| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
Click here to switch to the map view.
The map label for this gene is 120611581
Identifier: 120611581
GI number: 120611581
Start: 3208873
End: 3209493
Strand: Direct
Name: 120611581
Synonym: Aave_2917
Alternate gene names: NA
Gene position: 3208873-3209493 (Clockwise)
Preceding gene: 120611580
Following gene: 120611582
Centisome position: 59.95
GC content: 65.06
Gene sequence:
>621_bases ATGACCACAGCCTATGTGCCGAGAGAGGGCAGCGCGGCCTGGAAAGTGATTCAGTACCTGCGGGCCAATCCCGAGGAGCA TCTCGACCCAGATGTGATCGCCGCGAGGTGTGATTGCGGACGTGCGAGCGTCCACACGCTGATGGGTCCGTCCGTCGAGG CCAAGCTGCTCAAGCGGCAGGAGGACCTGGAAAGCGGCGAACTGGTCTACAGCTTGGGGCCAGTGCGCACCGAACTGGCA GGACAGGCGCCAGAGCGGCTGAGCGGCTTCCACGGCTGGCTGGAGCGCAAAGGGCTGCATTCAGCAGAAGGGCGCTCCGC GCGCAGCCCGGCGACAGCGGTACCGGCCAAGCCTCCTGCCACCCGCAAGCCGCCGGCCGCACCATTCAGCGTCGACCTCG CGACGATCACGGTCGAGAAGGCCGTCCCACTTCCCAATCGGCGAAGCACGATGGACTGGACGCCGCTGCTGGACACGCTG GAAGTCGGTGACTCCTTCGCGCTTCCGGTCGCCGCACGGTCATCTATCACAGGCGCAATTAAAGCCTACAAGGATGCCAC ACAGCGGGTGCTGACATGCCGCACGCTGGGCGACCAGATCCGTGTGTGGAGGACGAAATGA
Upstream 100 bases:
>100_bases TGGTCCGTCGCCAAGGCGAGGACCCCACCAAGGCCATCACCATCGATGGCGGCATTCAGCGCGACGTGACCATTTCTGAA ACAAAGAAAGGTGGTGCGAA
Downstream 100 bases:
>100_bases GCCGCACTCCTCCCAAATCGGTGCCCATGGCCTGCTTGACCATCGGCCATTACGACTACCTGCTGCCCGCCGCCAAAGCG ATCAAGGCCGCAGAGATCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 206; Mature: 205
Protein sequence:
>206_residues MTTAYVPREGSAAWKVIQYLRANPEEHLDPDVIAARCDCGRASVHTLMGPSVEAKLLKRQEDLESGELVYSLGPVRTELA GQAPERLSGFHGWLERKGLHSAEGRSARSPATAVPAKPPATRKPPAAPFSVDLATITVEKAVPLPNRRSTMDWTPLLDTL EVGDSFALPVAARSSITGAIKAYKDATQRVLTCRTLGDQIRVWRTK
Sequences:
>Translated_206_residues MTTAYVPREGSAAWKVIQYLRANPEEHLDPDVIAARCDCGRASVHTLMGPSVEAKLLKRQEDLESGELVYSLGPVRTELA GQAPERLSGFHGWLERKGLHSAEGRSARSPATAVPAKPPATRKPPAAPFSVDLATITVEKAVPLPNRRSTMDWTPLLDTL EVGDSFALPVAARSSITGAIKAYKDATQRVLTCRTLGDQIRVWRTK >Mature_205_residues TTAYVPREGSAAWKVIQYLRANPEEHLDPDVIAARCDCGRASVHTLMGPSVEAKLLKRQEDLESGELVYSLGPVRTELAG QAPERLSGFHGWLERKGLHSAEGRSARSPATAVPAKPPATRKPPAAPFSVDLATITVEKAVPLPNRRSTMDWTPLLDTLE VGDSFALPVAARSSITGAIKAYKDATQRVLTCRTLGDQIRVWRTK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22407; Mature: 22276
Theoretical pI: Translated: 9.53; Mature: 9.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTAYVPREGSAAWKVIQYLRANPEEHLDPDVIAARCDCGRASVHTLMGPSVEAKLLKRQ CCCCCCCCCCCHHHHHHHHHHCCCHHCCCHHHEEEECCCCCHHHHHHCCCCHHHHHHHHH EDLESGELVYSLGPVRTELAGQAPERLSGFHGWLERKGLHSAEGRSARSPATAVPAKPPA HCCCCCCEEEECCCHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC TRKPPAAPFSVDLATITVEKAVPLPNRRSTMDWTPLLDTLEVGDSFALPVAARSSITGAI CCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCEECCHHHHHHHHHHH KAYKDATQRVLTCRTLGDQIRVWRTK HHHHHHHHHHHHHHHCCCCEEEEECC >Mature Secondary Structure TTAYVPREGSAAWKVIQYLRANPEEHLDPDVIAARCDCGRASVHTLMGPSVEAKLLKRQ CCCCCCCCCCHHHHHHHHHHCCCHHCCCHHHEEEECCCCCHHHHHHCCCCHHHHHHHHH EDLESGELVYSLGPVRTELAGQAPERLSGFHGWLERKGLHSAEGRSARSPATAVPAKPPA HCCCCCCEEEECCCHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC TRKPPAAPFSVDLATITVEKAVPLPNRRSTMDWTPLLDTLEVGDSFALPVAARSSITGAI CCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCEECCHHHHHHHHHHH KAYKDATQRVLTCRTLGDQIRVWRTK HHHHHHHHHHHHHHHCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA