| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
Click here to switch to the map view.
The map label for this gene is 120611366
Identifier: 120611366
GI number: 120611366
Start: 2965380
End: 2965982
Strand: Direct
Name: 120611366
Synonym: Aave_2700
Alternate gene names: NA
Gene position: 2965380-2965982 (Clockwise)
Preceding gene: 120611365
Following gene: 120611367
Centisome position: 55.4
GC content: 63.52
Gene sequence:
>603_bases ATGAACGACACCACCCTGTACCGCATCGAAGGCTTCGCCGATCTCTGGGTCGATGCTTGCCTTCGCGACGATGACGGAGA CCTGATGTTTCTGTCGTTCTACGGCCGTGACGCATCTGCCATGCAGTTCGTTGCGGCCGTGGAACTGGGGAGCAGAGCCG AGGCAGGTATCACCAGCTTCAATCTCATGAACGGAGCCGGCCGTCGCCACCAGGTCGGAATCGGCCCGACAGAACGACTG GCCAAGCACAGCGGGCGATTGCCGCGGCAGAACCTGTTCGGACCGCTGTCGCAAACCTGGATCTACGACAAGCGGATGCG AGAGGTCGACAAGGCCAACCGCATCGGTTGGATCGTGAGCCACACGGATCAGCCGATCGATGCTGCGGCCTGGGAACTGC TCAAGGAGCTTTCACCGGTCGCATTGCTCGACACCTGGCAGCGGCCGCTGATGGCGTGGGCCCGGGAGAAGGGCGCCATG GCGGCGCTCGGCACCGGGCTCTACGAACCCATCGGTCGGGCGACTGCCGTGCGCGTCAGCGTGACCGACCATTTCGTACG GCACGTCAGTGCTTGTGTGCGGTCAGGCGTTCTCACCGCCTGA
Upstream 100 bases:
>100_bases GCGTGGGTGTTCGTCCCCTCCGGGGAGTGACGCTCTTCTTTCTCCAACCCTCTGCGGGGCACGCCCCGGAGGGCGGCTCC GCATCTTTCCGGAGCCATCC
Downstream 100 bases:
>100_bases GCACCTAACGGACGGCCCTGCAGCAGCAGGGTCACCTTTCTTCAACCGCATGAGCGATCTCCCGATCTCGGGCGATCGCT CTTTTCATTTCTGGAGCAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 200; Mature: 200
Protein sequence:
>200_residues MNDTTLYRIEGFADLWVDACLRDDDGDLMFLSFYGRDASAMQFVAAVELGSRAEAGITSFNLMNGAGRRHQVGIGPTERL AKHSGRLPRQNLFGPLSQTWIYDKRMREVDKANRIGWIVSHTDQPIDAAAWELLKELSPVALLDTWQRPLMAWAREKGAM AALGTGLYEPIGRATAVRVSVTDHFVRHVSACVRSGVLTA
Sequences:
>Translated_200_residues MNDTTLYRIEGFADLWVDACLRDDDGDLMFLSFYGRDASAMQFVAAVELGSRAEAGITSFNLMNGAGRRHQVGIGPTERL AKHSGRLPRQNLFGPLSQTWIYDKRMREVDKANRIGWIVSHTDQPIDAAAWELLKELSPVALLDTWQRPLMAWAREKGAM AALGTGLYEPIGRATAVRVSVTDHFVRHVSACVRSGVLTA >Mature_200_residues MNDTTLYRIEGFADLWVDACLRDDDGDLMFLSFYGRDASAMQFVAAVELGSRAEAGITSFNLMNGAGRRHQVGIGPTERL AKHSGRLPRQNLFGPLSQTWIYDKRMREVDKANRIGWIVSHTDQPIDAAAWELLKELSPVALLDTWQRPLMAWAREKGAM AALGTGLYEPIGRATAVRVSVTDHFVRHVSACVRSGVLTA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22176; Mature: 22176
Theoretical pI: Translated: 7.63; Mature: 7.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDTTLYRIEGFADLWVDACLRDDDGDLMFLSFYGRDASAMQFVAAVELGSRAEAGITSF CCCCEEEEECCHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHCCCCCCCCCCEE NLMNGAGRRHQVGIGPTERLAKHSGRLPRQNLFGPLSQTWIYDKRMREVDKANRIGWIVS ECCCCCCCCEECCCCHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHCCEEEEE HTDQPIDAAAWELLKELSPVALLDTWQRPLMAWAREKGAMAALGTGLYEPIGRATAVRVS CCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEH VTDHFVRHVSACVRSGVLTA HHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MNDTTLYRIEGFADLWVDACLRDDDGDLMFLSFYGRDASAMQFVAAVELGSRAEAGITSF CCCCEEEEECCHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHCCCCCCCCCCEE NLMNGAGRRHQVGIGPTERLAKHSGRLPRQNLFGPLSQTWIYDKRMREVDKANRIGWIVS ECCCCCCCCEECCCCHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHCCEEEEE HTDQPIDAAAWELLKELSPVALLDTWQRPLMAWAREKGAMAALGTGLYEPIGRATAVRVS CCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEH VTDHFVRHVSACVRSGVLTA HHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA