| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120611501
Identifier: 120611501
GI number: 120611501
Start: 3116968
End: 3117390
Strand: Reverse
Name: 120611501
Synonym: Aave_2837
Alternate gene names: NA
Gene position: 3117390-3116968 (Counterclockwise)
Preceding gene: 120611502
Following gene: 120611500
Centisome position: 58.24
GC content: 52.25
Gene sequence:
>423_bases ATGCTGGATTTCTCTGACGATTGTTTTGAGACTTATATTCATGTGCCCATCCACCCGGACCGGGAGCCCATGATGAATGA TTATTATCGCCGTGTCCTGGGATTTTCGGGTGAGTACGGCGAATTCTGGGTGCGGGAGGACGGTTCGCTGAGGCTTCAGT TCAAGGACGTCAAAAATATCGATGAAATCAACAGGCTTGGAGCCCCCTCCCTCGCGAGCATTTTCATGCCAGGCGACTTC ATTGGCCTTTGCGATCGCTGGGTGCGTGCCGGGGCGAAAATCGAACTGCTCCTCCTCGATCCGGTCGGTTTCACTGCTGT TGTCGTTGATCCTGCAATGAACCGCCTCGAATTCAGAGGCGACAGCAATCCCGGAAATTCAGATGTCGATATAAGCGCCT GGGATTTTTTCAGAAGTCTCTGA
Upstream 100 bases:
>100_bases CTGGGTGTAAAGCCCATGAAGGGGAACTCCACTCACATCGCAGCAGCCCGGGCAGCTGCGAAACCCAGTGGAAGACCGCC GTCAAAAACAGGATGCTGAA
Downstream 100 bases:
>100_bases CGGCGGGTTGTGCAGGTGAAGCTGTCAACCGGATGACAGGTTCGGAGCAGGGTTGGATTTTTGATGATTTCATCCATTTT TCCCAATCTGTTTTTTCCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 140; Mature: 140
Protein sequence:
>140_residues MLDFSDDCFETYIHVPIHPDREPMMNDYYRRVLGFSGEYGEFWVREDGSLRLQFKDVKNIDEINRLGAPSLASIFMPGDF IGLCDRWVRAGAKIELLLLDPVGFTAVVVDPAMNRLEFRGDSNPGNSDVDISAWDFFRSL
Sequences:
>Translated_140_residues MLDFSDDCFETYIHVPIHPDREPMMNDYYRRVLGFSGEYGEFWVREDGSLRLQFKDVKNIDEINRLGAPSLASIFMPGDF IGLCDRWVRAGAKIELLLLDPVGFTAVVVDPAMNRLEFRGDSNPGNSDVDISAWDFFRSL >Mature_140_residues MLDFSDDCFETYIHVPIHPDREPMMNDYYRRVLGFSGEYGEFWVREDGSLRLQFKDVKNIDEINRLGAPSLASIFMPGDF IGLCDRWVRAGAKIELLLLDPVGFTAVVVDPAMNRLEFRGDSNPGNSDVDISAWDFFRSL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16030; Mature: 16030
Theoretical pI: Translated: 4.28; Mature: 4.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDFSDDCFETYIHVPIHPDREPMMNDYYRRVLGFSGEYGEFWVREDGSLRLQFKDVKNI CCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEECCCCCH DEINRLGAPSLASIFMPGDFIGLCDRWVRAGAKIELLLLDPVGFTAVVVDPAMNRLEFRG HHHHHCCCCCHHEEECCCCHHHHHHHHHHCCCEEEEEEECCCCCEEEEECCCCCCEEECC DSNPGNSDVDISAWDFFRSL CCCCCCCCCEEHHHHHHHCC >Mature Secondary Structure MLDFSDDCFETYIHVPIHPDREPMMNDYYRRVLGFSGEYGEFWVREDGSLRLQFKDVKNI CCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEECCCCCH DEINRLGAPSLASIFMPGDFIGLCDRWVRAGAKIELLLLDPVGFTAVVVDPAMNRLEFRG HHHHHCCCCCHHEEECCCCHHHHHHHHHHCCCEEEEEEECCCCCEEEEECCCCCCEEECC DSNPGNSDVDISAWDFFRSL CCCCCCCCCEEHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA