Click here to switch to the map view.

The map label for this gene is 120611593

Identifier: 120611593

GI number: 120611593

Start: 3218300

End: 3219532

Strand: Reverse

Name: 120611593

Synonym: Aave_2929

Alternate gene names: NA

Gene position: 3219532-3218300 (Counterclockwise)

Preceding gene: 120611594

Following gene: 120611592

Centisome position: 60.15

GC content: 68.21

Gene sequence:

>1233_bases
ATGTCCGAATCCCGTGCGTATCTGACCCAATTCCGCCCCCGTTTCCGCCCTCCCAGCGCCGCGGACCTGTGCACGCCCGT
GCCGTGCATGACCGCCGGCCAGACGAACGAGGACGTCATGGAGGCGTTCAGCCGCCACCGGGATCTCGCCGCGCTGCCCG
TGGTGGAAGACGGGCGGCCCATCGGCCTCATCAACCGCAACATCTTCCTTTCGCAGATGAGCAAGCAGTTCCGCATGGAA
CTGTACGGCCGCAAGAGCTGCATCGCCTTCATGGACAAGGAACCCCTCGTCGTGGACGTGGCGATGGACATCGACACGCT
CACCCGCCGGGCGGTGGAGTATGGCGAGAAGGCGCTGTCCGACGGCTTCATCATCACCCGCGAGGACGCGTTCGCCGGCG
TGGGCAACGGGCTGCAGCTGATGCGCGTGGTGGCGGACATGCAGGCGTCCCGCAACCGGCAGATCATGCACAGCATCGAG
TACGCCAGCGTGATACAGCAGTCCACGCTGCGCACTTCGCGGGAGACGCTGGCGCGTGCCTGTCCGCAGGCCGCCCTGGT
GTGGGAGCCGCGCGACGTGGTGGGGGGCGATTTCTACCAGTTCAGCCTCGCGGACGACGGATGGTTCGGGGCCGTGGCGG
ACTGCACCGGCCATGGCGTGCCCGGCGCGTTCATGACGCTCATCGCGTCCACCAGCCTGGGCCAGGCGATCGAGCGGCAC
GGACCGCGCGATCCTGCGTGCCTGCTGGCCAGCGTGAACCAGAGCATCAAGCAGGTCCTGGGCCAGGTGGACGGCAAGGA
CGAGACGCCGGGTTCCGACGACGGCATGGACGCCGCCTTTTTCTGGTACGAGCCCGCCGCCGAGCGGCTGGTGTTCTCCG
GCGCCCGGCTCTCGCTCCATGTGCTGCGGCCCGGCGCCGACGCGGTGGAAACCGCCGAAGGCCAGCGCAAGGGCGTGGGC
TACGTGGACAGCGGGATGGATTACGCATGGCAGAACCAGACGCTGCACCTGCCGGCAGGCAGCCTCGTATTCGTCACCAC
GGACGGGCTGATCGATCAGGTGGGCGGCCCGCGCGCCATCGCGCTGGGCAAGCGCCGGATTCGCGATCTGTTGCTGGGCC
ACCGGGACGGCCGGCCGGAGGACATCAACCGTGCCATGCGGGACGCCCTGAACCAATGGCAGGGAGAACACGAACGGCGC
GACGACGTGACGTTCCTGTGCTTCCGAGCCTGA

Upstream 100 bases:

>100_bases
CATGTCCGAAAGCCAATTGTCATCGGCCAGGCGATAGTTGTCATCAAACGGAAATGTTGTGTCATTAACATTTGCTGACA
TCATTTCCGGCGCCGCAGGC

Downstream 100 bases:

>100_bases
AGCCGCCCCCTTCTCCACGACGTCCCGCAGCAATGCCTTTCCCCATGATTTCCAGCAAGTACGGCCCCTTCTTCAGCGTC
GCCCGGGAACACCAGGTGAT

Product: serine phosphatase

Products: NA

Alternate protein names: Diguanylate Cyclase/Phosphodiesterase; Serine Phosphatase; Diguanylate Cyclase; Stage II Sporulation E Family Protein; Signal Transduction Protein; Serine Phosphatase RsbU Regulator Of Sigma Subunit; Bacterial Signal Domain Protein; Phosphatase; Signal Domain Protein; Response Regulator Receiver Domain Protein; Serine Phosphatase RsbU; Histidine Kinase; Pas/Pac Sensor Protein; HAMP Domain-Containing; Sensor Kinase; Cyclic Diguanylate Phosphodiesterase Domain Protein; CBS Sensor Hybrid Histidine Kinase; Serine/Threonine Protein Kinase; Serine Phosphatase Regulator Of Sigma Subunit; CBS Sensor Signal Transduction Histidine Kinase; CBS/GGDEF/EAL Domain-Containing Protein; Stage II Sporulation Protein E; Signaling Protein; Sigma Factor SigB Regulation Protein RsbU; EAL Domain-Containing; Sensor Histidine Kinase/Response Regulator

Number of amino acids: Translated: 410; Mature: 409

Protein sequence:

>410_residues
MSESRAYLTQFRPRFRPPSAADLCTPVPCMTAGQTNEDVMEAFSRHRDLAALPVVEDGRPIGLINRNIFLSQMSKQFRME
LYGRKSCIAFMDKEPLVVDVAMDIDTLTRRAVEYGEKALSDGFIITREDAFAGVGNGLQLMRVVADMQASRNRQIMHSIE
YASVIQQSTLRTSRETLARACPQAALVWEPRDVVGGDFYQFSLADDGWFGAVADCTGHGVPGAFMTLIASTSLGQAIERH
GPRDPACLLASVNQSIKQVLGQVDGKDETPGSDDGMDAAFFWYEPAAERLVFSGARLSLHVLRPGADAVETAEGQRKGVG
YVDSGMDYAWQNQTLHLPAGSLVFVTTDGLIDQVGGPRAIALGKRRIRDLLLGHRDGRPEDINRAMRDALNQWQGEHERR
DDVTFLCFRA

Sequences:

>Translated_410_residues
MSESRAYLTQFRPRFRPPSAADLCTPVPCMTAGQTNEDVMEAFSRHRDLAALPVVEDGRPIGLINRNIFLSQMSKQFRME
LYGRKSCIAFMDKEPLVVDVAMDIDTLTRRAVEYGEKALSDGFIITREDAFAGVGNGLQLMRVVADMQASRNRQIMHSIE
YASVIQQSTLRTSRETLARACPQAALVWEPRDVVGGDFYQFSLADDGWFGAVADCTGHGVPGAFMTLIASTSLGQAIERH
GPRDPACLLASVNQSIKQVLGQVDGKDETPGSDDGMDAAFFWYEPAAERLVFSGARLSLHVLRPGADAVETAEGQRKGVG
YVDSGMDYAWQNQTLHLPAGSLVFVTTDGLIDQVGGPRAIALGKRRIRDLLLGHRDGRPEDINRAMRDALNQWQGEHERR
DDVTFLCFRA
>Mature_409_residues
SESRAYLTQFRPRFRPPSAADLCTPVPCMTAGQTNEDVMEAFSRHRDLAALPVVEDGRPIGLINRNIFLSQMSKQFRMEL
YGRKSCIAFMDKEPLVVDVAMDIDTLTRRAVEYGEKALSDGFIITREDAFAGVGNGLQLMRVVADMQASRNRQIMHSIEY
ASVIQQSTLRTSRETLARACPQAALVWEPRDVVGGDFYQFSLADDGWFGAVADCTGHGVPGAFMTLIASTSLGQAIERHG
PRDPACLLASVNQSIKQVLGQVDGKDETPGSDDGMDAAFFWYEPAAERLVFSGARLSLHVLRPGADAVETAEGQRKGVGY
VDSGMDYAWQNQTLHLPAGSLVFVTTDGLIDQVGGPRAIALGKRRIRDLLLGHRDGRPEDINRAMRDALNQWQGEHERRD
DVTFLCFRA

Specific function: Unknown

COG id: COG2208

COG function: function code TK; Serine phosphatase RsbU, regulator of sigma subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45230; Mature: 45099

Theoretical pI: Translated: 5.48; Mature: 5.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSESRAYLTQFRPRFRPPSAADLCTPVPCMTAGQTNEDVMEAFSRHRDLAALPVVEDGRP
CCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEECCEECCCCC
IGLINRNIFLSQMSKQFRMELYGRKSCIAFMDKEPLVVDVAMDIDTLTRRAVEYGEKALS
EEEEECHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEEECCHHHHHHHHHHHHHHHHC
DGFIITREDAFAGVGNGLQLMRVVADMQASRNRQIMHSIEYASVIQQSTLRTSRETLARA
CCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CPQAALVWEPRDVVGGDFYQFSLADDGWFGAVADCTGHGVPGAFMTLIASTSLGQAIERH
CCCCEEEECCCHHCCCCEEEEEECCCCCCCEEHHCCCCCCCHHHHHHHHHHHHHHHHHHC
GPRDPACLLASVNQSIKQVLGQVDGKDETPGSDDGMDAAFFWYEPAAERLVFSGARLSLH
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCHHHHHEECCCEEEEE
VLRPGADAVETAEGQRKGVGYVDSGMDYAWQNQTLHLPAGSLVFVTTDGLIDQVGGPRAI
EECCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEECCCHHHHCCCCEEE
ALGKRRIRDLLLGHRDGRPEDINRAMRDALNQWQGEHERRDDVTFLCFRA
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEC
>Mature Secondary Structure 
SESRAYLTQFRPRFRPPSAADLCTPVPCMTAGQTNEDVMEAFSRHRDLAALPVVEDGRP
CCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEECCEECCCCC
IGLINRNIFLSQMSKQFRMELYGRKSCIAFMDKEPLVVDVAMDIDTLTRRAVEYGEKALS
EEEEECHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEEECCHHHHHHHHHHHHHHHHC
DGFIITREDAFAGVGNGLQLMRVVADMQASRNRQIMHSIEYASVIQQSTLRTSRETLARA
CCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CPQAALVWEPRDVVGGDFYQFSLADDGWFGAVADCTGHGVPGAFMTLIASTSLGQAIERH
CCCCEEEECCCHHCCCCEEEEEECCCCCCCEEHHCCCCCCCHHHHHHHHHHHHHHHHHHC
GPRDPACLLASVNQSIKQVLGQVDGKDETPGSDDGMDAAFFWYEPAAERLVFSGARLSLH
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCHHHHHEECCCEEEEE
VLRPGADAVETAEGQRKGVGYVDSGMDYAWQNQTLHLPAGSLVFVTTDGLIDQVGGPRAI
EECCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEECCCHHHHCCCCEEE
ALGKRRIRDLLLGHRDGRPEDINRAMRDALNQWQGEHERRDDVTFLCFRA
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA