| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
Click here to switch to the map view.
The map label for this gene is 120611414
Identifier: 120611414
GI number: 120611414
Start: 3022694
End: 3024319
Strand: Reverse
Name: 120611414
Synonym: Aave_2750
Alternate gene names: NA
Gene position: 3024319-3022694 (Counterclockwise)
Preceding gene: 120611415
Following gene: 120611413
Centisome position: 56.5
GC content: 62.67
Gene sequence:
>1626_bases ATGCAGCTCGACAGCTACCTGGAGCTCTTCACCACCATGTATGGTTGGGCCTTCGCCAACATCATGGGCGAGATCATCAC CGGCACGGGCCTGGCCGCCCTGCCCTTCGCCCTCATCGTATTCAACGCCTGGCGTGAGGCCAAGGAGCAAGGCCAAGGCT TCCTTGGCGTGCTCGGGCTGCTGGAGTCGGTTCAAACGCGCCTGTACACCGCGCTCTTCGTGATGACCGTCTGCTTCGCG ACCACGCCGATCACCTCGCTGCACAACGTCAACCTGAGCTACACCCCGACGCGCTCGCTTGACAACAGCGAGCCTCAACC GGTGTCGCTCAAGAGCGGCACGCGCTCGAGCTACGACGTCGCAATGGCCGACGCCGTGTCGGGTGCGTTCAGCAAGGCAG GCAACCTCAGCTACGTGCCGGCCTGGTGGTACGCAGTCATGGGCATCTCGTCGGGCATCAACAGCGCGTTTCGCGCCGGA TTGAGCAGCTCCTCGCGCGACATCCGCGTCATCGAAGACATGGCGCGGATGGCGACGATCGAGGACCCGGGCCTGCTGCA CGATCTGCAGCGCTTCTACTCGGAATGCTTCATCCCTGCCCGCAGCCAGTACCTGGCCATGGACAAGGCGACGATTTCCA CGGCCGGCAAAGCCATCCTGGCCGAAGGCAGCAGCTACGGGCCCACCGACGTGGACTGGGTGGGGAGCCAATTCTTCCGG ACCGAGAAGGGCTTCTACAGCACCATCCGCTCGTACAACCCGGTGCCGGGCTGGCCGATCGATTTCGCCCGGGACACGGA CTACATCCAGACGCCGGCACCGGAGGGCACGCCCGAGGCGGGATACCAGAATCCGGACTGGGGACGGCCGACCTGCAAGG AGTGGTGGGAGTCGGGCACGATGGGCCTACGCGAGAAGCTCATCACCAACACCTCGGCCTGGCGAGGCCTCTCGCAGAAG GTCCAGAACACCCTTTCGTTCAAGTCGGCGGACGAGGCCAAGGACAGCGTGGCCCGGCTCGGCTTCGAGAAGGCCAATCC GGTGTTCGTGAGCCCGGAGCGGATCATGGGCGACGAGTACGGTGTGGGCACCAACACGTGGCGGACCGTGACTGGAGCGA TCAGCACATGGGGCGTCGCCAACAAAGCGCTGGACGCCTCGCTCGCCATGGTCCCGCTTTTGAATGCCCTGCCCATGGTC CAGGCCCTGGTGCTCATGGCCCTCTACATGTTTCTGCCGATGATCGTCTTCCTGAGCGGCTACGACCTCAAGGTGGCCTT CTACGGCACCCTGGCAATCTTCACGGTCAAGTTCTGGTCGGTACTCTGGTTCGTCGCGCGCTGGATCGACGCCCACCTCA TCGATGCTATGTACCCCGGTTTCAGCGGCTCCGCGATGATGCAGGAGATCACGCAGAGCTTCAGTTCCGGCCAGCCGCAG ATTTACAAGCGGATGCTGCTGAACACCCTGCTGATGATCATGTTTATTGGACTGCCACTCTTCTGGTCAGCGCTGCTTGG ATGGATCGGGTTCCATATGGGGGACCAATTCATGCTGAGCAGAGGAAATGACATGGCACTCGGTGCCGGAGCAGGCTCCA AATCGATCGTTTCTAGGCGCCGTTAG
Upstream 100 bases:
>100_bases TCTGGCGCTCTACCTGGTCACCGTGCCCATCGGGCCGGCGCGTCTGCTCCAGGGCGTGACCTTGTTCCTGGCCGTCCCGC AATCCTGATCGGAATCCACC
Downstream 100 bases:
>100_bases CGGCCATACATCTGCTGGTACGTGTTCAGGCTTTCAGCGCTGATTTTTCCTGCCGCATATGCCCACTCCGCGTCTTGCAC CGAGGCGATAGTGACCTCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 541; Mature: 541
Protein sequence:
>541_residues MQLDSYLELFTTMYGWAFANIMGEIITGTGLAALPFALIVFNAWREAKEQGQGFLGVLGLLESVQTRLYTALFVMTVCFA TTPITSLHNVNLSYTPTRSLDNSEPQPVSLKSGTRSSYDVAMADAVSGAFSKAGNLSYVPAWWYAVMGISSGINSAFRAG LSSSSRDIRVIEDMARMATIEDPGLLHDLQRFYSECFIPARSQYLAMDKATISTAGKAILAEGSSYGPTDVDWVGSQFFR TEKGFYSTIRSYNPVPGWPIDFARDTDYIQTPAPEGTPEAGYQNPDWGRPTCKEWWESGTMGLREKLITNTSAWRGLSQK VQNTLSFKSADEAKDSVARLGFEKANPVFVSPERIMGDEYGVGTNTWRTVTGAISTWGVANKALDASLAMVPLLNALPMV QALVLMALYMFLPMIVFLSGYDLKVAFYGTLAIFTVKFWSVLWFVARWIDAHLIDAMYPGFSGSAMMQEITQSFSSGQPQ IYKRMLLNTLLMIMFIGLPLFWSALLGWIGFHMGDQFMLSRGNDMALGAGAGSKSIVSRRR
Sequences:
>Translated_541_residues MQLDSYLELFTTMYGWAFANIMGEIITGTGLAALPFALIVFNAWREAKEQGQGFLGVLGLLESVQTRLYTALFVMTVCFA TTPITSLHNVNLSYTPTRSLDNSEPQPVSLKSGTRSSYDVAMADAVSGAFSKAGNLSYVPAWWYAVMGISSGINSAFRAG LSSSSRDIRVIEDMARMATIEDPGLLHDLQRFYSECFIPARSQYLAMDKATISTAGKAILAEGSSYGPTDVDWVGSQFFR TEKGFYSTIRSYNPVPGWPIDFARDTDYIQTPAPEGTPEAGYQNPDWGRPTCKEWWESGTMGLREKLITNTSAWRGLSQK VQNTLSFKSADEAKDSVARLGFEKANPVFVSPERIMGDEYGVGTNTWRTVTGAISTWGVANKALDASLAMVPLLNALPMV QALVLMALYMFLPMIVFLSGYDLKVAFYGTLAIFTVKFWSVLWFVARWIDAHLIDAMYPGFSGSAMMQEITQSFSSGQPQ IYKRMLLNTLLMIMFIGLPLFWSALLGWIGFHMGDQFMLSRGNDMALGAGAGSKSIVSRRR >Mature_541_residues MQLDSYLELFTTMYGWAFANIMGEIITGTGLAALPFALIVFNAWREAKEQGQGFLGVLGLLESVQTRLYTALFVMTVCFA TTPITSLHNVNLSYTPTRSLDNSEPQPVSLKSGTRSSYDVAMADAVSGAFSKAGNLSYVPAWWYAVMGISSGINSAFRAG LSSSSRDIRVIEDMARMATIEDPGLLHDLQRFYSECFIPARSQYLAMDKATISTAGKAILAEGSSYGPTDVDWVGSQFFR TEKGFYSTIRSYNPVPGWPIDFARDTDYIQTPAPEGTPEAGYQNPDWGRPTCKEWWESGTMGLREKLITNTSAWRGLSQK VQNTLSFKSADEAKDSVARLGFEKANPVFVSPERIMGDEYGVGTNTWRTVTGAISTWGVANKALDASLAMVPLLNALPMV QALVLMALYMFLPMIVFLSGYDLKVAFYGTLAIFTVKFWSVLWFVARWIDAHLIDAMYPGFSGSAMMQEITQSFSSGQPQ IYKRMLLNTLLMIMFIGLPLFWSALLGWIGFHMGDQFMLSRGNDMALGAGAGSKSIVSRRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59698; Mature: 59698
Theoretical pI: Translated: 6.17; Mature: 6.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLDSYLELFTTMYGWAFANIMGEIITGTGLAALPFALIVFNAWREAKEQGQGFLGVLGL CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH LESVQTRLYTALFVMTVCFATTPITSLHNVNLSYTPTRSLDNSEPQPVSLKSGTRSSYDV HHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCEECCCCCCCCCCCCCEEECCCCCCCCHH AMADAVSGAFSKAGNLSYVPAWWYAVMGISSGINSAFRAGLSSSSRDIRVIEDMARMATI HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCC EDPGLLHDLQRFYSECFIPARSQYLAMDKATISTAGKAILAEGSSYGPTDVDWVGSQFFR CCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHH TEKGFYSTIRSYNPVPGWPIDFARDTDYIQTPAPEGTPEAGYQNPDWGRPTCKEWWESGT HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCC MGLREKLITNTSAWRGLSQKVQNTLSFKSADEAKDSVARLGFEKANPVFVSPERIMGDEY HHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCEEECHHHHCCCCC GVGTNTWRTVTGAISTWGVANKALDASLAMVPLLNALPMVQALVLMALYMFLPMIVFLSG CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC YDLKVAFYGTLAIFTVKFWSVLWFVARWIDAHLIDAMYPGFSGSAMMQEITQSFSSGQPQ CCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHH IYKRMLLNTLLMIMFIGLPLFWSALLGWIGFHMGDQFMLSRGNDMALGAGAGSKSIVSRR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCEEEECCCCCHHHHHCC R C >Mature Secondary Structure MQLDSYLELFTTMYGWAFANIMGEIITGTGLAALPFALIVFNAWREAKEQGQGFLGVLGL CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH LESVQTRLYTALFVMTVCFATTPITSLHNVNLSYTPTRSLDNSEPQPVSLKSGTRSSYDV HHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCEECCCCCCCCCCCCCEEECCCCCCCCHH AMADAVSGAFSKAGNLSYVPAWWYAVMGISSGINSAFRAGLSSSSRDIRVIEDMARMATI HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCC EDPGLLHDLQRFYSECFIPARSQYLAMDKATISTAGKAILAEGSSYGPTDVDWVGSQFFR CCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHH TEKGFYSTIRSYNPVPGWPIDFARDTDYIQTPAPEGTPEAGYQNPDWGRPTCKEWWESGT HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCC MGLREKLITNTSAWRGLSQKVQNTLSFKSADEAKDSVARLGFEKANPVFVSPERIMGDEY HHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCEEECHHHHCCCCC GVGTNTWRTVTGAISTWGVANKALDASLAMVPLLNALPMVQALVLMALYMFLPMIVFLSG CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC YDLKVAFYGTLAIFTVKFWSVLWFVARWIDAHLIDAMYPGFSGSAMMQEITQSFSSGQPQ CCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHH IYKRMLLNTLLMIMFIGLPLFWSALLGWIGFHMGDQFMLSRGNDMALGAGAGSKSIVSRR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCEEEECCCCCHHHHHCC R C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA