| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120611427
Identifier: 120611427
GI number: 120611427
Start: 3036026
End: 3036790
Strand: Reverse
Name: 120611427
Synonym: Aave_2763
Alternate gene names: NA
Gene position: 3036790-3036026 (Counterclockwise)
Preceding gene: 120611428
Following gene: 120611426
Centisome position: 56.73
GC content: 68.1
Gene sequence:
>765_bases ATGACGCCGGCACCGCCTCCCAAGCCGCAAACCGTGGGACCCATCGGGCTCGCGTTCAGCGTCTCCTTCGGCCTCGTCAG CGTGGCCGTAGGCGCCTGGATCGTCGGCATGCTCATCGAGATCGGGGGCGGCTACTTCCTCTGGAAGGGCCAGGGGATTC GGCACGCCCAATCTCTGGTTCAGCAGGACCTGGAGTACATCGCGGCCGCGCCGCGCAGCCTTCTGGTGCGCGACACCGTG GCCTTCTCGCTGCAGCTTGCCGGCTGGGTGCGCATGCCCTACGAAAAGCTCGGCGTGCTGCGCTGGTACCAGCGCATGCA TGCACCGACCGCGGCAGCGCCGACGGCAATGCCGCTCACCGGCCAGACGGTCGCCCCCCAGCTGCGCGGGATTGGCGTGG CCACGACGGACGCCGCGCGCGTCCTGTCCGAATGGATCGTCATCAGCATGTTCGTGGCTCAGGACGTGCTGCTGCGCATG GCGATCGGCGCATTCGCCATGCCGGCCTTCGTGCTGGCCTGCCTCATCGGTGTGGTCGATGGCCTGGTGCGCCGCGACCG CCGGCGCTGGACCGGGGGCCGCGAGTCGTCCTTCGTCTACCACCACGCCAAACGCTATACCGGCTGGGCCCTCACGGGGG GATTCGGCCTCTACCTCTCTTGGCCGTTCGGCGGCTTCAACCCCGCGCACATGGTGCTGGTCTTCACGGTCCTGGTGGCC GTGACGCTCTCGACCACCGTGGGCGCTTTCAAAAAGTACGCATGA
Upstream 100 bases:
>100_bases ACGACGGTGATGACGACGCGGGCACTGCGGCAGTCCACGGCACGCACGGATCGGCGTTGTCGCACAGCGCGGTGATGGGC AACCTCATGGGTCACCAGCA
Downstream 100 bases:
>100_bases AGAAGGAGAAACCCATGAAACCCGCCCGCAAGCTCTTCGCCCTGATCGCGGCCGGCATCCTGGTCACCACGGCGACCGCC TGGGCCGGCGTGAGCGACGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 254; Mature: 253
Protein sequence:
>254_residues MTPAPPPKPQTVGPIGLAFSVSFGLVSVAVGAWIVGMLIEIGGGYFLWKGQGIRHAQSLVQQDLEYIAAAPRSLLVRDTV AFSLQLAGWVRMPYEKLGVLRWYQRMHAPTAAAPTAMPLTGQTVAPQLRGIGVATTDAARVLSEWIVISMFVAQDVLLRM AIGAFAMPAFVLACLIGVVDGLVRRDRRRWTGGRESSFVYHHAKRYTGWALTGGFGLYLSWPFGGFNPAHMVLVFTVLVA VTLSTTVGAFKKYA
Sequences:
>Translated_254_residues MTPAPPPKPQTVGPIGLAFSVSFGLVSVAVGAWIVGMLIEIGGGYFLWKGQGIRHAQSLVQQDLEYIAAAPRSLLVRDTV AFSLQLAGWVRMPYEKLGVLRWYQRMHAPTAAAPTAMPLTGQTVAPQLRGIGVATTDAARVLSEWIVISMFVAQDVLLRM AIGAFAMPAFVLACLIGVVDGLVRRDRRRWTGGRESSFVYHHAKRYTGWALTGGFGLYLSWPFGGFNPAHMVLVFTVLVA VTLSTTVGAFKKYA >Mature_253_residues TPAPPPKPQTVGPIGLAFSVSFGLVSVAVGAWIVGMLIEIGGGYFLWKGQGIRHAQSLVQQDLEYIAAAPRSLLVRDTVA FSLQLAGWVRMPYEKLGVLRWYQRMHAPTAAAPTAMPLTGQTVAPQLRGIGVATTDAARVLSEWIVISMFVAQDVLLRMA IGAFAMPAFVLACLIGVVDGLVRRDRRRWTGGRESSFVYHHAKRYTGWALTGGFGLYLSWPFGGFNPAHMVLVFTVLVAV TLSTTVGAFKKYA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27522; Mature: 27391
Theoretical pI: Translated: 10.66; Mature: 10.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPAPPPKPQTVGPIGLAFSVSFGLVSVAVGAWIVGMLIEIGGGYFLWKGQGIRHAQSLV CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHH QQDLEYIAAAPRSLLVRDTVAFSLQLAGWVRMPYEKLGVLRWYQRMHAPTAAAPTAMPLT HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC GQTVAPQLRGIGVATTDAARVLSEWIVISMFVAQDVLLRMAIGAFAMPAFVLACLIGVVD CCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLVRRDRRRWTGGRESSFVYHHAKRYTGWALTGGFGLYLSWPFGGFNPAHMVLVFTVLVA HHHHHHHHHCCCCCCCCHHHHHHHHCCCEEEECCEEEEEECCCCCCCHHHHHHHHHHHHH VTLSTTVGAFKKYA HHHHHHHHHHHHCC >Mature Secondary Structure TPAPPPKPQTVGPIGLAFSVSFGLVSVAVGAWIVGMLIEIGGGYFLWKGQGIRHAQSLV CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHH QQDLEYIAAAPRSLLVRDTVAFSLQLAGWVRMPYEKLGVLRWYQRMHAPTAAAPTAMPLT HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC GQTVAPQLRGIGVATTDAARVLSEWIVISMFVAQDVLLRMAIGAFAMPAFVLACLIGVVD CCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLVRRDRRRWTGGRESSFVYHHAKRYTGWALTGGFGLYLSWPFGGFNPAHMVLVFTVLVA HHHHHHHHHCCCCCCCCHHHHHHHHCCCEEEECCEEEEEECCCCCCCHHHHHHHHHHHHH VTLSTTVGAFKKYA HHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA