| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120611536
Identifier: 120611536
GI number: 120611536
Start: 3162556
End: 3162969
Strand: Reverse
Name: 120611536
Synonym: Aave_2872
Alternate gene names: NA
Gene position: 3162969-3162556 (Counterclockwise)
Preceding gene: 120611537
Following gene: 120611535
Centisome position: 59.09
GC content: 66.91
Gene sequence:
>414_bases TTGAGCTTCGGCGCCGAAATTCCCTTTGTCAGCCACCTCGGCTTCACCCTGCACCATATGCAGGGCGGAGAATCCGAGCT GCATTACACCGCGCAGCCGGACCACCTGAATTCCTTCGGCGTCACCCACGGCGGCGCCACCATGACCCTGATGGATGTCG CCATGGCCACGGCGGCCCGCAGCGACGTGCCGCCCGACATCGGCGTGGTCACCATCGAGATGAAGACCAGTTTCATGCAG GCCGCCCGCGGGCCGCTGGTGGCGCGGGGCCGGCTCCTGCACCGCACGACCGCGCTCGCCTTCACGGAAGCCAGCATCCA CGACGCCGAAGGGCGCCTCTGCAGCCATGCCACCGGCACCTTCAAATACATGAAGCGGCCCGCACAGCCCGCGGCATCGG TTCCTACCGACTGA
Upstream 100 bases:
>100_bases GGCGCATCACGCACCGCACCGCCGCGCGCCTGCTTCGCTGCGGCGGCTGCGTTCGCTATGCTGGCAGCTTCCCAGATCCC CTGATGGAGTGTCCCCCGTG
Downstream 100 bases:
>100_bases CCCGTTTCCCTGCGTATTTCCCGTTTTACCGAAAAAGGAGAACTCCATGCCACGCAACCAGCAGATCCTCCTGGACAGCC GCCCGCAGGGCGAAGCCACC
Product: hypothetical protein
Products: NA
Alternate protein names: Phenylacetic Acid Degradation-Related Protein; Phenylacetic Acid Degradation-Like Protein; Aromatic Compounds Catabolic Protein; Thioesterase-Related Protein; Thioesterase Superfamily; Thioesterase; Aromatic Compounds Degradation Protein PaaI; Thioesterase Family Protein
Number of amino acids: Translated: 137; Mature: 136
Protein sequence:
>137_residues MSFGAEIPFVSHLGFTLHHMQGGESELHYTAQPDHLNSFGVTHGGATMTLMDVAMATAARSDVPPDIGVVTIEMKTSFMQ AARGPLVARGRLLHRTTALAFTEASIHDAEGRLCSHATGTFKYMKRPAQPAASVPTD
Sequences:
>Translated_137_residues MSFGAEIPFVSHLGFTLHHMQGGESELHYTAQPDHLNSFGVTHGGATMTLMDVAMATAARSDVPPDIGVVTIEMKTSFMQ AARGPLVARGRLLHRTTALAFTEASIHDAEGRLCSHATGTFKYMKRPAQPAASVPTD >Mature_136_residues SFGAEIPFVSHLGFTLHHMQGGESELHYTAQPDHLNSFGVTHGGATMTLMDVAMATAARSDVPPDIGVVTIEMKTSFMQA ARGPLVARGRLLHRTTALAFTEASIHDAEGRLCSHATGTFKYMKRPAQPAASVPTD
Specific function: Unknown
COG id: COG2050
COG function: function code Q; Uncharacterized protein, possibly involved in aromatic compounds catabolism
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14649; Mature: 14518
Theoretical pI: Translated: 7.03; Mature: 7.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 5.8 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFGAEIPFVSHLGFTLHHMQGGESELHYTAQPDHLNSFGVTHGGATMTLMDVAMATAAR CCCCCCCCCHHHCCEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHC SDVPPDIGVVTIEMKTSFMQAARGPLVARGRLLHRTTALAFTEASIHDAEGRLCSHATGT CCCCCCCCEEEEEEHHHHHHHHCCCCCCCCCHHHHHHHHEEECCCCCCCCCCEECCCCCH FKYMKRPAQPAASVPTD HHHHHCCCCCCCCCCCC >Mature Secondary Structure SFGAEIPFVSHLGFTLHHMQGGESELHYTAQPDHLNSFGVTHGGATMTLMDVAMATAAR CCCCCCCCHHHCCEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHC SDVPPDIGVVTIEMKTSFMQAARGPLVARGRLLHRTTALAFTEASIHDAEGRLCSHATGT CCCCCCCCEEEEEEHHHHHHHHCCCCCCCCCHHHHHHHHEEECCCCCCCCCCEECCCCCH FKYMKRPAQPAASVPTD HHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA