| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120611430
Identifier: 120611430
GI number: 120611430
Start: 3039692
End: 3040222
Strand: Reverse
Name: 120611430
Synonym: Aave_2766
Alternate gene names: NA
Gene position: 3040222-3039692 (Counterclockwise)
Preceding gene: 120611431
Following gene: 120611429
Centisome position: 56.8
GC content: 68.36
Gene sequence:
>531_bases ATGCGCAGCATTGCGATGACGATCGCCGCCGCCACGCTCATCGGCGCTTCACCCGCGTTGGCGCAGGTGCGCACGGGCCG GACCGCAGAAGCGAGCTCGACTGCCTCGACATCGTCCACGTCGCGCACGCAGGCCGACTCCACGGACCTGCAGGTGCAGC AGATCTGGGGCCTGACGGCAGAAGAGATGCGCCGCGCCAAGGTGCTGGCACTCGGGCCACGCGGAAGCTTTTCCGTGGAC AAGCTCAGTCCGCTGGAGATCCTCGGGATCCATGCCCGCACTGATGCGGAGCGGCGTCAATACGCTGAGCGCCTGGCGCG GATCTTCCACGAGGACGTTGCGCGGTCCATTGCCTGGGAGCGCGAAATGGCCGCTGCCATGGCGCGGCTGTACCCCAACG AGCCCATGGTCAGCTACGAAGGTCTGCCGCGGGTGCAGAGTTCCGTGGGCGCCGCGGACGTCGCCAATGTGCCGCGTAGC CAGATCCTGGAGCAGCCGTCGCTTTCGCCGCGGGTGCCCGCCCGCCGATGA
Upstream 100 bases:
>100_bases GGCTCGCGCTCAAGTCCGCGGATCCCGTGTCGAAATCCGCGACGTTTGCCGCGCCTGGCAGCGCTGGCCTCACCCTCTAC GTGAGCCAGGGGGGATGACG
Downstream 100 bases:
>100_bases CGATGCAACGACGAAGCATTCTTCGCGCTGCTGCGTTGTTGGCCGGGCACCTGCCCGGCCTGGCCGCTGCTGCAGCGCAG GGCCGCGATGGCGCAGACGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 176; Mature: 176
Protein sequence:
>176_residues MRSIAMTIAAATLIGASPALAQVRTGRTAEASSTASTSSTSRTQADSTDLQVQQIWGLTAEEMRRAKVLALGPRGSFSVD KLSPLEILGIHARTDAERRQYAERLARIFHEDVARSIAWEREMAAAMARLYPNEPMVSYEGLPRVQSSVGAADVANVPRS QILEQPSLSPRVPARR
Sequences:
>Translated_176_residues MRSIAMTIAAATLIGASPALAQVRTGRTAEASSTASTSSTSRTQADSTDLQVQQIWGLTAEEMRRAKVLALGPRGSFSVD KLSPLEILGIHARTDAERRQYAERLARIFHEDVARSIAWEREMAAAMARLYPNEPMVSYEGLPRVQSSVGAADVANVPRS QILEQPSLSPRVPARR >Mature_176_residues MRSIAMTIAAATLIGASPALAQVRTGRTAEASSTASTSSTSRTQADSTDLQVQQIWGLTAEEMRRAKVLALGPRGSFSVD KLSPLEILGIHARTDAERRQYAERLARIFHEDVARSIAWEREMAAAMARLYPNEPMVSYEGLPRVQSSVGAADVANVPRS QILEQPSLSPRVPARR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19115; Mature: 19115
Theoretical pI: Translated: 10.50; Mature: 10.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSIAMTIAAATLIGASPALAQVRTGRTAEASSTASTSSTSRTQADSTDLQVQQIWGLTA CCHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCH EEMRRAKVLALGPRGSFSVDKLSPLEILGIHARTDAERRQYAERLARIFHEDVARSIAWE HHHHHHHEEEECCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH REMAAAMARLYPNEPMVSYEGLPRVQSSVGAADVANVPRSQILEQPSLSPRVPARR HHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCHHHHCCCHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MRSIAMTIAAATLIGASPALAQVRTGRTAEASSTASTSSTSRTQADSTDLQVQQIWGLTA CCHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCH EEMRRAKVLALGPRGSFSVDKLSPLEILGIHARTDAERRQYAERLARIFHEDVARSIAWE HHHHHHHEEEECCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH REMAAAMARLYPNEPMVSYEGLPRVQSSVGAADVANVPRSQILEQPSLSPRVPARR HHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCHHHHCCCHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA