=153, Evalue=2e-38, Organism=Escherichia coli, GI1788070, Length=331, Percent_Identity=32.02416918429, Blast_Score=123, Evalue=2e-29, Organism=Escherichia coli, GI1789375, Length=308, Percent_Identity=29.2207792207792, Blast_Score=113, Evalue=2e-26, Organism=Escherichia coli, GI1788081, Length=295, Percent_Identity=29.4915254237288, Blast_Score=87, Evalue=2e-18, Organism=Escherichia coli, GI48994888, Length=294, Percent_Identity=27.891156462585, Blast_Score=65, Evalue=7e-12, Organism=Saccharomyces cerevisiae, GI6325169, Length=337, Percent_Identity=27.299703264095, Blast_Score=109, Evalue=5e-25, Organism=Saccharomyces cerevisiae, GI6323998, Length=322, Percent_Identity=27.0186335403727, Blast_Score=101, Evalue=1e-22, Organism=Saccharomyces cerevisiae, GI6319958, Length=298, Percent_Identity=26.8456375838926, Blast_Score=99, Evalue=7e-22, Organism=Saccharomyces cerevisiae, GI6319951, Length=338, Percent_Identity=23.3727810650888, Blast_Score=84, Evalue=2e-17, Organism=Saccharomyces cerevisiae, GI6321052, Length=163, Percent_Identity=34.3558282208589, Blast_Score=81, Evalue=3e-16, Organism=Saccharomyces cerevisiae, GI6322615, Length=245, Percent_Identity=24.4897959183673, Blast_Score=66, Evalue=9e-12, Organism=Drosophila melanogaster, GI24646155, Length=233, Percent_Identity=32.618025751073, Blast_Score=84, Evalue=1e-16, Organism=Drosophila melanogaster, GI24640980, Length=355, Percent_Identity=24.5070422535211, Blast_Score=78, Evalue=1e-14, Organism=Drosophila melanogaster, GI45549126, Length=350, Percent_Identity=24.2857142857143, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI24646159, Length=182, Percent_Identity=31.3186813186813, Blast_Score=66, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR020471 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 35740; Mature: 35740
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSRPLGRSGLQVSPLCFGGNVFGWTVDEPTTFSLIDAWLDAGFNFIDTADVYSRWNPGH CCCCCCCCCCCEECCEEECCCEEEEECCCCCHHHHHHHHHHCCCCCCCCHHHHHCCCCCC MGGESEALIGQWLKRTGKRDRIVLATKVGKDMGDGRVGLKPDYIRRAVEDSLRRLHTDYI CCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH DLYQSHDDDPSTPLEDTLGTYADLIREGKVRAIGASNHTAARLSEALATSARLGLPRYES HHHHCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCHHH LQPLYNLYDRAVFEDELQPLCLEQQVGVINFYALAAGFLTGKYRSEADASKSARGAKTVE HHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHCCHHCHHHHHHHHCHHHHHH KYLNPRGLRILAELDEVAERYEATPGQVAIAWQMAQPAITAPIASATSLEQLQDLVRAAH HHCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHCHHHHHHHHHHHHHHHHHH LQLDADALEALSQASEESPDEARPL HCCCHHHHHHHHHHHCCCCHHCCCC >Mature Secondary Structure MQSRPLGRSGLQVSPLCFGGNVFGWTVDEPTTFSLIDAWLDAGFNFIDTADVYSRWNPGH CCCCCCCCCCCEECCEEECCCEEEEECCCCCHHHHHHHHHHCCCCCCCCHHHHHCCCCCC MGGESEALIGQWLKRTGKRDRIVLATKVGKDMGDGRVGLKPDYIRRAVEDSLRRLHTDYI CCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH DLYQSHDDDPSTPLEDTLGTYADLIREGKVRAIGASNHTAARLSEALATSARLGLPRYES HHHHCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCHHH LQPLYNLYDRAVFEDELQPLCLEQQVGVINFYALAAGFLTGKYRSEADASKSARGAKTVE HHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHCCHHCHHHHHHHHCHHHHHH KYLNPRGLRILAELDEVAERYEATPGQVAIAWQMAQPAITAPIASATSLEQLQDLVRAAH HHCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHCHHHHHHHHHHHHHHHHHH LQLDADALEALSQASEESPDEARPL HCCCHHHHHHHHHHHCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]