Definition Acidovorax citrulli AAC00-1 chromosome, complete genome.
Accession NC_008752
Length 5,352,772

Click here to switch to the map view.

The map label for this gene is 120611440

Identifier: 120611440

GI number: 120611440

Start: 3050327

End: 3050707

Strand: Direct

Name: 120611440

Synonym: Aave_2776

Alternate gene names: NA

Gene position: 3050327-3050707 (Clockwise)

Preceding gene: 120611439

Following gene: 120611441

Centisome position: 56.99

GC content: 64.3

Gene sequence:

>381_bases
ATGAAAGAAGCGAAAGCAATGGTAGCGCTCGACGACCCGATCGGCGTAATTAACAGCCTGCAGTCGCAAATCGAGGACCT
CGAAGGCCGGTTGCGCTGCGCGAACGCGGCGGCCGGGGATCGCGATGCCAAGAACCTCGCTGACGGCATCCGGAGGTTAC
GCCTGCACGGCGTGATCCCGCTGTACGTCGGGCCCATGGACCAGGCTGCCCTGCAGGCCGAGGTCGCATCAACCTCGCCC
GAGCTTTCGGCCATTCTCGACCAGGTCTGGATGCTGTCGGCCGCGCCGGTGGCGCGCGAGGTGAGGAACTCGCTGGCTAT
AGCAGCCGGCAATGGAATGTCGCGCTGGGAGACGCGAGATCGAAAGGATGCCACCCGATGA

Upstream 100 bases:

>100_bases
TTGGCAACGACTATTGCCATCACGGAATTCCGCCTAAGTGGTGTCCGGTCGGCTGCGGCGACGTCGAGTGAAGGTGGCGC
ACAAGACATTCACCGGACTT

Downstream 100 bases:

>100_bases
GTGCTGCCGATGACCATGGCCCGGCTGGATTCGATGAGACGTTGTGGGCGCATCGGTGCGCAGAGCTCGCTGCGCGCGCT
CGCGGCCGCAGCGGAGCCGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 126; Mature: 126

Protein sequence:

>126_residues
MKEAKAMVALDDPIGVINSLQSQIEDLEGRLRCANAAAGDRDAKNLADGIRRLRLHGVIPLYVGPMDQAALQAEVASTSP
ELSAILDQVWMLSAAPVAREVRNSLAIAAGNGMSRWETRDRKDATR

Sequences:

>Translated_126_residues
MKEAKAMVALDDPIGVINSLQSQIEDLEGRLRCANAAAGDRDAKNLADGIRRLRLHGVIPLYVGPMDQAALQAEVASTSP
ELSAILDQVWMLSAAPVAREVRNSLAIAAGNGMSRWETRDRKDATR
>Mature_126_residues
MKEAKAMVALDDPIGVINSLQSQIEDLEGRLRCANAAAGDRDAKNLADGIRRLRLHGVIPLYVGPMDQAALQAEVASTSP
ELSAILDQVWMLSAAPVAREVRNSLAIAAGNGMSRWETRDRKDATR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13594; Mature: 13594

Theoretical pI: Translated: 5.91; Mature: 5.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEAKAMVALDDPIGVINSLQSQIEDLEGRLRCANAAAGDRDAKNLADGIRRLRLHGVIP
CCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCEE
LYVGPMDQAALQAEVASTSPELSAILDQVWMLSAAPVAREVRNSLAIAAGNGMSRWETRD
EEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHEEECCCCCCHHHCCC
RKDATR
CCCCCC
>Mature Secondary Structure
MKEAKAMVALDDPIGVINSLQSQIEDLEGRLRCANAAAGDRDAKNLADGIRRLRLHGVIP
CCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCEE
LYVGPMDQAALQAEVASTSPELSAILDQVWMLSAAPVAREVRNSLAIAAGNGMSRWETRD
EEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHEEECCCCCCHHHCCC
RKDATR
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA