| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120611659
Identifier: 120611659
GI number: 120611659
Start: 3304085
End: 3304537
Strand: Reverse
Name: 120611659
Synonym: Aave_2996
Alternate gene names: NA
Gene position: 3304537-3304085 (Counterclockwise)
Preceding gene: 120611662
Following gene: 120611658
Centisome position: 61.74
GC content: 62.03
Gene sequence:
>453_bases ATGAAAGTCAGCGACATCCTCCGCGTCAAAGGCAACACGCTCTTCACCGTCACCGCCGACGAACCCCTGGCGAAAGCCGT GGAGGTCATGGCGGACAAGGACATCGGCTCGCTGGTGGTGATGGACCACGGCGACCTGGTCGGCATGCTCACCTTCCGCG AGGTCATCCAGGCCGTCGTGAAGAACGGCGGCACCGTGGGCACCATGCTCGTGCGCACGGCCATGGACGACGCGCCCCTC ACCTGCACGCTCGAAACCGAAATGGACGAGGTGCGCCGCATGATGCTCAACCGCCACGCGCGCTACATGCCGGTCATGGA CAAGAAGATGCTCATGGGCGTGGTCAGCTTCTACGACGTGGCCAAGGCCGTGGTGGACAGCCAGAACTTCGAGAACCAGA TGCTGAAAGCCTATATCCGGGACTGGCCAGAGGAAAAAGAGGCTACTCCCTGA
Upstream 100 bases:
>100_bases TATCTCCTATGGGTGATCGCAGCGCAACATTGTGGGCTATATTGCGCAGGAAACATCGATCGGCCCGCCGCAGCGGCGCG GCGCCCCCTGGAGACCTCCC
Downstream 100 bases:
>100_bases GCCGCTGCGCGGCTTCCCCCTTCTCTCGCTGCGCTGCGCGCATCGGGAAGGGGGACGACGCCAGTGGCCCGGCAAAGCCG GTTCCACGGCGTCTGCTGGC
Product: XRE family transcriptional regulator
Products: NA
Alternate protein names: Signal-Transduction Protein; Signal Transduction Protein With CBS Domains; CBS Domain Containing Protein; CBS Domain Protein; XRE Family Transcriptional Regulator; Signal Transduction Protein; Signal-Transduction Protein With CBS Domains; Signal Transduction Protein With Cbs Domains; CBS Domain Pair Family; IMP Dehydrogenase; CBS Domain-Containing Signal Transduction Protein; Transcriptional Regulator; Cbs Domain Containing Protein; Signal-Transduction Protein With CBS; Transcriptional Regulator XRE Family Protein; CBS Domain Containing Membrane Protein; CBS Domain Pair Family Protein; Inosine-5-Monophosphate Dehydrogenase; Transcriptional Regulator XRE Family; Inosine-5prime-Monophosphate Dehydrogenase Protein; Signal-Transduction Protein With Cbs Domains
Number of amino acids: Translated: 150; Mature: 150
Protein sequence:
>150_residues MKVSDILRVKGNTLFTVTADEPLAKAVEVMADKDIGSLVVMDHGDLVGMLTFREVIQAVVKNGGTVGTMLVRTAMDDAPL TCTLETEMDEVRRMMLNRHARYMPVMDKKMLMGVVSFYDVAKAVVDSQNFENQMLKAYIRDWPEEKEATP
Sequences:
>Translated_150_residues MKVSDILRVKGNTLFTVTADEPLAKAVEVMADKDIGSLVVMDHGDLVGMLTFREVIQAVVKNGGTVGTMLVRTAMDDAPL TCTLETEMDEVRRMMLNRHARYMPVMDKKMLMGVVSFYDVAKAVVDSQNFENQMLKAYIRDWPEEKEATP >Mature_150_residues MKVSDILRVKGNTLFTVTADEPLAKAVEVMADKDIGSLVVMDHGDLVGMLTFREVIQAVVKNGGTVGTMLVRTAMDDAPL TCTLETEMDEVRRMMLNRHARYMPVMDKKMLMGVVSFYDVAKAVVDSQNFENQMLKAYIRDWPEEKEATP
Specific function: Unknown
COG id: COG0517
COG function: function code R; FOG: CBS domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16819; Mature: 16819
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 9.3 %Met (Translated Protein) 10.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 9.3 %Met (Mature Protein) 10.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVSDILRVKGNTLFTVTADEPLAKAVEVMADKDIGSLVVMDHGDLVGMLTFREVIQAVV CCCHHHEEECCCEEEEEECCCHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHH KNGGTVGTMLVRTAMDDAPLTCTLETEMDEVRRMMLNRHARYMPVMDKKMLMGVVSFYDV HCCCCHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH AKAVVDSQNFENQMLKAYIRDWPEEKEATP HHHHHCCCCHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MKVSDILRVKGNTLFTVTADEPLAKAVEVMADKDIGSLVVMDHGDLVGMLTFREVIQAVV CCCHHHEEECCCEEEEEECCCHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHH KNGGTVGTMLVRTAMDDAPLTCTLETEMDEVRRMMLNRHARYMPVMDKKMLMGVVSFYDV HCCCCHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH AKAVVDSQNFENQMLKAYIRDWPEEKEATP HHHHHCCCCHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA