Definition Acidovorax citrulli AAC00-1 chromosome, complete genome.
Accession NC_008752
Length 5,352,772

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The map label for this gene is yedA [C]

Identifier: 120611489

GI number: 120611489

Start: 3100557

End: 3101462

Strand: Direct

Name: yedA [C]

Synonym: Aave_2825

Alternate gene names: 120611489

Gene position: 3100557-3101462 (Clockwise)

Preceding gene: 120611488

Following gene: 120611490

Centisome position: 57.92

GC content: 71.63

Gene sequence:

>906_bases
GTGAACGCGGCGGCCGGCGTGCTGCCTGCCCGCCACTGGATCGGTGAATTCCTGCTGCTTTCCGCCCTCTGGGGGGCGTC
GTTCCTCTTCATGCGCCTGGGCGCGTCCGAATTCGGGCCCCTGCCCACGGCGGGGCTGCGGGTGGCACTGGCCACCCTGT
TCCTCTGGCCCATCCTGCTGCGCCAGGGCCAGTGGCCCGCGCTGCGCCGCCACTGGAAGCCCATCCTGCTGGGCGGCGTC
ATCAATTCCGCCATTCCTTTCGCGCTCTATGCCTGGGCGGTGCTGCACATCACCACGGGGCTGTCTTCCATCCTGAATGC
CACCGTACCACTGTTCGGCGCCCTGGTGGCCTGGGTGTGGCTGGGCGACCGCATCGGCCGGCTGCGGTGGGCCGGACTGG
CGATCGGCTTCGCGGGCGTGGCGCTGCTGGCCTGGCGCGCGCCCGCGGCGGTCGGTTTCAAATCGGACCACGCCATCTGG
GCAGTCGGCGCCTGCCTGCTGGCCACCACCTGCTATGCGGTAGGCGCCAGCTACGCCCGGCGGCACCTGGTCGGGCTGCC
GCCGCTGGCCACCGCCACGGGCAGCCAGTTGGGCGCCACCCTCGCGCTCGCCCTGCCCGCGCTGTGGTCCTGGCCGGCGC
GGGCTCCGGGCCCCGGAGCCTGGGCCGCGGTGATCGCCATCGCCGTACTGTGCACGGGCATCGCCTACATCCTGTATTTC
CGGTTGATCGCACATGCCGGACCGAGCCGGGCGCTCGCCGTGACCTTCCTCGCCCCCGTGTTCGCGGTGGCCTACGGCGC
CCTGTTCCTGGGCGAATCGGTCACGCCGTGGATGGCCGGCTGCGGCGTGGTCATCGTATGCGGCACCATGCTGTCCACGG
GATTGGTGCGCCTGCGCGAACGTTGA

Upstream 100 bases:

>100_bases
TGGAAGGGGCTCTTGCGGACCGCCTGCGCACCTTGCCCCTCTGGCCGCAGGGCGACGCCACGGCCCGCGGCACCGGCGCC
CCGCGCACCGGGGCGGCGGC

Downstream 100 bases:

>100_bases
GCAGGACGGCGCGGCACGCTGCGCTGCATTAGCACGACAAATTGTGAGGCCGTGTCAGCAATTGACGCCATGATTGGTGC
GAGAGCGCCTAAACTCGGCC

Product: hypothetical protein

Products: NA

Alternate protein names: ABC Transporter Membrane Spanning Protein; Transmembrane Drug/Metabolite Transporter Family Protein; Permease Protein; DMT Family Permease; Transporter Drug/Metabolite Exporter Family; Transmembrane Protein; Integral Membrane; Permease; Transmembrane Component Of ABC Transporter; Transporter DME Family DMT Superfamily; Drug/Metabolite Exporter Family Protein; Transmembrane Drug/Metabolite Transporter; ABC Transporter; EamA Family Protein; Permease Of Drug/Metabolite Transporter Superfamily; Drug/Metabolite Transporter Superfamily Permease; DMT Transporter

Number of amino acids: Translated: 301; Mature: 301

Protein sequence:

>301_residues
MNAAAGVLPARHWIGEFLLLSALWGASFLFMRLGASEFGPLPTAGLRVALATLFLWPILLRQGQWPALRRHWKPILLGGV
INSAIPFALYAWAVLHITTGLSSILNATVPLFGALVAWVWLGDRIGRLRWAGLAIGFAGVALLAWRAPAAVGFKSDHAIW
AVGACLLATTCYAVGASYARRHLVGLPPLATATGSQLGATLALALPALWSWPARAPGPGAWAAVIAIAVLCTGIAYILYF
RLIAHAGPSRALAVTFLAPVFAVAYGALFLGESVTPWMAGCGVVIVCGTMLSTGLVRLRER

Sequences:

>Translated_301_residues
MNAAAGVLPARHWIGEFLLLSALWGASFLFMRLGASEFGPLPTAGLRVALATLFLWPILLRQGQWPALRRHWKPILLGGV
INSAIPFALYAWAVLHITTGLSSILNATVPLFGALVAWVWLGDRIGRLRWAGLAIGFAGVALLAWRAPAAVGFKSDHAIW
AVGACLLATTCYAVGASYARRHLVGLPPLATATGSQLGATLALALPALWSWPARAPGPGAWAAVIAIAVLCTGIAYILYF
RLIAHAGPSRALAVTFLAPVFAVAYGALFLGESVTPWMAGCGVVIVCGTMLSTGLVRLRER
>Mature_301_residues
MNAAAGVLPARHWIGEFLLLSALWGASFLFMRLGASEFGPLPTAGLRVALATLFLWPILLRQGQWPALRRHWKPILLGGV
INSAIPFALYAWAVLHITTGLSSILNATVPLFGALVAWVWLGDRIGRLRWAGLAIGFAGVALLAWRAPAAVGFKSDHAIW
AVGACLLATTCYAVGASYARRHLVGLPPLATATGSQLGATLALALPALWSWPARAPGPGAWAAVIAIAVLCTGIAYILYF
RLIAHAGPSRALAVTFLAPVFAVAYGALFLGESVTPWMAGCGVVIVCGTMLSTGLVRLRER

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31734; Mature: 31734

Theoretical pI: Translated: 11.24; Mature: 11.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAAAGVLPARHWIGEFLLLSALWGASFLFMRLGASEFGPLPTAGLRVALATLFLWPILL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHH
RQGQWPALRRHWKPILLGGVINSAIPFALYAWAVLHITTGLSSILNATVPLFGALVAWVW
HCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGDRIGRLRWAGLAIGFAGVALLAWRAPAAVGFKSDHAIWAVGACLLATTCYAVGASYAR
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
RHLVGLPPLATATGSQLGATLALALPALWSWPARAPGPGAWAAVIAIAVLCTGIAYILYF
HHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
RLIAHAGPSRALAVTFLAPVFAVAYGALFLGESVTPWMAGCGVVIVCGTMLSTGLVRLRE
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHHHHHHC
R
C
>Mature Secondary Structure
MNAAAGVLPARHWIGEFLLLSALWGASFLFMRLGASEFGPLPTAGLRVALATLFLWPILL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHH
RQGQWPALRRHWKPILLGGVINSAIPFALYAWAVLHITTGLSSILNATVPLFGALVAWVW
HCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGDRIGRLRWAGLAIGFAGVALLAWRAPAAVGFKSDHAIWAVGACLLATTCYAVGASYAR
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
RHLVGLPPLATATGSQLGATLALALPALWSWPARAPGPGAWAAVIAIAVLCTGIAYILYF
HHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
RLIAHAGPSRALAVTFLAPVFAVAYGALFLGESVTPWMAGCGVVIVCGTMLSTGLVRLRE
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHHHHHHC
R
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA