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The map label for this gene is pdtaR [H]

Identifier: 120610824

GI number: 120610824

Start: 2360151

End: 2360777

Strand: Reverse

Name: pdtaR [H]

Synonym: Aave_2149

Alternate gene names: 120610824

Gene position: 2360777-2360151 (Counterclockwise)

Preceding gene: 120610826

Following gene: 120610822

Centisome position: 44.1

GC content: 70.18

Gene sequence:

>627_bases
ATGAACGAGTCGCTGCGCATCGTGGTGGTGGCCCCGGACCTGTCCACGCCCGGGGAGGAGGACGAGCATGCCCAGGAGCA
GGCCGAGCGTTCGCGCGCGTTGCGCATCGGCCTGCTGGAAAACGGTTTCAACCTGGTGGCGACGCTGCCGGCGGACGTGT
TCCTGAGCGAGCGCATCGCCCAGTTGCAGCCCGACATGGTGATCGTGGACGCGGAAAGCGCCGCGCGCGATGCGCTGGAG
CATGTGGTCATGGCCACGCGCGAGGCGCCCCGCCCCATCGTGCTGTTCACCAACGACGAGGACACCTCCCACGTGCGGGA
CGCCGTGGCCGCGGGCGTGACCGCCTACATCGTGGCCGGGCTCGCGCCGCAGCGCATCCGCCCCATCCTGGACGTGGCGA
TGGCGCGCTTCCAGCACGAGCAGGCCCTGAAGGCCGAACTGGCCGACGCCCGCGGCGCGCTGCAGGACCGCAAGACCATC
GACCGCGCCAAGGGCCTGCTCATGCAGCGCCACGGCCTCACGGAGCAGGCCGCCTACGACAAGCTGCGCAAGCTCGCGAT
GGACAAGGGCCTGAAGCTGGCGGAAGTCGCCCAGCGCATGCTCGATGCCTTCGAGCTGCTGGGCTGA

Upstream 100 bases:

>100_bases
CGCACGCTATCGGGTAACTCCGGTTTGATAGCAAGTTTCAATCCCGGCACGACGCGGCCTTTGCACCAATTTGGCGTGTT
TCTTGCTGTAGGCTGGGCGT

Downstream 100 bases:

>100_bases
CAGGGGGCGACTGCCGAGCAGAGGCTACATCAGTCCCTTGGTCTTCTCTTTCACCATCTTCTTGTAGAGCTCATAGACGG
CCTTGCCCTCGTGGGGGGTC

Product: response regulator receiver/ANTAR domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 208; Mature: 208

Protein sequence:

>208_residues
MNESLRIVVVAPDLSTPGEEDEHAQEQAERSRALRIGLLENGFNLVATLPADVFLSERIAQLQPDMVIVDAESAARDALE
HVVMATREAPRPIVLFTNDEDTSHVRDAVAAGVTAYIVAGLAPQRIRPILDVAMARFQHEQALKAELADARGALQDRKTI
DRAKGLLMQRHGLTEQAAYDKLRKLAMDKGLKLAEVAQRMLDAFELLG

Sequences:

>Translated_208_residues
MNESLRIVVVAPDLSTPGEEDEHAQEQAERSRALRIGLLENGFNLVATLPADVFLSERIAQLQPDMVIVDAESAARDALE
HVVMATREAPRPIVLFTNDEDTSHVRDAVAAGVTAYIVAGLAPQRIRPILDVAMARFQHEQALKAELADARGALQDRKTI
DRAKGLLMQRHGLTEQAAYDKLRKLAMDKGLKLAEVAQRMLDAFELLG
>Mature_208_residues
MNESLRIVVVAPDLSTPGEEDEHAQEQAERSRALRIGLLENGFNLVATLPADVFLSERIAQLQPDMVIVDAESAARDALE
HVVMATREAPRPIVLFTNDEDTSHVRDAVAAGVTAYIVAGLAPQRIRPILDVAMARFQHEQALKAELADARGALQDRKTI
DRAKGLLMQRHGLTEQAAYDKLRKLAMDKGLKLAEVAQRMLDAFELLG

Specific function: Member of the two-component regulatory system pdtaR/pdtaS [H]

COG id: COG3707

COG function: function code T; Response regulator with putative antiterminator output domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005561
- InterPro:   IPR011006
- InterPro:   IPR008327
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF03861 ANTAR; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 22867; Mature: 22867

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: PS50921 ANTAR ; PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNESLRIVVVAPDLSTPGEEDEHAQEQAERSRALRIGLLENGFNLVATLPADVFLSERIA
CCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHEEHHCCCEEEEECCHHHHHHHHHH
QLQPDMVIVDAESAARDALEHVVMATREAPRPIVLFTNDEDTSHVRDAVAAGVTAYIVAG
HCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHC
LAPQRIRPILDVAMARFQHEQALKAELADARGALQDRKTIDRAKGLLMQRHGLTEQAAYD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
KLRKLAMDKGLKLAEVAQRMLDAFELLG
HHHHHHHHCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNESLRIVVVAPDLSTPGEEDEHAQEQAERSRALRIGLLENGFNLVATLPADVFLSERIA
CCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHEEHHCCCEEEEECCHHHHHHHHHH
QLQPDMVIVDAESAARDALEHVVMATREAPRPIVLFTNDEDTSHVRDAVAAGVTAYIVAG
HCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHC
LAPQRIRPILDVAMARFQHEQALKAELADARGALQDRKTIDRAKGLLMQRHGLTEQAAYD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
KLRKLAMDKGLKLAEVAQRMLDAFELLG
HHHHHHHHCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]