| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120611652
Identifier: 120611652
GI number: 120611652
Start: 3289921
End: 3292617
Strand: Reverse
Name: 120611652
Synonym: Aave_2989
Alternate gene names: NA
Gene position: 3292617-3289921 (Counterclockwise)
Preceding gene: 120611653
Following gene: 120611651
Centisome position: 61.51
GC content: 73.41
Gene sequence:
>2697_bases ATGTTTCCTTTTTCTTCTCGCAACAAAATGTCTGACGCCCCTGAAGTGACCCCGGCCCCGGCCAAAGCTTCCGAGCCGCA CCCGCTGGACGCGTTGACGGGCGGGGCCTTTTCCGCCGCCACGTCGGGCGAGCGCGCCTCGCGCATCCGCGACTGGCTGG CCACCCAGCCCACGCCCGAGCAGTTGCAGGAAGTGTTCAAGGAACTGAGCGGACGCGACAAGGGCGCGGCCCGCGCCGTG CGCGAACGCCTCGACGAGATCCGCCGCGCCAAGGGCCAGGAAGCCATCGCGGCCGAGTGGGCCGAGAAGGCCACCGCGCT GCTCGACGCCTCCCGCTTCCACATCGCCGACGCACTCGCCTGGCAGCGCGATGCGGCCAAAGCCGGTGCGCCGCTGTCCC GCGAGCCCCTGGCATCGCTCAAGGCGCGCCTGGCCGAACGCATGAAGGTGATCGAGGATCTGCAGCACCGCGTGCAGGTG CAGCGCGAGGCGGCCGTGCTGCTGGCCCAGCGCATCGACGTGCTCTCCACCAAGCCCTGGCGCGACGCGCAGGCGGCACT GGAGGCGCTGCGCGCCGACGTCGAGCGCTGGCAGCAGCAGGCCGACGAGCTGTCGGGCGATCCCGCATGGCCCAGCGTCG AGGCCCGCTTCCCGCCCCAGCTGGAGGCCTCGCGCACGCAATTGCTCGTGGTGTGGAACGCTTTCCAGCCGGCCATCGCG CAGGCGGCCGCCGCCGCCGAGAACCCCGAGGCGCCGCTGCCCCCCGTGCCGGTGTGGGCGGAGGAACTGCGCATCGCGCG CGGCGGCGAGCCGCTGGCCGAGGCGGCGGCTTCCGGCGCTGCTGCGCCGGCCGCTCCCGCCCGTGCCGCGGCCAAGACCG ATCCGGCGGTGCGCGAGAAAGCCGAGCAGGCCGTGCGCGCCGCGCTGGTCAGGCTGCAGGAAGAAACCGCCCAGGGCCAC GGCAAGGCGTCCGCAGGTGCGGCCACGGCCCTGCGCACCGTGCTGAAGCAGCATGGCCGCCATATCGACGCGGCTCTGGA ACACGACGTGCATACCGCGCTCGTCGCCGCTGGCGAACTGCAGGGCTGGCAGCGCTGGAGCGCCGACCAGGTGCGCGAGG ACCTCGTGGCCAAGGCGGAAGGACTGCTCAAGCGTCCCGAAGGCCAGGCACTGGGCGGCCGCAAGATCCAGGAAAGCCTG CGCCAGCTGCGCGAGCAGTGGAAGCAGACCGACCAGGGTGGCCCGGCGAACCATGCCCTGTGGAAGAAATTCGACGAGGC CTGCAATGCCGCCCACAAGGTGGTGGAGGCCTGGCTGGAGAAGGTGCGTTCCGACGCGGCCGAGCACAAAGCGCAACGCC TGGCGCTGATCCAGGAACTGCAGGCCTGGACGGCCGCACAGGCAGCGGGCGACGCGCAGCCCGACTGGAAGCAGGTGAGC CGTGCGCTGCACCAGTTCTCCGATCGCTGGCGCGAGGGCGGCCACGTCAATGAAAAGGTCTATGCCGAACTGCAGCCGCA GTGGAAGCAGGTCCTCTCCGAAGCGGCCGCGCCGCTGGAGGCGGCCCAGAAGCAGAGCCTGGCGCGCCGCCAGGCCATGA TCGACGAGGCTGTGGCGCTGGGCGCCGCACCGGTGCTGCGCATCGATGCGGTGAAGGCGCTGCAGCAGCGCTGGCAGGCC GAGGCCCAGTCCGTGCCGCTGGACCGCAAGCAGGAACAGAAGCTCTGGGATGCGTTCCGCAAGCCCATCGACGAGGCATT CAACCGCAAGACGGCCGATCGCCAGAAGGCCGCGGGCGAAATGAGCGCCCACGACCGGGCGGTTCTGGATGCGTCCAGGG CGGTGGAGGAGGCCAACGCGTCCGGCGATGCCCAGCAGATCCGCACGGCGCTGGCCGCGCTGGAGGCGGCCGTCCGGGGC CAGCAGCAGGCGGCGGCCGAGTCCGCAGCCTCCACGCAGGCTCCCGCTCCCGAGGCGGCCCCGGCCGAAGGCGCGGAGGC GGCCGGCGGCGATGCCGGCGCCGCGCCCGCTGCGGCGCCCAAGCCCGCGCGCCCCGTGGTGGCGGTGCGCGGCGATGACC GCCCGGGGGCCAGGCGCGACGTTCCCGCGCCGGCGGGCCGCCCGGGTCGCCCCGGCGAGCGGGACCGCAGGGACGGCCGT CCTGGACGTGACGGCCGCGACGGTGGAGACCGCGGCGGCCGCTTCGGCGACCGCGACCGCGCCGCGCAGGCCCGCGGCCC GCGCCTGGGTGACGCCGCATTCCGCGCCCAGCGCGAGGCGCAGGAGCATGCCCAGGCGGCGCTGCGCAGGCTGGCCGCGC AGGCGCACGGCGAAGCGCTGACCCAACTGCTCGCGGCATGGGAAAAGCGCGATGCATCGCAACTGCCGTCCGCGCAGGAG CTGGGTTCGCAGGTACCTGCCGGCGTGCGCAGCACCTGGGCGCAGGCGGTGTCGTCGGGGCCTTCGGGCGATGCGTCCGA GGCATTGCTGCGGCTGGAGATGGCGGCCGAGGTGCCTACGCCCGCGGAGCAATTGCCCGCGCGCCGCGCGCTGCAGCTGC AACTGCTGACGCGCCGCAATGACCCGCAGCCGGCGCAGACCTGGGCGCAGGACGCCGCGCGCGTGCTCGCCAGCGCGAGC GAGCCGGGCAATGCGCGGCGTTTCCAGCAGGCGCTGAAAGCGTTGCTCAAGGGCTGA
Upstream 100 bases:
>100_bases AAAACCGGGCCAAAATAGCGTCTTCGATGTTCGCCGGGCCGTGACCCGGCGGCGTACGGGCGCTGGTGCCTCCGGCACCT GGCCCCTCCTGACCAGAACC
Downstream 100 bases:
>100_bases TGGCCCCTCTGGCTGCCGGGGGCGGGTCCGTCGGTGCCCCCGGCGCGCGTTGCGCGCAGTGCATGGCCGCCGTGGCCATG TGACGCGACGCGGCCCGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 898; Mature: 898
Protein sequence:
>898_residues MFPFSSRNKMSDAPEVTPAPAKASEPHPLDALTGGAFSAATSGERASRIRDWLATQPTPEQLQEVFKELSGRDKGAARAV RERLDEIRRAKGQEAIAAEWAEKATALLDASRFHIADALAWQRDAAKAGAPLSREPLASLKARLAERMKVIEDLQHRVQV QREAAVLLAQRIDVLSTKPWRDAQAALEALRADVERWQQQADELSGDPAWPSVEARFPPQLEASRTQLLVVWNAFQPAIA QAAAAAENPEAPLPPVPVWAEELRIARGGEPLAEAAASGAAAPAAPARAAAKTDPAVREKAEQAVRAALVRLQEETAQGH GKASAGAATALRTVLKQHGRHIDAALEHDVHTALVAAGELQGWQRWSADQVREDLVAKAEGLLKRPEGQALGGRKIQESL RQLREQWKQTDQGGPANHALWKKFDEACNAAHKVVEAWLEKVRSDAAEHKAQRLALIQELQAWTAAQAAGDAQPDWKQVS RALHQFSDRWREGGHVNEKVYAELQPQWKQVLSEAAAPLEAAQKQSLARRQAMIDEAVALGAAPVLRIDAVKALQQRWQA EAQSVPLDRKQEQKLWDAFRKPIDEAFNRKTADRQKAAGEMSAHDRAVLDASRAVEEANASGDAQQIRTALAALEAAVRG QQQAAAESAASTQAPAPEAAPAEGAEAAGGDAGAAPAAAPKPARPVVAVRGDDRPGARRDVPAPAGRPGRPGERDRRDGR PGRDGRDGGDRGGRFGDRDRAAQARGPRLGDAAFRAQREAQEHAQAALRRLAAQAHGEALTQLLAAWEKRDASQLPSAQE LGSQVPAGVRSTWAQAVSSGPSGDASEALLRLEMAAEVPTPAEQLPARRALQLQLLTRRNDPQPAQTWAQDAARVLASAS EPGNARRFQQALKALLKG
Sequences:
>Translated_898_residues MFPFSSRNKMSDAPEVTPAPAKASEPHPLDALTGGAFSAATSGERASRIRDWLATQPTPEQLQEVFKELSGRDKGAARAV RERLDEIRRAKGQEAIAAEWAEKATALLDASRFHIADALAWQRDAAKAGAPLSREPLASLKARLAERMKVIEDLQHRVQV QREAAVLLAQRIDVLSTKPWRDAQAALEALRADVERWQQQADELSGDPAWPSVEARFPPQLEASRTQLLVVWNAFQPAIA QAAAAAENPEAPLPPVPVWAEELRIARGGEPLAEAAASGAAAPAAPARAAAKTDPAVREKAEQAVRAALVRLQEETAQGH GKASAGAATALRTVLKQHGRHIDAALEHDVHTALVAAGELQGWQRWSADQVREDLVAKAEGLLKRPEGQALGGRKIQESL RQLREQWKQTDQGGPANHALWKKFDEACNAAHKVVEAWLEKVRSDAAEHKAQRLALIQELQAWTAAQAAGDAQPDWKQVS RALHQFSDRWREGGHVNEKVYAELQPQWKQVLSEAAAPLEAAQKQSLARRQAMIDEAVALGAAPVLRIDAVKALQQRWQA EAQSVPLDRKQEQKLWDAFRKPIDEAFNRKTADRQKAAGEMSAHDRAVLDASRAVEEANASGDAQQIRTALAALEAAVRG QQQAAAESAASTQAPAPEAAPAEGAEAAGGDAGAAPAAAPKPARPVVAVRGDDRPGARRDVPAPAGRPGRPGERDRRDGR PGRDGRDGGDRGGRFGDRDRAAQARGPRLGDAAFRAQREAQEHAQAALRRLAAQAHGEALTQLLAAWEKRDASQLPSAQE LGSQVPAGVRSTWAQAVSSGPSGDASEALLRLEMAAEVPTPAEQLPARRALQLQLLTRRNDPQPAQTWAQDAARVLASAS EPGNARRFQQALKALLKG >Mature_898_residues MFPFSSRNKMSDAPEVTPAPAKASEPHPLDALTGGAFSAATSGERASRIRDWLATQPTPEQLQEVFKELSGRDKGAARAV RERLDEIRRAKGQEAIAAEWAEKATALLDASRFHIADALAWQRDAAKAGAPLSREPLASLKARLAERMKVIEDLQHRVQV QREAAVLLAQRIDVLSTKPWRDAQAALEALRADVERWQQQADELSGDPAWPSVEARFPPQLEASRTQLLVVWNAFQPAIA QAAAAAENPEAPLPPVPVWAEELRIARGGEPLAEAAASGAAAPAAPARAAAKTDPAVREKAEQAVRAALVRLQEETAQGH GKASAGAATALRTVLKQHGRHIDAALEHDVHTALVAAGELQGWQRWSADQVREDLVAKAEGLLKRPEGQALGGRKIQESL RQLREQWKQTDQGGPANHALWKKFDEACNAAHKVVEAWLEKVRSDAAEHKAQRLALIQELQAWTAAQAAGDAQPDWKQVS RALHQFSDRWREGGHVNEKVYAELQPQWKQVLSEAAAPLEAAQKQSLARRQAMIDEAVALGAAPVLRIDAVKALQQRWQA EAQSVPLDRKQEQKLWDAFRKPIDEAFNRKTADRQKAAGEMSAHDRAVLDASRAVEEANASGDAQQIRTALAALEAAVRG QQQAAAESAASTQAPAPEAAPAEGAEAAGGDAGAAPAAAPKPARPVVAVRGDDRPGARRDVPAPAGRPGRPGERDRRDGR PGRDGRDGGDRGGRFGDRDRAAQARGPRLGDAAFRAQREAQEHAQAALRRLAAQAHGEALTQLLAAWEKRDASQLPSAQE LGSQVPAGVRSTWAQAVSSGPSGDASEALLRLEMAAEVPTPAEQLPARRALQLQLLTRRNDPQPAQTWAQDAARVLASAS EPGNARRFQQALKALLKG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 96557; Mature: 96557
Theoretical pI: Translated: 9.53; Mature: 9.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFPFSSRNKMSDAPEVTPAPAKASEPHPLDALTGGAFSAATSGERASRIRDWLATQPTPE CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCHHHHCCCHHHHHHHHHHCCCCCHH QLQEVFKELSGRDKGAARAVRERLDEIRRAKGQEAIAAEWAEKATALLDASRFHIADALA HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH WQRDAAKAGAPLSREPLASLKARLAERMKVIEDLQHRVQVQREAAVLLAQRIDVLSTKPW HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC RDAQAALEALRADVERWQQQADELSGDPAWPSVEARFPPQLEASRTQLLVVWNAFQPAIA CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHH QAAAAAENPEAPLPPVPVWAEELRIARGGEPLAEAAASGAAAPAAPARAAAKTDPAVREK HHHHHCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHCCCCCCCCCHHHHHCCCHHHHHH AEQAVRAALVRLQEETAQGHGKASAGAATALRTVLKQHGRHIDAALEHDVHTALVAAGEL HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH QGWQRWSADQVREDLVAKAEGLLKRPEGQALGGRKIQESLRQLREQWKQTDQGGPANHAL HHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHH WKKFDEACNAAHKVVEAWLEKVRSDAAEHKAQRLALIQELQAWTAAQAAGDAQPDWKQVS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH RALHQFSDRWREGGHVNEKVYAELQPQWKQVLSEAAAPLEAAQKQSLARRQAMIDEAVAL HHHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GAAPVLRIDAVKALQQRWQAEAQSVPLDRKQEQKLWDAFRKPIDEAFNRKTADRQKAAGE CCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH MSAHDRAVLDASRAVEEANASGDAQQIRTALAALEAAVRGQQQAAAESAASTQAPAPEAA HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC PAEGAEAAGGDAGAAPAAAPKPARPVVAVRGDDRPGARRDVPAPAGRPGRPGERDRRDGR CCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PGRDGRDGGDRGGRFGDRDRAAQARGPRLGDAAFRAQREAQEHAQAALRRLAAQAHGEAL CCCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TQLLAAWEKRDASQLPSAQELGSQVPAGVRSTWAQAVSSGPSGDASEALLRLEMAAEVPT HHHHHHHHHCCHHHCCCHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCC PAEQLPARRALQLQLLTRRNDPQPAQTWAQDAARVLASASEPGNARRFQQALKALLKG CHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure MFPFSSRNKMSDAPEVTPAPAKASEPHPLDALTGGAFSAATSGERASRIRDWLATQPTPE CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCHHHHCCCHHHHHHHHHHCCCCCHH QLQEVFKELSGRDKGAARAVRERLDEIRRAKGQEAIAAEWAEKATALLDASRFHIADALA HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH WQRDAAKAGAPLSREPLASLKARLAERMKVIEDLQHRVQVQREAAVLLAQRIDVLSTKPW HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC RDAQAALEALRADVERWQQQADELSGDPAWPSVEARFPPQLEASRTQLLVVWNAFQPAIA CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHH QAAAAAENPEAPLPPVPVWAEELRIARGGEPLAEAAASGAAAPAAPARAAAKTDPAVREK HHHHHCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHCCCCCCCCCHHHHHCCCHHHHHH AEQAVRAALVRLQEETAQGHGKASAGAATALRTVLKQHGRHIDAALEHDVHTALVAAGEL HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH QGWQRWSADQVREDLVAKAEGLLKRPEGQALGGRKIQESLRQLREQWKQTDQGGPANHAL HHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHH WKKFDEACNAAHKVVEAWLEKVRSDAAEHKAQRLALIQELQAWTAAQAAGDAQPDWKQVS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH RALHQFSDRWREGGHVNEKVYAELQPQWKQVLSEAAAPLEAAQKQSLARRQAMIDEAVAL HHHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GAAPVLRIDAVKALQQRWQAEAQSVPLDRKQEQKLWDAFRKPIDEAFNRKTADRQKAAGE CCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH MSAHDRAVLDASRAVEEANASGDAQQIRTALAALEAAVRGQQQAAAESAASTQAPAPEAA HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC PAEGAEAAGGDAGAAPAAAPKPARPVVAVRGDDRPGARRDVPAPAGRPGRPGERDRRDGR CCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PGRDGRDGGDRGGRFGDRDRAAQARGPRLGDAAFRAQREAQEHAQAALRRLAAQAHGEAL CCCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TQLLAAWEKRDASQLPSAQELGSQVPAGVRSTWAQAVSSGPSGDASEALLRLEMAAEVPT HHHHHHHHHCCHHHCCCHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCC PAEQLPARRALQLQLLTRRNDPQPAQTWAQDAARVLASASEPGNARRFQQALKALLKG CHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA