| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120611477
Identifier: 120611477
GI number: 120611477
Start: 3087267
End: 3087770
Strand: Reverse
Name: 120611477
Synonym: Aave_2813
Alternate gene names: NA
Gene position: 3087770-3087267 (Counterclockwise)
Preceding gene: 120611478
Following gene: 120611476
Centisome position: 57.69
GC content: 75.0
Gene sequence:
>504_bases ATGCCGATTCCAGCCGCCTCCACGGACCCGACCGCGCCATCGCCTTCCGCCGCGCAGCGTGCGCTGCCGCAAGGCCTGCG CTCCACGCGGGCCGTGCGGGCGGTGCTGGCGCTGATGGAGTCCGACCCCTCCGCCGCGCGCTCGGGCACGGAAGTCGTCG CGGCGCTGGAGCGGCGCGGCGTGCCGGCCAACCGTGTCACGGTCTATCGCCTGCTGGACCGCCTCGCCGTGGCCGGTCTG CTCGATCGCCATGTGGATGCGCAGCGCGTGACGCGCTATACGCTGGCGGGCAGTTCCAAAGAGCGCTGGGGCGCACGCTT CGAATGTGCCGAATGCCACCGCCAGTTTCGCGTCGCCGACGGGGCCGCGCCGCTGCGCGCCGCCGTGCGCCGCGTGCTCC AGGCCCTGGCGGAAGCCGGCCACGCCGAGCTGGCCGCGGACGTTTCCGTGCGCGGCCGGTGCGCGGAATGCGCGCACACC GTGGCCCGGGAGACCCGCGGATGA
Upstream 100 bases:
>100_bases ACCTCAAGCCCGAATAGCCACGGCCGGCCGCAGGCGTGCGGCTCGCATGCATAATGCAACACGATTGCATTAACAGGCTT GCATTGACAGGCCGCACGCC
Downstream 100 bases:
>100_bases TCCGGTCCCGAGGGCTGGAGTTCGCCCATCCCGGCGGCCCGTTCCTGCGTTTCCCCGACGTGGACCTGCCCCAGGGCGGC TGCCTGCTGCTGCGCGGGCC
Product: ferric uptake regulator family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 167; Mature: 166
Protein sequence:
>167_residues MPIPAASTDPTAPSPSAAQRALPQGLRSTRAVRAVLALMESDPSAARSGTEVVAALERRGVPANRVTVYRLLDRLAVAGL LDRHVDAQRVTRYTLAGSSKERWGARFECAECHRQFRVADGAAPLRAAVRRVLQALAEAGHAELAADVSVRGRCAECAHT VARETRG
Sequences:
>Translated_167_residues MPIPAASTDPTAPSPSAAQRALPQGLRSTRAVRAVLALMESDPSAARSGTEVVAALERRGVPANRVTVYRLLDRLAVAGL LDRHVDAQRVTRYTLAGSSKERWGARFECAECHRQFRVADGAAPLRAAVRRVLQALAEAGHAELAADVSVRGRCAECAHT VARETRG >Mature_166_residues PIPAASTDPTAPSPSAAQRALPQGLRSTRAVRAVLALMESDPSAARSGTEVVAALERRGVPANRVTVYRLLDRLAVAGLL DRHVDAQRVTRYTLAGSSKERWGARFECAECHRQFRVADGAAPLRAAVRRVLQALAEAGHAELAADVSVRGRCAECAHTV ARETRG
Specific function: Unknown
COG id: COG0735
COG function: function code P; Fe2+/Zn2+ uptake regulation proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17815; Mature: 17684
Theoretical pI: Translated: 10.96; Mature: 10.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIPAASTDPTAPSPSAAQRALPQGLRSTRAVRAVLALMESDPSAARSGTEVVAALERRG CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC VPANRVTVYRLLDRLAVAGLLDRHVDAQRVTRYTLAGSSKERWGARFECAECHRQFRVAD CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHCC GAAPLRAAVRRVLQALAEAGHAELAADVSVRGRCAECAHTVARETRG CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHCCC >Mature Secondary Structure PIPAASTDPTAPSPSAAQRALPQGLRSTRAVRAVLALMESDPSAARSGTEVVAALERRG CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC VPANRVTVYRLLDRLAVAGLLDRHVDAQRVTRYTLAGSSKERWGARFECAECHRQFRVAD CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHCC GAAPLRAAVRRVLQALAEAGHAELAADVSVRGRCAECAHTVARETRG CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA