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The map label for this gene is 120611475

Identifier: 120611475

GI number: 120611475

Start: 3085322

End: 3086590

Strand: Reverse

Name: 120611475

Synonym: Aave_2811

Alternate gene names: NA

Gene position: 3086590-3085322 (Counterclockwise)

Preceding gene: 120611476

Following gene: 120611474

Centisome position: 57.66

GC content: 73.36

Gene sequence:

>1269_bases
ATGAGTGCGCCGGCCCGCTTCGGCGAACTCCTGCGGCTGTCGTGGCGGTATCTCTGGTCGCGCCCGCTGGCATCGGCGCT
CAACCTGCTGCTGCTGACACTCGGGCTGGCCGCCGTGGTGCTGGTGCTGCTGGTGTCCGAGCAGGTGGACCGCGGCTTCG
AGCGCGACGTGCAGGGAATCGATCTGGTGGTCGGCGCCAAGGGCAGCCCGCTGCAGCTGATCCTGGCGGGCGTCTTCCAT
ATCGACGTGCCGCCCGGCAACATCGCGCTGCAGGATTTCGAGGCCCTGCAGCGCAATCCGCTCGTGGCGCAGGCGATTCC
CCTCAGCCTGGGCGACAGCTTCGCCGGCTACCGCATCGTCGGGACCACGCCGGAGTATCCCGCCCACTATGGCGCCGCAT
GGGCGGCCGGACGCGTCTGGAACCGGCCCATGGAGGCCGTGCTGGGCGCCACCGTGGCAGGGGCGATGCGGCGCGCTGCC
GGTGATGCCGGACGCGCCCTCGGCGGCGGGGCGGGCGGGCTGCTGGGGCAGTCCTTCGTCGGCACGCACGGCCTGGCGCC
GGGAGGGGAGGCGCATGGCGACAATCCCTATACGGTGGTGGGCGTGCTGCAGGCGTGCGGCTGCGTGCTCGACCGGCTGG
TGCTCACCGCCACGGAATCGGTGTGGAAGGTGCATGAATCCGCACAGGCCGACGACCCGGACGACCTGGAGGTGCTGCGC
CAGGAGCGCGAGGTCACGCTGGCCCTGGTGCGCTACCGCAGCCCCTTGGCGGCGGTGACGCTGCCGCGGGCCATCAACAG
CGGCACGCCCATGCAGGCCGCGTCGCCTGCGGTGGAGGTCACCCGGCTCGTGGGCCTGCTGGGCGTGGGGGCCGACGTGC
TGCGCGCCTTTGGCGGCGTGCTGCTGGGCGTGGCCGCGCTGAGCGTGTTCATCGCGCTGTGGAACGCGGTGCGCGAGCGC
CGTGCCGACCTCGCGATGCTGCGCATGCTGGGCACTCCGCCGGCCCGCGTGGGGGGGCTGCTGCTGTGCGAGGCGCTGTG
GCTCGCCCTGATCGCATCGCTGCTGGGCCTGGCCTGCGGGCACCTGCTGGCCGAAGGGGTGGGGCGCCTGCTGGCCGCGC
GCAATGCCCTGCCCGTGACCGGCTGGGTCTGGCTGCCCGGGGAATGGGCCGTTCCCGCGCTTGCCGCGGCGCTGGCCGTG
CTGGCCGCCTTGCTGCCGGCCCTGCAGGCCTACCGCGTCGATGCGGGCGAACTGCTGGGGCGGCAATGA

Upstream 100 bases:

>100_bases
TCGCCACGCACGACCGCCGCACGATCGACGCGCTCGCGCTCCGGGCCGTCACGGTGTCGCTGGAGCGGCCGGCGCGGCCC
CGGGCCGTGGAGGCCGGGTC

Downstream 100 bases:

>100_bases
ACTCCGCAGTCCGTTGACGCCTTTTTTGTTTTTCATTGTTCGAAAGGAACCTCCATGTACCGTACTTTCCGATCCGCCGC
CACCGCCCTGGCCTGCGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: Peptide ABC Transporter Permease; Efflux ABC Transporter Permease Protein; ABC Efflux Transporter Permease Protein; ABC-Type Transport System Permease Component; ABC Transporter Permease; ABC Transport System Permease Protein; Antimicrobial Peptide ABC Transporter Permease; Peptide ABC Transporter Permease Component; ABC Transporter Transmembrane Permease; Transmembrane Protein; ABC Transporter Membrane Protein; ABC Transporter Permease Protein

Number of amino acids: Translated: 422; Mature: 421

Protein sequence:

>422_residues
MSAPARFGELLRLSWRYLWSRPLASALNLLLLTLGLAAVVLVLLVSEQVDRGFERDVQGIDLVVGAKGSPLQLILAGVFH
IDVPPGNIALQDFEALQRNPLVAQAIPLSLGDSFAGYRIVGTTPEYPAHYGAAWAAGRVWNRPMEAVLGATVAGAMRRAA
GDAGRALGGGAGGLLGQSFVGTHGLAPGGEAHGDNPYTVVGVLQACGCVLDRLVLTATESVWKVHESAQADDPDDLEVLR
QEREVTLALVRYRSPLAAVTLPRAINSGTPMQAASPAVEVTRLVGLLGVGADVLRAFGGVLLGVAALSVFIALWNAVRER
RADLAMLRMLGTPPARVGGLLLCEALWLALIASLLGLACGHLLAEGVGRLLAARNALPVTGWVWLPGEWAVPALAAALAV
LAALLPALQAYRVDAGELLGRQ

Sequences:

>Translated_422_residues
MSAPARFGELLRLSWRYLWSRPLASALNLLLLTLGLAAVVLVLLVSEQVDRGFERDVQGIDLVVGAKGSPLQLILAGVFH
IDVPPGNIALQDFEALQRNPLVAQAIPLSLGDSFAGYRIVGTTPEYPAHYGAAWAAGRVWNRPMEAVLGATVAGAMRRAA
GDAGRALGGGAGGLLGQSFVGTHGLAPGGEAHGDNPYTVVGVLQACGCVLDRLVLTATESVWKVHESAQADDPDDLEVLR
QEREVTLALVRYRSPLAAVTLPRAINSGTPMQAASPAVEVTRLVGLLGVGADVLRAFGGVLLGVAALSVFIALWNAVRER
RADLAMLRMLGTPPARVGGLLLCEALWLALIASLLGLACGHLLAEGVGRLLAARNALPVTGWVWLPGEWAVPALAAALAV
LAALLPALQAYRVDAGELLGRQ
>Mature_421_residues
SAPARFGELLRLSWRYLWSRPLASALNLLLLTLGLAAVVLVLLVSEQVDRGFERDVQGIDLVVGAKGSPLQLILAGVFHI
DVPPGNIALQDFEALQRNPLVAQAIPLSLGDSFAGYRIVGTTPEYPAHYGAAWAAGRVWNRPMEAVLGATVAGAMRRAAG
DAGRALGGGAGGLLGQSFVGTHGLAPGGEAHGDNPYTVVGVLQACGCVLDRLVLTATESVWKVHESAQADDPDDLEVLRQ
EREVTLALVRYRSPLAAVTLPRAINSGTPMQAASPAVEVTRLVGLLGVGADVLRAFGGVLLGVAALSVFIALWNAVRERR
ADLAMLRMLGTPPARVGGLLLCEALWLALIASLLGLACGHLLAEGVGRLLAARNALPVTGWVWLPGEWAVPALAAALAVL
AALLPALQAYRVDAGELLGRQ

Specific function: Unknown

COG id: COG0577

COG function: function code V; ABC-type antimicrobial peptide transport system, permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44065; Mature: 43934

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAPARFGELLRLSWRYLWSRPLASALNLLLLTLGLAAVVLVLLVSEQVDRGFERDVQGI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCC
DLVVGAKGSPLQLILAGVFHIDVPPGNIALQDFEALQRNPLVAQAIPLSLGDSFAGYRIV
EEEEECCCCCHHHHHHHHHEEECCCCCCCHHHHHHHHCCCCHHHHCCHHCCCCCCCEEEE
GTTPEYPAHYGAAWAAGRVWNRPMEAVLGATVAGAMRRAAGDAGRALGGGAGGLLGQSFV
CCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHH
GTHGLAPGGEAHGDNPYTVVGVLQACGCVLDRLVLTATESVWKVHESAQADDPDDLEVLR
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
QEREVTLALVRYRSPLAAVTLPRAINSGTPMQAASPAVEVTRLVGLLGVGADVLRAFGGV
HHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHH
LLGVAALSVFIALWNAVRERRADLAMLRMLGTPPARVGGLLLCEALWLALIASLLGLACG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
HLLAEGVGRLLAARNALPVTGWVWLPGEWAVPALAAALAVLAALLPALQAYRVDAGELLG
HHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHCC
RQ
CC
>Mature Secondary Structure 
SAPARFGELLRLSWRYLWSRPLASALNLLLLTLGLAAVVLVLLVSEQVDRGFERDVQGI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCC
DLVVGAKGSPLQLILAGVFHIDVPPGNIALQDFEALQRNPLVAQAIPLSLGDSFAGYRIV
EEEEECCCCCHHHHHHHHHEEECCCCCCCHHHHHHHHCCCCHHHHCCHHCCCCCCCEEEE
GTTPEYPAHYGAAWAAGRVWNRPMEAVLGATVAGAMRRAAGDAGRALGGGAGGLLGQSFV
CCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHH
GTHGLAPGGEAHGDNPYTVVGVLQACGCVLDRLVLTATESVWKVHESAQADDPDDLEVLR
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
QEREVTLALVRYRSPLAAVTLPRAINSGTPMQAASPAVEVTRLVGLLGVGADVLRAFGGV
HHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHH
LLGVAALSVFIALWNAVRERRADLAMLRMLGTPPARVGGLLLCEALWLALIASLLGLACG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
HLLAEGVGRLLAARNALPVTGWVWLPGEWAVPALAAALAVLAALLPALQAYRVDAGELLG
HHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHCC
RQ
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA