| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120611557
Identifier: 120611557
GI number: 120611557
Start: 3187954
End: 3188454
Strand: Reverse
Name: 120611557
Synonym: Aave_2893
Alternate gene names: NA
Gene position: 3188454-3187954 (Counterclockwise)
Preceding gene: 120611558
Following gene: 120611556
Centisome position: 59.57
GC content: 69.46
Gene sequence:
>501_bases GTGAACCTGTCGATCAACATGGGCTCGCTCCAGTCGTTCCAACGCGGGCTGCGCGAGGCGCCCGAGTACACCGACCAGGT GCTCCTGTCCGCAATGACCGAGGCCACGCTGCTGCTGCAACGCGAGTGGCAGGAGCGCCTGCCGCGTGCATCGGGCCTCA CGGCGTCCAGCATTACCAGTGACGTGGCGAGCACGCCCGCGGGGGTGCTGGGCATCGTGGGCAGCAGTCAGCCGTCCGCG CTGTTCGTGGAACTGGGCACGCGCCCGCACATGCCGCCGGTCGCTGCGATCGAGCCCTGGGTGCGTGCGGTGCTCGGCAT TCGCGAGCCCAAGGACGTCAAGCGCGTGGCGTTCCTGGTCGCGCGAAAGATCGCCGAGGAGGGCACCCCCGCGCAGCGCC CCATGGCGCGCGCTGCGCAGGCCACCGAAGGGCAGATCGTGGCGATGTTTGAACGTGCGGCCGACCAGGTCGCGAAGTAT CTCGAAGGGGCCGCATCGTGA
Upstream 100 bases:
>100_bases AGGCCGGGGCCTCCTCCAGCGCACCGGGCGCCGCAGCCGCGGCGGTCGTGAGCTGGCCGTCGCGCAATCCGCGCCACAGC CTGGTGCGGCGAGGCCTGCT
Downstream 100 bases:
>100_bases CCATGCCGAACACCCTGGCCGCATCGCGCTCCGCGCTGCAGGCCGTCCTGCGGGCCGTGCCCGCCGTTGGCGTGGTGCAC CCCTGCGAGCGCTTCGCGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 166; Mature: 166
Protein sequence:
>166_residues MNLSINMGSLQSFQRGLREAPEYTDQVLLSAMTEATLLLQREWQERLPRASGLTASSITSDVASTPAGVLGIVGSSQPSA LFVELGTRPHMPPVAAIEPWVRAVLGIREPKDVKRVAFLVARKIAEEGTPAQRPMARAAQATEGQIVAMFERAADQVAKY LEGAAS
Sequences:
>Translated_166_residues MNLSINMGSLQSFQRGLREAPEYTDQVLLSAMTEATLLLQREWQERLPRASGLTASSITSDVASTPAGVLGIVGSSQPSA LFVELGTRPHMPPVAAIEPWVRAVLGIREPKDVKRVAFLVARKIAEEGTPAQRPMARAAQATEGQIVAMFERAADQVAKY LEGAAS >Mature_166_residues MNLSINMGSLQSFQRGLREAPEYTDQVLLSAMTEATLLLQREWQERLPRASGLTASSITSDVASTPAGVLGIVGSSQPSA LFVELGTRPHMPPVAAIEPWVRAVLGIREPKDVKRVAFLVARKIAEEGTPAQRPMARAAQATEGQIVAMFERAADQVAKY LEGAAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17828; Mature: 17828
Theoretical pI: Translated: 7.54; Mature: 7.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLSINMGSLQSFQRGLREAPEYTDQVLLSAMTEATLLLQREWQERLPRASGLTASSITS CCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH DVASTPAGVLGIVGSSQPSALFVELGTRPHMPPVAAIEPWVRAVLGIREPKDVKRVAFLV HHHHCCCHHEEECCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHH ARKIAEEGTPAQRPMARAAQATEGQIVAMFERAADQVAKYLEGAAS HHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNLSINMGSLQSFQRGLREAPEYTDQVLLSAMTEATLLLQREWQERLPRASGLTASSITS CCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH DVASTPAGVLGIVGSSQPSALFVELGTRPHMPPVAAIEPWVRAVLGIREPKDVKRVAFLV HHHHCCCHHEEECCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHH ARKIAEEGTPAQRPMARAAQATEGQIVAMFERAADQVAKYLEGAAS HHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA