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The map label for this gene is ynfA [C]

Identifier: 120611509

GI number: 120611509

Start: 3134264

End: 3134599

Strand: Reverse

Name: ynfA [C]

Synonym: Aave_2845

Alternate gene names: 120611509

Gene position: 3134599-3134264 (Counterclockwise)

Preceding gene: 120611510

Following gene: 120611507

Centisome position: 58.56

GC content: 72.32

Gene sequence:

>336_bases
ATGGTGGAACTCAAGACCTTCCTCCTGTACGCCGTGACGGCCCTGGCGGAGATCGCCGGCTGCTACCTGCCGTGGCTGTG
GCTGCGCCAGGACCGCAGCGCCTGGCTCCTGGTGCCGGGGGCTGCGTGCCTGGCCCTGTTCGCCTGGCTGCTGACCCTGC
ATCCGGCAGCAGCCGGACGCGTCTATGCCGCCTATGGCGGGGTGTATGTCGCCGTTGCGCTGGGGTGGCTCTGGGCGGTG
GACGGCATCCGGCCCGACCGCTGGGATCTCGCCGGCGCGGCGGTGACCCTGGCGGGCATGGCCATCATCGCTTTCGCGCC
CCGCGGCGCGGCCTGA

Upstream 100 bases:

>100_bases
GGGGGCGGACGACTTCGAGCAACTGGTTCTTTCCTTCCCGCAGCAGGACGCGCCCGGCGCGCCCGCTGCGTCCCCGGTAC
CGGGCTGAGACGGCACGCGC

Downstream 100 bases:

>100_bases
GACCGGGCATTCCGGCCCGCCGGGCTGCGGCCGTCGCCGCGGGCTGCGCCTCAACGGAAGAGCGACCGCAATTCGCTGCG
GGACATGCCGCCGCCGATGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 111; Mature: 111

Protein sequence:

>111_residues
MVELKTFLLYAVTALAEIAGCYLPWLWLRQDRSAWLLVPGAACLALFAWLLTLHPAAAGRVYAAYGGVYVAVALGWLWAV
DGIRPDRWDLAGAAVTLAGMAIIAFAPRGAA

Sequences:

>Translated_111_residues
MVELKTFLLYAVTALAEIAGCYLPWLWLRQDRSAWLLVPGAACLALFAWLLTLHPAAAGRVYAAYGGVYVAVALGWLWAV
DGIRPDRWDLAGAAVTLAGMAIIAFAPRGAA
>Mature_111_residues
MVELKTFLLYAVTALAEIAGCYLPWLWLRQDRSAWLLVPGAACLALFAWLLTLHPAAAGRVYAAYGGVYVAVALGWLWAV
DGIRPDRWDLAGAAVTLAGMAIIAFAPRGAA

Specific function: Unknown

COG id: COG1742

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0060 family

Homologues:

Organism=Escherichia coli, GI1787865, Length=100, Percent_Identity=62, Blast_Score=121, Evalue=9e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2845_ACIAC (A1TR25)

Other databases:

- EMBL:   CP000512
- RefSeq:   YP_971187.1
- STRING:   A1TR25
- GeneID:   4667464
- GenomeReviews:   CP000512_GR
- KEGG:   aav:Aave_2845
- NMPDR:   fig|397945.5.peg.2418
- eggNOG:   COG1742
- HOGENOM:   HBG313568
- OMA:   MAILWLW
- PhylomeDB:   A1TR25
- ProtClustDB:   CLSK732513
- BioCyc:   AAVE397945:AAVE_2845-MONOMER
- HAMAP:   MF_00010
- InterPro:   IPR003844

Pfam domain/function: PF02694 UPF0060

EC number: NA

Molecular weight: Translated: 11874; Mature: 11874

Theoretical pI: Translated: 8.20; Mature: 8.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x11480770)-; HASH(0x1595f3a0)-; HASH(0x159a9da0)-; HASH(0x159d2fcc)-;

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVELKTFLLYAVTALAEIAGCYLPWLWLRQDRSAWLLVPGAACLALFAWLLTLHPAAAGR
CCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEECCHHHHHHHHHHHHHCCCCCCE
VYAAYGGVYVAVALGWLWAVDGIRPDRWDLAGAAVTLAGMAIIAFAPRGAA
EEHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHEECCCCCH
>Mature Secondary Structure
MVELKTFLLYAVTALAEIAGCYLPWLWLRQDRSAWLLVPGAACLALFAWLLTLHPAAAGR
CCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEECCHHHHHHHHHHHHHCCCCCCE
VYAAYGGVYVAVALGWLWAVDGIRPDRWDLAGAAVTLAGMAIIAFAPRGAA
EEHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHEECCCCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA